RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 FAM186BQ8IYM0 893 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 DAW1Q8N136 415 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 XXYLT1Q8NBI6 393 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 SMRP1Q8NCR6 262 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 GLG1Q92896 1179 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 GPR20Q99678 358 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 C2orf40Q9H1Z8 148 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 AGPAT3Q9NRZ7 376 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 ERAP1Q9NZ08 941 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 CEP72Q9P209 647 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 PYCARDQ9ULZ3 195 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 COL1A2P08123 1366 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 WDR81Q562E7 1941 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 CCDC169A6NNP5 214 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 SFI1A8K8P3 1242 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 ZBTB39O15060 712 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 TGFB1I1O43294 461 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 ZNF862O60290 1169 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 SORBS3O60504 671 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 EXOC3O60645 756 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 MAFO75444 373 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-234ENST00000642041 BMPR1AP36894 532 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 NDUFV1P49821 464 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 CASP5P51878 434 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 PEX3P56589 373 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 POU5F1BQ06416 359 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 UGCGQ16739 394 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 ZNF484Q5JVG2 852 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 UTP14CQ5TAP6 766 aaKnown RBP18.67■□□□□ 0.58
PHGDH-234ENST00000642041 GBP6Q6ZN66 633 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 CACNA2D4Q7Z3S7 1137 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 ATP8B4Q8TF62 1192 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 MYO1AQ9UBC5 1043 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 ZNF215Q9UL58 517 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-234ENST00000642041 TBX20Q9UMR3 447 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 PLAGL2Q9UPG8 496 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 RWDD3Q9Y3V2 267 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 ZNF292O60281 2723 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 DMXL1Q9Y485 3027 aa18.67■□□□□ 0.58
PHGDH-234ENST00000642041 GTF2H1P32780 548 aa18.66■□□□□ 0.58
PHGDH-234ENST00000642041 NPTX2P47972 431 aa18.66■□□□□ 0.58
PHGDH-234ENST00000642041 PSEN2P49810 448 aa18.66■□□□□ 0.58
PHGDH-234ENST00000642041 ADKP55263 362 aaKnown RBP18.66■□□□□ 0.58
PHGDH-234ENST00000642041 KCNH2Q12809 1159 aa18.66■□□□□ 0.58
PHGDH-234ENST00000642041 TFDP1Q14186 410 aa18.66■□□□□ 0.58
PHGDH-234ENST00000642041 EMC2Q15006 297 aa18.66■□□□□ 0.58
PHGDH-234ENST00000642041 TARBP2Q15633 366 aaKnown RBP18.66■□□□□ 0.58
PHGDH-234ENST00000642041 MEA1Q16626 185 aa18.66■□□□□ 0.58
PHGDH-234ENST00000642041 DGKDQ16760 1214 aa18.66■□□□□ 0.58
PHGDH-234ENST00000642041 CEP135Q66GS9 1140 aa18.66■□□□□ 0.58
PHGDH-234ENST00000642041 ZNF662Q6ZS27 426 aa18.66■□□□□ 0.58
PHGDH-234ENST00000642041 FIBCD1Q8N539 461 aa18.66■□□□□ 0.58
PHGDH-234ENST00000642041 SEPT8Q92599 483 aa18.66■□□□□ 0.58
PHGDH-234ENST00000642041 NKD2Q969F2 451 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-234ENST00000642041 KATNAL1Q9BW62 490 aa18.66■□□□□ 0.58
PHGDH-234ENST00000642041 PHF7Q9BWX1 381 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-234ENST00000642041 BCAS3Q9H6U6 928 aa18.66■□□□□ 0.58
PHGDH-234ENST00000642041 MMRN2Q9H8L6 949 aa18.66■□□□□ 0.58
PHGDH-234ENST00000642041 CLEC1BQ9P126 229 aa18.66■□□□□ 0.58
PHGDH-234ENST00000642041 SIK3Q9Y2K2 1263 aa18.66■□□□□ 0.58
PHGDH-234ENST00000642041 DOCK5Q9H7D0 1870 aa18.66■□□□□ 0.58
PHGDH-234ENST00000642041 NCOR2Q9Y618 2525 aa18.65■□□□□ 0.58
PHGDH-234ENST00000642041 TTC26A0AVF1 554 aa18.65■□□□□ 0.58
PHGDH-234ENST00000642041 KRT37O76014 449 aa18.65■□□□□ 0.58
PHGDH-234ENST00000642041 LINC00271P0C7V0 271 aa18.65■□□□□ 0.58
PHGDH-234ENST00000642041 HOXD13P35453 343 aa18.65■□□□□ 0.58
PHGDH-234ENST00000642041 NPEPPSP55786 919 aa18.65■□□□□ 0.58
PHGDH-234ENST00000642041 TUBB2AQ13885 445 aa18.65■□□□□ 0.58
PHGDH-234ENST00000642041 EXOC3L4Q17RC7 722 aa18.65■□□□□ 0.58
PHGDH-234ENST00000642041 HSDL1Q3SXM5 330 aa18.65■□□□□ 0.58
PHGDH-234ENST00000642041 TMEM161BQ8NDZ6 487 aa18.65■□□□□ 0.58
PHGDH-234ENST00000642041 KIF18AQ8NI77 898 aa18.65■□□□□ 0.58
PHGDH-234ENST00000642041 CPLX3Q8WVH0 158 aa18.65■□□□□ 0.58
PHGDH-234ENST00000642041 RIPOR3Q96MK2 946 aa18.65■□□□□ 0.58
PHGDH-234ENST00000642041 TUBB2BQ9BVA1 445 aa18.65■□□□□ 0.58
PHGDH-234ENST00000642041 IFIH1Q9BYX4 1025 aaKnown RBP18.65■□□□□ 0.58
PHGDH-234ENST00000642041 TTYH3Q9C0H2 523 aa18.65■□□□□ 0.58
PHGDH-234ENST00000642041 ARHGAP28Q9P2N2 729 aa18.65■□□□□ 0.58
PHGDH-234ENST00000642041 EP300Q09472 2414 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-234ENST00000642041 KMT2BQ9UMN6 2715 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-234ENST00000642041 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-234ENST00000642041 HAS3O00219 553 aa18.64■□□□□ 0.57
PHGDH-234ENST00000642041 HOXD8P13378 290 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-234ENST00000642041 TMOD1P28289 359 aa18.64■□□□□ 0.57
PHGDH-234ENST00000642041 ARL2P36404 184 aa18.64■□□□□ 0.57
PHGDH-234ENST00000642041 ZNF200P98182 395 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-234ENST00000642041 POU5F1Q01860 360 aaKnown RBP18.64■□□□□ 0.57
PHGDH-234ENST00000642041 MFSD10Q14728 455 aa18.64■□□□□ 0.57
PHGDH-234ENST00000642041 MTERF2Q49AM1 385 aa18.64■□□□□ 0.57
PHGDH-234ENST00000642041 TMEM139Q8IV31 216 aa18.64■□□□□ 0.57
PHGDH-234ENST00000642041 EHBP1Q8NDI1 1231 aa18.64■□□□□ 0.57
PHGDH-234ENST00000642041 GLIS3Q8NEA6 775 aa18.64■□□□□ 0.57
PHGDH-234ENST00000642041 DEPTORQ8TB45 409 aa18.64■□□□□ 0.57
PHGDH-234ENST00000642041 PPP2R3CQ969Q6 453 aa18.64■□□□□ 0.57
PHGDH-234ENST00000642041 SSU72P8A0A1W2PR75 194 aa18.63■□□□□ 0.57
PHGDH-234ENST00000642041 MED19A0JLT2 244 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-234ENST00000642041 DENND3A2RUS2 1198 aa18.63■□□□□ 0.57
PHGDH-234ENST00000642041 AKAP3O75969 853 aa18.63■□□□□ 0.57
PHGDH-234ENST00000642041 PIGRP01833 764 aa18.63■□□□□ 0.57
PHGDH-234ENST00000642041 THPOP40225 353 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms