RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 ZNF263O14978 683 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 PJA2O43164 708 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 AMHP03971 560 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 SERPING1P05155 500 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 SRGAP2CP0DJJ0 459 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 ZSCAN20P17040 1043 aaPredicted RBP11.11□□□□□ -0.63
PHGDH-224ENST00000641711 ANXA13P27216 316 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 NMT1P30419 496 aaKnown RBP11.11□□□□□ -0.63
PHGDH-224ENST00000641711 PSMC2P35998 433 aaKnown RBP11.11□□□□□ -0.63
PHGDH-224ENST00000641711 EIF4A3P38919 411 aaKnown RBP11.11□□□□□ -0.63
PHGDH-224ENST00000641711 NPTX2P47972 431 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 KIF11P52732 1056 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 NCKAP1LP55160 1127 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 PEX3P56589 373 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 MCCD1P59942 119 aaPredicted RBP11.11□□□□□ -0.63
PHGDH-224ENST00000641711 WDR5P61964 334 aaKnown RBP11.11□□□□□ -0.63
PHGDH-224ENST00000641711 SNRPFP62306 86 aaKnown RBP11.11□□□□□ -0.63
PHGDH-224ENST00000641711 MBTD1Q05BQ5 628 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 KCNA1Q09470 495 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 KIF5AQ12840 1032 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 DSC3Q14574 896 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 ERCC6LQ2NKX8 1250 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 CCDC122Q5T0U0 273 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 SFMBT2Q5VUG0 894 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 HGSNATQ68CP4 663 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 NOTUMQ6P988 496 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 CHRDL2Q6WN34 429 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 C16orf59Q7L2K0 433 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 HS2ST1Q7LGA3 356 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 C12orf56Q8IXR9 622 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 BSNDQ8WZ55 320 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 RABGGTAQ92696 567 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 SLC35C1Q96A29 364 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 CCDC113Q9H0I3 377 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 GBP3Q9H0R5 595 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 FZD8Q9H461 694 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 ELAC1Q9H777 363 aaKnown RBP11.11□□□□□ -0.63
PHGDH-224ENST00000641711 CDHR5Q9HBB8 845 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 KMT5AQ9NQR1 393 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 DAAM1Q9Y4D1 1078 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 PCDHA13Q9Y5I0 950 aa11.11□□□□□ -0.63
PHGDH-224ENST00000641711 CITO14578 2027 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 ANO9A1A5B4 782 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 DENND3A2RUS2 1198 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 RCCD1A6NED2 376 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 INO80B-WBP1J3KQ70 363 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 ACKR2O00590 384 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 HOXA2O43364 376 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 PRKCBP05771 671 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 PLEKP08567 350 aaPredicted RBP11.1□□□□□ -0.63
PHGDH-224ENST00000641711 STAG3L1P0CL83 205 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 ACRP10323 421 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 EPHB4P54760 987 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 POLR2FP61218 127 aaKnown RBP11.1□□□□□ -0.63
PHGDH-224ENST00000641711 NFX1Q12986 1120 aaKnown RBP11.1□□□□□ -0.63
PHGDH-224ENST00000641711 AMHR2Q16671 573 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 LRIT3Q3SXY7 679 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 PAPD7Q5XG87 772 aaKnown RBP11.1□□□□□ -0.63
PHGDH-224ENST00000641711 GBP6Q6ZN66 633 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 SLC24A5Q71RS6 500 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 MAEAQ7L5Y9 396 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 TRAPPC11Q7Z392 1133 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 KSR1Q8IVT5 923 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 GPR161Q8N6U8 529 aaKnown RBP11.1□□□□□ -0.63
PHGDH-224ENST00000641711 TMEM161BQ8NDZ6 487 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 CCDC94Q9BW85 323 aaPredicted RBP11.1□□□□□ -0.63
PHGDH-224ENST00000641711 LACRTQ9GZZ8 138 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 TMEM206Q9H813 350 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 AGPAT3Q9NRZ7 376 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 RGS18Q9NS28 235 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 TRIM10Q9UDY6 481 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.1□□□□□ -0.63
PHGDH-224ENST00000641711 GUCA1BQ9UMX6 200 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 SLC4A7Q9Y6M7 1214 aa11.1□□□□□ -0.63
PHGDH-224ENST00000641711 V9GYY5 206 aaPredicted RBP11.1□□□□□ -0.63
PHGDH-224ENST00000641711 ATP8B3O60423 1300 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 ADGRA3Q8IWK6 1321 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 GBF1Q92538 1859 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 TMEM265A0A087WTH1 108 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 CARNS1A5YM72 827 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 CCDC169A6NNP5 214 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 ZBBXA8MT70 800 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 C9IYK1 514 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 K7ENM7 598 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 K7ERI5 159 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 MAPK13O15264 365 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 AKR1B10O60218 316 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 TSPAN1O60635 241 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 ZNF623O75123 536 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 PIGRP01833 764 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 PON1P27169 355 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 CASP4P49662 377 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 GTF2BQ00403 316 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 STRN3Q13033 797 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 EXOC3L4Q17RC7 722 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 DCAF4L1Q3SXM0 396 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 ZC2HC1CQ53FD0 456 aaPredicted RBP11.09□□□□□ -0.63
PHGDH-224ENST00000641711 KLHDC7AQ5VTJ3 777 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 FBXO38Q6PIJ6 1188 aa11.09□□□□□ -0.63
PHGDH-224ENST00000641711 ZPBP2Q6X784 338 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms