RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	TSSK4	Q6SA08	328 aa		11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	HACE1	Q8IYU2	909 aa		11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	SLC7A14	Q8TBB6	771 aa		11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	PIK3R5	Q8WYR1	880 aa		11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	TNFRSF25	Q93038	417 aa		11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	TTPAL	Q9BTX7	342 aa		11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	DDX23	Q9BUQ8	820 aa	Known RBP	11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	SNTG2	Q9NY99	539 aa		11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	TFIP11	Q9UBB9	837 aa	Known RBP	11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	TRIP11	Q15643	1979 aa		11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	CACNA1B	Q00975	2339 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587		A0A1B0GUA9	196 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	FAM170B	A6NMN3	283 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	LAMTOR5	O43504	91 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	DGAT1	O75907	488 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	RECQL4	O94761	1208 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	C1R	P00736	705 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	TARS	P26639	723 aa	Known RBP	11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	CREM	Q03060	361 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	CSTF1	Q05048	431 aa	Known RBP	11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	POU5F1B	Q06416	359 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	NBR1	Q14596	966 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	STK38	Q15208	465 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	NAB2	Q15742	525 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	SLC44A4	Q53GD3	710 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	TTC38	Q5R3I4	469 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	RSPO2	Q6UXX9	243 aa	Predicted RBP	11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	NPAS3	Q8IXF0	933 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	GPR65	Q8IYL9	337 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	SHD	Q96IW2	340 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	CNTNAP3B	Q96NU0	1288 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	HSD17B14	Q9BPX1	270 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	NFKBIZ	Q9BYH8	718 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	CNTNAP3	Q9BZ76	1288 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	PLA2G2F	Q9BZM2	168 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	PDZD7	Q9H5P4	517 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	LTB4R2	Q9NPC1	389 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	DNMT3B	Q9UBC3	853 aa	Known RBP	11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	CFAP45	Q9UL16	551 aa		11.04	□□□□□ -0.64
PHGDH-222	ENST00000641587	ZFHX4	Q86UP3	3567 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	NRG2	O14511	850 aa	Predicted RBP	11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	KRT37	O76014	449 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	LYPLA2	O95372	231 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	OR1D2	P34982	312 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	TRAPPC10	P48553	1259 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	SLC5A9	Q2M3M2	681 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	GLRA4	Q5JXX5	417 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	VARS2	Q5ST30	1063 aa	Known RBP	11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	EEF1DP3	Q658K8	133 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	ATL3	Q6DD88	541 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	TPRG1	Q6ZUI0	275 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	MTSS1L	Q765P7	747 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	SLFN12	Q8IYM2	578 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	BSND	Q8WZ55	320 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	SPATA32	Q96LK8	384 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	CCDC43	Q96MW1	224 aa	Known RBP	11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	USP28	Q96RU2	1077 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	BCO2	Q9BYV7	579 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	GDPD2	Q9HCC8	539 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	ANKEF1	Q9NU02	776 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	NCDN	Q9UBB6	729 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	ZMYM2	Q9UBW7	1377 aa		11.03	□□□□□ -0.64
PHGDH-222	ENST00000641587	TPR	P12270	2363 aa	Known RBP	11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	SHISA7	A6NL88	538 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587		I3L4J1	428 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	TH	P07101	528 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	CEBPB	P17676	345 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	LIG1	P18858	919 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	HOXA9	P31269	272 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	MCM7	P33993	719 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	TXK	P42681	527 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	PRKCQ	Q04759	706 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	SF3A1	Q15459	793 aa	Known RBP	11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	ZNF174	Q15697	407 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	CALCRL	Q16602	461 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	ZNF528	Q3MIS6	628 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	PABPC1L	Q4VXU2	614 aa	Known RBP	11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	PPP4R3CP	Q6ZMV5	832 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	MCRS1	Q96EZ8	462 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	KIFC3	Q9BVG8	833 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	TTC12	Q9H892	705 aa	Predicted RBP	11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	GOLGA2P5	Q9HBQ8	144 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	POLD4	Q9HCU8	107 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	HEBP1	Q9NRV9	189 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	FBXO4	Q9UKT5	387 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	PCDHA12	Q9UN75	941 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	SMG5	Q9UPR3	1016 aa	Known RBP	11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	GDA	Q9Y2T3	454 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	PCDHB6	Q9Y5E3	794 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	CLIC4	Q9Y696	253 aa		11.02	□□□□□ -0.65
PHGDH-222	ENST00000641587	COL4A2	P08572	1712 aa		11.01	□□□□□ -0.65
PHGDH-222	ENST00000641587	SPTLC1	O15269	473 aa		11.01	□□□□□ -0.65
PHGDH-222	ENST00000641587	XYLB	O75191	536 aa		11.01	□□□□□ -0.65
PHGDH-222	ENST00000641587	SPATA31C1	P0DKV0	1188 aa		11.01	□□□□□ -0.65
PHGDH-222	ENST00000641587	TKT	P29401	623 aa	Known RBP	11.01	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms