RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 C8orf34Q49A92 452 aa18.34■□□□□ 0.53
PHGDH-213ENST00000641272 KRT79Q5XKE5 535 aa18.34■□□□□ 0.53
PHGDH-213ENST00000641272 MCTP1Q6DN14 999 aa18.34■□□□□ 0.53
PHGDH-213ENST00000641272 PARM1Q6UWI2 310 aa18.34■□□□□ 0.53
PHGDH-213ENST00000641272 CD300LGQ6UXG3 332 aa18.34■□□□□ 0.53
PHGDH-213ENST00000641272 ITFG1Q8TB96 612 aa18.34■□□□□ 0.53
PHGDH-213ENST00000641272 FGF14Q92915 247 aa18.34■□□□□ 0.53
PHGDH-213ENST00000641272 PLIN2Q99541 437 aa18.34■□□□□ 0.53
PHGDH-213ENST00000641272 ACO2Q99798 780 aaKnown RBP18.34■□□□□ 0.53
PHGDH-213ENST00000641272 RTP3Q9BQQ7 232 aa18.34■□□□□ 0.53
PHGDH-213ENST00000641272 CCDC94Q9BW85 323 aaPredicted RBP18.34■□□□□ 0.53
PHGDH-213ENST00000641272 RAB34Q9BZG1 259 aa18.34■□□□□ 0.53
PHGDH-213ENST00000641272 WNT16Q9UBV4 365 aa18.34■□□□□ 0.53
PHGDH-213ENST00000641272 PROB1E7EW31 1015 aa18.33■□□□□ 0.52
PHGDH-213ENST00000641272 ANHXE9PGG2 379 aa18.33■□□□□ 0.52
PHGDH-213ENST00000641272 SLC16A4O15374 487 aa18.33■□□□□ 0.52
PHGDH-213ENST00000641272 XYLBO75191 536 aa18.33■□□□□ 0.52
PHGDH-213ENST00000641272 C1RP00736 705 aa18.33■□□□□ 0.52
PHGDH-213ENST00000641272 HNRNPA1P09651 372 aaKnown RBP eCLIP18.33■□□□□ 0.52
PHGDH-213ENST00000641272 FGFR3P22607 806 aa18.33■□□□□ 0.52
PHGDH-213ENST00000641272 GRM5P41594 1212 aa18.33■□□□□ 0.52
PHGDH-213ENST00000641272 YARSP54577 528 aaKnown RBP18.33■□□□□ 0.52
PHGDH-213ENST00000641272 AXDND1Q5T1B0 1012 aaPredicted RBP18.33■□□□□ 0.52
PHGDH-213ENST00000641272 APBB1IPQ7Z5R6 666 aaPredicted RBP18.33■□□□□ 0.52
PHGDH-213ENST00000641272 TMEM130Q8N3G9 435 aa18.33■□□□□ 0.52
PHGDH-213ENST00000641272 SNX27Q96L92 541 aa18.33■□□□□ 0.52
PHGDH-213ENST00000641272 MMTAG2Q9BU76 263 aaKnown RBP18.33■□□□□ 0.52
PHGDH-213ENST00000641272 MRPL4Q9BYD3 311 aaKnown RBP18.33■□□□□ 0.52
PHGDH-213ENST00000641272 FOXQ1Q9C009 403 aa18.33■□□□□ 0.52
PHGDH-213ENST00000641272 KMT5AQ9NQR1 393 aa18.33■□□□□ 0.52
PHGDH-213ENST00000641272 ARHGAP28Q9P2N2 729 aa18.33■□□□□ 0.52
PHGDH-213ENST00000641272 ANKFY1Q9P2R3 1169 aa18.33■□□□□ 0.52
PHGDH-213ENST00000641272 CDH7Q9ULB5 785 aa18.33■□□□□ 0.52
PHGDH-213ENST00000641272 DNM3Q9UQ16 869 aa18.33■□□□□ 0.52
PHGDH-213ENST00000641272 SMIM28A0A1B0GU29 152 aa18.32■□□□□ 0.52
PHGDH-213ENST00000641272 SFI1A8K8P3 1242 aa18.32■□□□□ 0.52
PHGDH-213ENST00000641272 DCNP07585 359 aaKnown RBP18.32■□□□□ 0.52
PHGDH-213ENST00000641272 CACNB1Q02641 598 aaPredicted RBP18.32■□□□□ 0.52
PHGDH-213ENST00000641272 UPP1Q16831 310 aa18.32■□□□□ 0.52
PHGDH-213ENST00000641272 SEZ6Q53EL9 994 aa18.32■□□□□ 0.52
PHGDH-213ENST00000641272 RINT1Q6NUQ1 792 aa18.32■□□□□ 0.52
PHGDH-213ENST00000641272 PDXDC1Q6P996 788 aa18.32■□□□□ 0.52
PHGDH-213ENST00000641272 FGF13Q92913 245 aa18.32■□□□□ 0.52
PHGDH-213ENST00000641272 DRC1Q96MC2 740 aa18.32■□□□□ 0.52
PHGDH-213ENST00000641272 ZMAT2Q96NC0 199 aaKnown RBP18.32■□□□□ 0.52
PHGDH-213ENST00000641272 KXD1Q9BQD3 176 aa18.32■□□□□ 0.52
PHGDH-213ENST00000641272 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.32■□□□□ 0.52
PHGDH-213ENST00000641272 TOPORSQ9NS56 1045 aaPredicted RBP18.32■□□□□ 0.52
PHGDH-213ENST00000641272 PODXLO00592 558 aa18.31■□□□□ 0.52
PHGDH-213ENST00000641272 HOXA9P31269 272 aa18.31■□□□□ 0.52
PHGDH-213ENST00000641272 ARPP19P56211 112 aa18.31■□□□□ 0.52
PHGDH-213ENST00000641272 RAB33AQ14088 237 aa18.31■□□□□ 0.52
PHGDH-213ENST00000641272 PDIA5Q14554 519 aa18.31■□□□□ 0.52
PHGDH-213ENST00000641272 PABPC1LQ4VXU2 614 aaKnown RBP18.31■□□□□ 0.52
PHGDH-213ENST00000641272 DCLRE1AQ6PJP8 1040 aa18.31■□□□□ 0.52
PHGDH-213ENST00000641272 DTHD1Q6ZMT9 781 aa18.31■□□□□ 0.52
PHGDH-213ENST00000641272 NKD2Q969F2 451 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-213ENST00000641272 NXPE3Q969Y0 559 aa18.31■□□□□ 0.52
PHGDH-213ENST00000641272 C18orf25Q96B23 403 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-213ENST00000641272 ZBTB45Q96K62 511 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-213ENST00000641272 UROC1Q96N76 676 aa18.31■□□□□ 0.52
PHGDH-213ENST00000641272 TCHPQ9BT92 498 aa18.31■□□□□ 0.52
PHGDH-213ENST00000641272 CFAP54Q96N23 3096 aa18.3■□□□□ 0.52
PHGDH-213ENST00000641272 ABLIM1O14639 778 aa18.3■□□□□ 0.52
PHGDH-213ENST00000641272 MEFVO15553 781 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-213ENST00000641272 LRRN2O75325 713 aa18.3■□□□□ 0.52
PHGDH-213ENST00000641272 ROR1Q01973 937 aa18.3■□□□□ 0.52
PHGDH-213ENST00000641272 VARS2Q5ST30 1063 aaKnown RBP18.3■□□□□ 0.52
PHGDH-213ENST00000641272 MPZL3Q6UWV2 235 aa18.3■□□□□ 0.52
PHGDH-213ENST00000641272 C1orf186Q6ZWK4 172 aa18.3■□□□□ 0.52
PHGDH-213ENST00000641272 NPAS3Q8IXF0 933 aa18.3■□□□□ 0.52
PHGDH-213ENST00000641272 PNMA5Q96PV4 448 aa18.3■□□□□ 0.52
PHGDH-213ENST00000641272 PTPRHQ9HD43 1115 aa18.3■□□□□ 0.52
PHGDH-213ENST00000641272 DNMT3BQ9UBC3 853 aaKnown RBP18.3■□□□□ 0.52
PHGDH-213ENST00000641272 STK24Q9Y6E0 443 aa18.3■□□□□ 0.52
PHGDH-213ENST00000641272 DMDP11532 3685 aa18.3■□□□□ 0.52
PHGDH-213ENST00000641272 PATJQ8NI35 1801 aa18.29■□□□□ 0.52
PHGDH-213ENST00000641272 NPHP3-ACAD11A0A0J9YXS1 232 aa18.29■□□□□ 0.52
PHGDH-213ENST00000641272 WDR27A2RRH5 827 aa18.29■□□□□ 0.52
PHGDH-213ENST00000641272 VWA3AA6NCI4 1184 aa18.29■□□□□ 0.52
PHGDH-213ENST00000641272 LAD1O00515 517 aa18.29■□□□□ 0.52
PHGDH-213ENST00000641272 TRAPPC3O43617 180 aa18.29■□□□□ 0.52
PHGDH-213ENST00000641272 MCF2P10911 925 aa18.29■□□□□ 0.52
PHGDH-213ENST00000641272 PRPHP41219 470 aa18.29■□□□□ 0.52
PHGDH-213ENST00000641272 GPC5P78333 572 aa18.29■□□□□ 0.52
PHGDH-213ENST00000641272 SLC5A9Q2M3M2 681 aa18.29■□□□□ 0.52
PHGDH-213ENST00000641272 ANKS3Q6ZW76 656 aa18.29■□□□□ 0.52
PHGDH-213ENST00000641272 TMEM134Q9H6X4 195 aa18.29■□□□□ 0.52
PHGDH-213ENST00000641272 SLC2A4RGQ9NR83 387 aa18.29■□□□□ 0.52
PHGDH-213ENST00000641272 TUBGCP4Q9UGJ1 667 aa18.29■□□□□ 0.52
PHGDH-213ENST00000641272 NUB1Q9Y5A7 615 aa18.29■□□□□ 0.52
PHGDH-213ENST00000641272 R4GN57 208 aa18.29■□□□□ 0.52
PHGDH-213ENST00000641272 VPS13AQ96RL7 3174 aa18.29■□□□□ 0.52
PHGDH-213ENST00000641272 CD2BP2O95400 341 aaKnown RBP18.28■□□□□ 0.52
PHGDH-213ENST00000641272 CEBPBP17676 345 aa18.28■□□□□ 0.52
PHGDH-213ENST00000641272 PROZP22891 400 aa18.28■□□□□ 0.52
PHGDH-213ENST00000641272 ATP2C1P98194 919 aaPredicted RBP18.28■□□□□ 0.52
PHGDH-213ENST00000641272 SPAG1Q07617 926 aa18.28■□□□□ 0.52
PHGDH-213ENST00000641272 NOLC1Q14978 699 aaKnown RBP eCLIP18.28■□□□□ 0.52
PHGDH-213ENST00000641272 XKR4Q5GH76 650 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms