RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 FCGRTP55899 365 aa18.92■□□□□ 0.62
PCF11-207ENST00000624931 FAM178BQ8IXR5 827 aa18.92■□□□□ 0.62
PCF11-207ENST00000624931 UBLCP1Q8WVY7 318 aaPredicted RBP18.92■□□□□ 0.62
PCF11-207ENST00000624931 HES6Q96HZ4 224 aa18.92■□□□□ 0.62
PCF11-207ENST00000624931 AZI2Q9H6S1 392 aa18.92■□□□□ 0.62
PCF11-207ENST00000624931 PPANQ9NQ55 473 aaKnown RBP18.92■□□□□ 0.62
PCF11-207ENST00000624931 TYW1Q9NV66 732 aaKnown RBP18.92■□□□□ 0.62
PCF11-207ENST00000624931 MYO1FO00160 1098 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 ZNF286BP0CG31 522 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 ZNF865P0CJ78 1059 aaPredicted RBP18.91■□□□□ 0.62
PCF11-207ENST00000624931 MAP2K2P36507 400 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 JAM2P57087 298 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 RNASE9P60153 205 aaKnown RBP18.91■□□□□ 0.62
PCF11-207ENST00000624931 NFIL3Q16649 462 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 GKAP1Q5VSY0 366 aaPredicted RBP18.91■□□□□ 0.62
PCF11-207ENST00000624931 TMC3Q7Z5M5 1100 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 CCDC13Q8IYE1 715 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 KIFC3Q9BVG8 833 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 KDM4CQ9H3R0 1056 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 EMSYQ7Z589 1322 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 GOLGA6L10A0A0M3HER8 536 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 K7ENM7 598 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 PPFIA2O75334 1257 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 TRPA1O75762 1119 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 PLS3P13797 630 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 HSPA6P17066 643 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 DRG2P55039 364 aaKnown RBP18.91■□□□□ 0.62
PCF11-207ENST00000624931 LAMC2Q13753 1193 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 EMC2Q15006 297 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 DUSP28Q4G0W2 176 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 NT5DC3Q86UY8 548 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 OR6J1Q8NGC5 347 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 CCDC114Q96M63 670 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 CENPHQ9H3R5 247 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 ATP6V0A4Q9HBG4 840 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 PDLIM7Q9NR12 457 aa18.91■□□□□ 0.62
PCF11-207ENST00000624931 DDX20Q9UHI6 824 aaKnown RBP18.91■□□□□ 0.62
PCF11-207ENST00000624931 NCANO14594 1321 aa18.9■□□□□ 0.62
PCF11-207ENST00000624931 LGALS2P05162 132 aa18.9■□□□□ 0.62
PCF11-207ENST00000624931 TMEM253P0C7T8 217 aa18.9■□□□□ 0.62
PCF11-207ENST00000624931 PEX3P56589 373 aa18.9■□□□□ 0.62
PCF11-207ENST00000624931 PRKCZQ05513 592 aa18.9■□□□□ 0.62
PCF11-207ENST00000624931 TRADDQ15628 312 aa18.9■□□□□ 0.62
PCF11-207ENST00000624931 OLFML2BQ68BL8 750 aa18.9■□□□□ 0.62
PCF11-207ENST00000624931 ZNF720Q7Z2F6 126 aa18.9■□□□□ 0.62
PCF11-207ENST00000624931 VTI1AQ96AJ9 217 aa18.9■□□□□ 0.62
PCF11-207ENST00000624931 TMEM143Q96AN5 459 aa18.9■□□□□ 0.62
PCF11-207ENST00000624931 ZBTB10Q96DT7 871 aa18.9■□□□□ 0.62
PCF11-207ENST00000624931 SEC16BQ96JE7 1060 aa18.9■□□□□ 0.62
PCF11-207ENST00000624931 NIFKQ9BYG3 293 aaKnown RBP18.9■□□□□ 0.62
PCF11-207ENST00000624931 POLR3FQ9H1D9 316 aaPredicted RBP18.9■□□□□ 0.62
PCF11-207ENST00000624931 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.9■□□□□ 0.62
PCF11-207ENST00000624931 RNF186Q9NXI6 227 aa18.9■□□□□ 0.62
PCF11-207ENST00000624931 SEL1LQ9UBV2 794 aa18.9■□□□□ 0.62
PCF11-207ENST00000624931 DGAT1O75907 488 aa18.89■□□□□ 0.61
PCF11-207ENST00000624931 SLC9A1P19634 815 aa18.89■□□□□ 0.61
PCF11-207ENST00000624931 POLGP54098 1239 aaPredicted RBP18.89■□□□□ 0.61
PCF11-207ENST00000624931 TNFAIP2Q03169 654 aa18.89■□□□□ 0.61
PCF11-207ENST00000624931 BYSLQ13895 437 aaKnown RBP18.89■□□□□ 0.61
PCF11-207ENST00000624931 DHX34Q14147 1143 aaKnown RBP18.89■□□□□ 0.61
PCF11-207ENST00000624931 TARBP2Q15633 366 aaKnown RBP18.89■□□□□ 0.61
PCF11-207ENST00000624931 GPIHBP1Q8IV16 184 aa18.89■□□□□ 0.61
PCF11-207ENST00000624931 PPTC7Q8NI37 304 aa18.89■□□□□ 0.61
PCF11-207ENST00000624931 TRAPPC12Q8WVT3 735 aa18.89■□□□□ 0.61
PCF11-207ENST00000624931 TATDN2Q93075 761 aa18.89■□□□□ 0.61
PCF11-207ENST00000624931 TLCD1Q96CP7 247 aa18.89■□□□□ 0.61
PCF11-207ENST00000624931 NOVA2Q9UNW9 492 aaKnown RBP18.89■□□□□ 0.61
PCF11-207ENST00000624931 ZBTB42B2RXF5 422 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 F8VZ95 297 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 SLC16A4O15374 487 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 IGHA2P01877 340 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 NUDT17P0C025 328 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 ENOX2Q16206 610 aaKnown RBP18.88■□□□□ 0.61
PCF11-207ENST00000624931 DAAM2Q86T65 1068 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 TRPV1Q8NER1 839 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 RFFLQ8WZ73 363 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 TRIB2Q92519 343 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 EMID1Q96A84 441 aaPredicted RBP18.88■□□□□ 0.61
PCF11-207ENST00000624931 TIPINQ9BVW5 301 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 AP1M1Q9BXS5 423 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 DDX47Q9H0S4 455 aaKnown RBP18.88■□□□□ 0.61
PCF11-207ENST00000624931 CARD9Q9H257 536 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 SLC40A1Q9NP59 571 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 RASAL2Q9UJF2 1139 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 CCDC169A6NNP5 214 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 EIF3DO15371 548 aaKnown RBP eCLIP18.88■□□□□ 0.61
PCF11-207ENST00000624931 DAPK3O43293 454 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 MMP3P08254 477 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 FLT3LGP49771 235 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 PTENP60484 403 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 POU5F1Q01860 360 aaKnown RBP18.88■□□□□ 0.61
PCF11-207ENST00000624931 DHX9Q08211 1270 aaKnown RBP18.88■□□□□ 0.61
PCF11-207ENST00000624931 TRIM32Q13049 653 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 KRT71Q3SY84 523 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 IQSEC1Q6DN90 963 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 PLPPR4Q7Z2D5 763 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 SLC30A5Q8TAD4 765 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 ASAP3Q8TDY4 903 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 ATP8B4Q8TF62 1192 aa18.88■□□□□ 0.61
PCF11-207ENST00000624931 RAPGEF5Q92565 580 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms