RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 PPP3CAQ08209 521 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 TMEM62Q0P6H9 643 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 RAPGEF1Q13905 1077 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 SNX17Q15036 470 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 MEA1Q16626 185 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 CBWD6Q4V339 395 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 WDR81Q562E7 1941 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 CBWD3Q5JTY5 395 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 CBWD5Q5RIA9 395 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 PDXDC1Q6P996 788 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 SV2AQ7L0J3 742 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 JAKMIP2Q96AA8 810 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 TMEM117Q9H0C3 514 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 CDT1Q9H211 546 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 PDZD7Q9H5P4 517 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 MINDY3Q9H8M7 445 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 NLRC4Q9NPP4 1024 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 STARD7Q9NQZ5 370 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 CHST12Q9NRB3 414 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 AIPL1Q9NZN9 384 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 COQ4Q9Y3A0 265 aa13.77□□□□□ -0.21
ZNF548-210ENST00000600442 LRRC53A6NM62 1247 aa13.76□□□□□ -0.21
ZNF548-210ENST00000600442 B4GALT5O43286 388 aa13.76□□□□□ -0.21
ZNF548-210ENST00000600442 XPOTO43592 962 aaKnown RBP13.76□□□□□ -0.21
ZNF548-210ENST00000600442 AKR1B10O60218 316 aa13.76□□□□□ -0.21
ZNF548-210ENST00000600442 B4GALT4O60513 344 aa13.76□□□□□ -0.21
ZNF548-210ENST00000600442 STAG3L1P0CL83 205 aa13.76□□□□□ -0.21
ZNF548-210ENST00000600442 TBXAS1P24557 533 aaPredicted RBP13.76□□□□□ -0.21
ZNF548-210ENST00000600442 THPOP40225 353 aa13.76□□□□□ -0.21
ZNF548-210ENST00000600442 GRM5P41594 1212 aa13.76□□□□□ -0.21
ZNF548-210ENST00000600442 DLG4P78352 724 aa13.76□□□□□ -0.21
ZNF548-210ENST00000600442 IRX5P78411 483 aaPredicted RBP13.76□□□□□ -0.21
ZNF548-210ENST00000600442 KLHL30Q0D2K2 578 aa13.76□□□□□ -0.21
ZNF548-210ENST00000600442 AMHR2Q16671 573 aa13.76□□□□□ -0.21
ZNF548-210ENST00000600442 TRIM60Q495X7 471 aa13.76□□□□□ -0.21
ZNF548-210ENST00000600442 TDRD12Q587J7 1177 aaKnown RBP13.76□□□□□ -0.21
ZNF548-210ENST00000600442 DNTTIP2Q5QJE6 756 aaKnown RBP13.76□□□□□ -0.21
ZNF548-210ENST00000600442 GDF6Q6KF10 455 aaPredicted RBP13.76□□□□□ -0.21
ZNF548-210ENST00000600442 MAFAQ8NHW3 353 aaPredicted RBP13.76□□□□□ -0.21
ZNF548-210ENST00000600442 DNAI2Q9GZS0 605 aa13.76□□□□□ -0.21
ZNF548-210ENST00000600442 GANQ9H2C0 597 aa13.76□□□□□ -0.21
ZNF548-210ENST00000600442 TTYH1Q9H313 450 aaPredicted RBP13.76□□□□□ -0.21
ZNF548-210ENST00000600442 PDE11AQ9HCR9 933 aa13.76□□□□□ -0.21
ZNF548-210ENST00000600442 UBE2TQ9NPD8 197 aaPredicted RBP13.76□□□□□ -0.21
ZNF548-210ENST00000600442 DNAJC12Q9UKB3 198 aa13.76□□□□□ -0.21
ZNF548-210ENST00000600442 PYCARDQ9ULZ3 195 aa13.76□□□□□ -0.21
ZNF548-210ENST00000600442 PIN4Q9Y237 131 aaKnown RBP13.76□□□□□ -0.21
ZNF548-210ENST00000600442 MROH7Q68CQ1 1323 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 SSU72P8A0A1W2PR75 194 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 TRIM43BA6NCK2 446 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 RPS6KA5O75582 802 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 GFPT2O94808 682 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 IQCF3P0C7M6 154 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 SKIP12755 728 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 P4HA1P13674 534 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 ZSCAN20P17040 1043 aaPredicted RBP13.75□□□□□ -0.21
ZNF548-210ENST00000600442 BPIFB4P59827 614 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 YWHAEP62258 255 aaKnown RBP13.75□□□□□ -0.21
ZNF548-210ENST00000600442 ZNF200P98182 395 aaPredicted RBP13.75□□□□□ -0.21
ZNF548-210ENST00000600442 TFAMQ00059 246 aaKnown RBP13.75□□□□□ -0.21
ZNF548-210ENST00000600442 GOLGA8FQ08AF8 430 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 GOLGA8DPQ0D2H9 430 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 SGSM1Q2NKQ1 1148 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 ZACNQ401N2 412 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 EPC2Q52LR7 807 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 C10orf76Q5T2E6 689 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 CRELD2Q6UXH1 353 aaPredicted RBP13.75□□□□□ -0.21
ZNF548-210ENST00000600442 CCAR2Q8N163 923 aaKnown RBP13.75□□□□□ -0.21
ZNF548-210ENST00000600442 MYLIPQ8WY64 445 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 BAP1Q92560 729 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 TAF4BQ92750 862 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 TRIM43Q96BQ3 446 aaPredicted RBP13.75□□□□□ -0.21
ZNF548-210ENST00000600442 CPB2Q96IY4 423 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 NHEJ1Q9H9Q4 299 aaPredicted RBP13.75□□□□□ -0.21
ZNF548-210ENST00000600442 SPTLC3Q9NUV7 552 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 PHF24Q9UPV7 400 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 DERAQ9Y315 318 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 CDY2AQ9Y6F7 541 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 EPN1Q9Y6I3 576 aaPredicted RBP13.75□□□□□ -0.21
ZNF548-210ENST00000600442 SQORQ9Y6N5 450 aa13.75□□□□□ -0.21
ZNF548-210ENST00000600442 A0A1W2PQ45 241 aaPredicted RBP13.74□□□□□ -0.21
ZNF548-210ENST00000600442 A0A1W2PQY0 241 aa13.74□□□□□ -0.21
ZNF548-210ENST00000600442 TLR3O15455 904 aaKnown RBP13.74□□□□□ -0.21
ZNF548-210ENST00000600442 CSDE1O75534 798 aaKnown RBP13.74□□□□□ -0.21
ZNF548-210ENST00000600442 NOL4O94818 638 aa13.74□□□□□ -0.21
ZNF548-210ENST00000600442 NDUFA10O95299 355 aa13.74□□□□□ -0.21
ZNF548-210ENST00000600442 ACTN1P12814 892 aa13.74□□□□□ -0.21
ZNF548-210ENST00000600442 SOX5P35711 763 aa13.74□□□□□ -0.21
ZNF548-210ENST00000600442 SMAD3P84022 425 aaKnown RBP13.74□□□□□ -0.21
ZNF548-210ENST00000600442 GCNT1Q02742 428 aa13.74□□□□□ -0.21
ZNF548-210ENST00000600442 NCOA4Q13772 614 aa13.74□□□□□ -0.21
ZNF548-210ENST00000600442 EEF1DP3Q658K8 133 aa13.74□□□□□ -0.21
ZNF548-210ENST00000600442 KIAA1328Q86T90 577 aa13.74□□□□□ -0.21
ZNF548-210ENST00000600442 PPM1KQ8N3J5 372 aa13.74□□□□□ -0.21
ZNF548-210ENST00000600442 FAXDC2Q96IV6 333 aa13.74□□□□□ -0.21
ZNF548-210ENST00000600442 POP1Q99575 1024 aaKnown RBP13.74□□□□□ -0.21
ZNF548-210ENST00000600442 TSGA10Q9BZW7 698 aa13.74□□□□□ -0.21
ZNF548-210ENST00000600442 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.74□□□□□ -0.21
ZNF548-210ENST00000600442 C2CD2Q9Y426 696 aa13.74□□□□□ -0.21
ZNF548-210ENST00000600442 NCOR1O75376 2440 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms