RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 L1RE1Q9UN81 338 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 WDR81Q562E7 1941 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 TMCO5BA8MYB1 307 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 H3BRB1 525 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 KCNK3O14649 394 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 MAP2K7O14733 419 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 CYP1A2P05177 515 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 PNMA6AP0CW24 399 aaPredicted RBP11.15□□□□□ -0.62
VPS25-203ENST00000589520 MCF2P10911 925 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 CHRNB2P17787 502 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 FMO1Q01740 532 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 TDRD10Q5VZ19 366 aaKnown RBP11.15□□□□□ -0.62
VPS25-203ENST00000589520 CCNI2Q6ZMN8 369 aaPredicted RBP11.15□□□□□ -0.62
VPS25-203ENST00000589520 NOP9Q86U38 636 aaKnown RBP11.15□□□□□ -0.62
VPS25-203ENST00000589520 ZNF410Q86VK4 478 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 NT5DC4Q86YG4 428 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 GPIHBP1Q8IV16 184 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 CD302Q8IX05 232 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 METTL13Q8N6R0 699 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 UBL4BQ8N7F7 174 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 LINC01465Q8N7H1 131 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 USP38Q8NB14 1042 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 COPS5Q92905 334 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 ZBTB45Q96K62 511 aaPredicted RBP11.15□□□□□ -0.62
VPS25-203ENST00000589520 PKNOX2Q96KN3 472 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 PNKPQ96T60 521 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.15□□□□□ -0.621e-6■□□□□ 10.5
VPS25-203ENST00000589520 HAPLN2Q9GZV7 340 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 WNT8AQ9H1J5 351 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 CARD9Q9H257 536 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 ASB7Q9H672 318 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 TUT1Q9H6E5 874 aaKnown RBP11.15□□□□□ -0.62
VPS25-203ENST00000589520 AVENQ9NQS1 362 aaPredicted RBP11.15□□□□□ -0.62
VPS25-203ENST00000589520 TOPORSQ9NS56 1045 aaPredicted RBP11.15□□□□□ -0.62
VPS25-203ENST00000589520 ZNF446Q9NWS9 450 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 CTTNBP2NLQ9P2B4 639 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 TMEM59LQ9UK28 342 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 Q9Y3F1 56 aa11.15□□□□□ -0.62
VPS25-203ENST00000589520 LRRC37A2A6NM11 1700 aa11.15□□□□□ -0.63
VPS25-203ENST00000589520 INO80B-WBP1J3KQ70 363 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 PGRMC1O00264 195 aaKnown RBP11.14□□□□□ -0.63
VPS25-203ENST00000589520 ABLIM1O14639 778 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 NCK2O43639 380 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 TBC1D8O95759 1140 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 TNNC2P02585 160 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 CLTAP09496 248 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 KRT5P13647 590 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 SLC1A1P43005 524 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 LBX1P52954 281 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 VSNL1P62760 191 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 MBTD1Q05BQ5 628 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 DRP2Q13474 957 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 TRPC3Q13507 836 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 NCOA4Q13772 614 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 TMEM132AQ24JP5 1023 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 CLEC16AQ2KHT3 1053 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 MORN1Q5T089 497 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 C8orf74Q6P047 294 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 MTHFD1LQ6UB35 978 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 SLC47A2Q86VL8 602 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 IFT20Q8IY31 132 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 LRRC71Q8N4P6 559 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 TTC39CQ8N584 583 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 SMC1BQ8NDV3 1235 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 CCDC26Q8TAB7 109 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 AFG1LQ8WV93 481 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 DDX1Q92499 740 aaKnown RBP11.14□□□□□ -0.63
VPS25-203ENST00000589520 ANKRD36BP1Q96IX9 119 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 C16orf70Q9BSU1 422 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 PLVAPQ9BX97 442 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 INO80BQ9C086 356 aaPredicted RBP11.14□□□□□ -0.63
VPS25-203ENST00000589520 THAP2Q9H0W7 228 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 EPC1Q9H2F5 836 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 RNPEPQ9H4A4 650 aa11.14□□□□□ -0.63
VPS25-203ENST00000589520 RPF1Q9H9Y2 349 aaKnown RBP11.14□□□□□ -0.63
VPS25-203ENST00000589520 CEP104O60308 925 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 FAM189A1O60320 539 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 BUB1BO60566 1050 aaPredicted RBP11.13□□□□□ -0.63
VPS25-203ENST00000589520 VNN1O95497 513 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 ASS1P00966 412 aaKnown RBP11.13□□□□□ -0.63
VPS25-203ENST00000589520 MMP3P08254 477 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 UNGP13051 313 aaPredicted RBP11.13□□□□□ -0.63
VPS25-203ENST00000589520 ACO1P21399 889 aaKnown RBP11.13□□□□□ -0.63
VPS25-203ENST00000589520 ABCB4P21439 1286 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 CXCR5P32302 372 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 ADCYAP1R1P41586 468 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 HUNKP57058 714 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 NOP14P78316 857 aaKnown RBP11.13□□□□□ -0.63
VPS25-203ENST00000589520 MAP2K5Q13163 448 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 NNTQ13423 1086 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 GLIPR1L2Q4G1C9 344 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 LIN9Q5TKA1 542 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 OLFML2BQ68BL8 750 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 CHADLQ6NUI6 762 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 MAATS1Q7Z4T9 603 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 TRIM50Q86XT4 487 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 OR6J1Q8NGC5 347 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 SLC20A1Q8WUM9 679 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 KAT5Q92993 513 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 NLRP4Q96MN2 994 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms