RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-208	ENST00000563911	MAML3	Q96JK9	1138 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CFAP53	Q96M91	514 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	ACAP3	Q96P50	834 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	SYT3	Q9BQG1	590 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	MYL10	Q9BUA6	226 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	SGPP1	Q9BX95	441 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	GALNT8	Q9NY28	637 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CHPF2	Q9P2E5	772 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	TSPYL4	Q9UJ04	414 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PCDHA5	Q9Y5H7	936 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CLSPN	Q9HAW4	1339 aa		7.29	□□□□□ -1.24
HERPUD1-208	ENST00000563911	TEX51	A0A1B0GUA7	166 aa		7.29	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PRPF6	O94906	941 aa	Known RBP	7.29	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PRL	P01236	227 aa		7.29	□□□□□ -1.24
HERPUD1-208	ENST00000563911	GPR3	P46089	330 aa		7.29	□□□□□ -1.24
HERPUD1-208	ENST00000563911	ALDH6A1	Q02252	535 aa	Known RBP	7.29	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PCBP2	Q15366	365 aa	Known RBP eCLIP	7.29	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CLUL1	Q15846	466 aa		7.29	□□□□□ -1.24
HERPUD1-208	ENST00000563911	SKIDA1	Q1XH10	827 aa		7.29	□□□□□ -1.24
HERPUD1-208	ENST00000563911	SLFN12L	Q6IEE8	588 aa		7.29	□□□□□ -1.24
HERPUD1-208	ENST00000563911	B3GNT8	Q7Z7M8	397 aa		7.29	□□□□□ -1.24
HERPUD1-208	ENST00000563911	STK32C	Q86UX6	486 aa		7.29	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CALML6	Q8TD86	181 aa		7.29	□□□□□ -1.24
HERPUD1-208	ENST00000563911	FERMT2	Q96AC1	680 aa		7.29	□□□□□ -1.24
HERPUD1-208	ENST00000563911	TMEM209	Q96SK2	561 aa		7.29	□□□□□ -1.24
HERPUD1-208	ENST00000563911	FOXB1	Q99853	325 aa		7.29	□□□□□ -1.24
HERPUD1-208	ENST00000563911	WASF3	Q9UPY6	502 aa		7.29	□□□□□ -1.24
HERPUD1-208	ENST00000563911	ELL2	O00472	640 aa	Predicted RBP	7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	AKAP10	O43572	662 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	H2AFY	O75367	372 aa	Known RBP	7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	SNUPN	O95149	360 aa	Known RBP	7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	MPIG6B	O95866	241 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	TAL1	P17542	331 aa	Predicted RBP	7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	GLRB	P48167	497 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	RGS3	P49796	1198 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	ADCY2	Q08462	1091 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CRHR2	Q13324	411 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PPP2R5A	Q15172	486 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	UGT8	Q16880	541 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	HSP90AB3P	Q58FF7	597 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CT83	Q5H943	113 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CCDC62	Q6P9F0	684 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	LRSAM1	Q6UWE0	723 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PLBD2	Q8NHP8	589 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	ZNF333	Q96JL9	665 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	EYA3	Q99504	573 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	AMN	Q9BXJ7	453 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PRO3102	Q9H379	93 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PCDH18	Q9HCL0	1135 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	DLL4	Q9NR61	685 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	ZIM2	Q9NZV7	527 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	ARHGAP20	Q9P2F6	1191 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	MRFAP1	Q9Y605	127 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PSME4	Q14997	1843 aa		7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	RBBP6	Q7Z6E9	1792 aa	Known RBP	7.28	□□□□□ -1.24
HERPUD1-208	ENST00000563911	LAMA3	Q16787	3333 aa		7.27	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PRSS38	A1L453	326 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	SNAP23	O00161	211 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	CHL1	O00533	1208 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	ENPP1	P22413	925 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	THBS2	P35442	1172 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	EPHB3	P54753	998 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	MANF	P55145	182 aa	Known RBP	7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	RIPK4	P57078	832 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	FOXO4	P98177	505 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	MYBPC3	Q14896	1274 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	NFE2	Q16621	373 aa	Predicted RBP	7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	FSCN1	Q16658	493 aa	Known RBP	7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	PHF19	Q5T6S3	580 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	IGDCC3	Q8IVU1	814 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	CERS5	Q8N5B7	392 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	DTX3	Q8N9I9	347 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	KCNN1	Q92952	543 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	EAF2	Q96CJ1	260 aa	Predicted RBP	7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	SLC13A1	Q9BZW2	595 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	ARHGAP39	Q9C0H5	1083 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	DNAJC28	Q9NX36	388 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	EDAR	Q9UNE0	448 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	LUC7L2	Q9Y383	392 aa	Known RBP	7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	PPP2R3B	Q9Y5P8	575 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	KIAA0100	Q14667	2235 aa	Known RBP	7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	ZSWIM8	A7E2V4	1837 aa		7.27	□□□□□ -1.25
HERPUD1-208	ENST00000563911	E2F8	A0AVK6	867 aa		7.26	□□□□□ -1.25
HERPUD1-208	ENST00000563911	N4BP3	O15049	544 aa		7.26	□□□□□ -1.25
HERPUD1-208	ENST00000563911	XPOT	O43592	962 aa	Known RBP	7.26	□□□□□ -1.25
HERPUD1-208	ENST00000563911	SEMA7A	O75326	666 aa		7.26	□□□□□ -1.25
HERPUD1-208	ENST00000563911	RBP3	P10745	1247 aa		7.26	□□□□□ -1.25
HERPUD1-208	ENST00000563911	CTGF	P29279	349 aa		7.26	□□□□□ -1.25
HERPUD1-208	ENST00000563911	SREBF2	Q12772	1141 aa		7.26	□□□□□ -1.25
HERPUD1-208	ENST00000563911	PIN1	Q13526	163 aa	Predicted RBP	7.26	□□□□□ -1.25
HERPUD1-208	ENST00000563911	MOGS	Q13724	837 aa		7.26	□□□□□ -1.25
HERPUD1-208	ENST00000563911	NOLC1	Q14978	699 aa	Known RBP eCLIP	7.26	□□□□□ -1.25
HERPUD1-208	ENST00000563911	ACAP2	Q15057	778 aa		7.26	□□□□□ -1.25
HERPUD1-208	ENST00000563911	ZBTB41	Q5SVQ8	909 aa		7.26	□□□□□ -1.25
HERPUD1-208	ENST00000563911	KIAA1841	Q6NSI8	718 aa		7.26	□□□□□ -1.25
HERPUD1-208	ENST00000563911	UNQ6494/PRO21346	Q6UXR6	183 aa		7.26	□□□□□ -1.25
HERPUD1-208	ENST00000563911	FBXO15	Q8NCQ5	510 aa	Predicted RBP	7.26	□□□□□ -1.25
HERPUD1-208	ENST00000563911	ZSWIM3	Q96MP5	696 aa		7.26	□□□□□ -1.25
HERPUD1-208	ENST00000563911	CLIC6	Q96NY7	704 aa		7.26	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 295.1 ms