RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 FAM228AQ86W67 206 aa11.75□□□□□ -0.53
PABPN1-203ENST00000553960 ZNF677Q86XU0 584 aa11.75□□□□□ -0.53
PABPN1-203ENST00000553960 UBR7Q8N806 425 aa11.75□□□□□ -0.53
PABPN1-203ENST00000553960 RDH13Q8NBN7 331 aa11.75□□□□□ -0.53
PABPN1-203ENST00000553960 TAS1R2Q8TE23 839 aa11.75□□□□□ -0.53
PABPN1-203ENST00000553960 TMEM40Q8WWA1 233 aa11.75□□□□□ -0.53
PABPN1-203ENST00000553960 ZNF333Q96JL9 665 aa11.75□□□□□ -0.53
PABPN1-203ENST00000553960 CALR3Q96L12 384 aaKnown RBP11.75□□□□□ -0.53
PABPN1-203ENST00000553960 NT5C1BQ96P26 610 aa11.75□□□□□ -0.53
PABPN1-203ENST00000553960 CRACR2AQ9BSW2 395 aa11.75□□□□□ -0.53
PABPN1-203ENST00000553960 CCDC94Q9BW85 323 aaPredicted RBP11.75□□□□□ -0.53
PABPN1-203ENST00000553960 XYLT2Q9H1B5 865 aa11.75□□□□□ -0.53
PABPN1-203ENST00000553960 CDHR5Q9HBB8 845 aa11.75□□□□□ -0.53
PABPN1-203ENST00000553960 ERVK-5Q9HDB9 667 aa11.75□□□□□ -0.53
PABPN1-203ENST00000553960 TOPORSQ9NS56 1045 aaPredicted RBP11.75□□□□□ -0.53
PABPN1-203ENST00000553960 ARHGAP20Q9P2F6 1191 aa11.75□□□□□ -0.53
PABPN1-203ENST00000553960 ANKFY1Q9P2R3 1169 aa11.75□□□□□ -0.53
PABPN1-203ENST00000553960 DNAJC12Q9UKB3 198 aa11.75□□□□□ -0.53
PABPN1-203ENST00000553960 ITGA11Q9UKX5 1188 aa11.75□□□□□ -0.53
PABPN1-203ENST00000553960 MEFVO15553 781 aaPredicted RBP11.74□□□□□ -0.53
PABPN1-203ENST00000553960 GZMAP12544 262 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 TNNI1P19237 187 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 BPIFB4P59827 614 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 FAM189BP81408 668 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 ZNF200P98182 395 aaPredicted RBP11.74□□□□□ -0.53
PABPN1-203ENST00000553960 SLC18A3Q16572 532 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 ZBTB41Q5SVQ8 909 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 IQCEQ6IPM2 695 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 PPP1R2P3Q6NXS1 205 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 RAD9BQ6WBX8 426 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 LIMS2Q7Z4I7 341 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 REXO1L1PQ8IX06 675 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 LRRC52Q8N7C0 313 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 SLC30A5Q8TAD4 765 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 SEMA4DQ92854 862 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 ZBTB10Q96DT7 871 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 SNX27Q96L92 541 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 PCMTD1Q96MG8 357 aaPredicted RBP11.74□□□□□ -0.53
PABPN1-203ENST00000553960 SPAG5Q96R06 1193 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 OSMRQ99650 979 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 FAM49AQ9H0Q0 323 aaPredicted RBP11.74□□□□□ -0.53
PABPN1-203ENST00000553960 HAUS4Q9H6D7 363 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 NHEJ1Q9H9Q4 299 aaPredicted RBP11.74□□□□□ -0.53
PABPN1-203ENST00000553960 LUC7LQ9NQ29 371 aaKnown RBP11.74□□□□□ -0.53
PABPN1-203ENST00000553960 PPP2R2CQ9Y2T4 447 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 FHOD1Q9Y613 1164 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 CDY2AQ9Y6F7 541 aa11.74□□□□□ -0.53
PABPN1-203ENST00000553960 ANO9A1A5B4 782 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 XPOTO43592 962 aaKnown RBP11.73□□□□□ -0.53
PABPN1-203ENST00000553960 SGPL1O95470 568 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 HLA-DRAP01903 254 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 HSPA8P11142 646 aaKnown RBP11.73□□□□□ -0.53
PABPN1-203ENST00000553960 CCL5P13501 91 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 TNFSF9P41273 254 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 MNX1P50219 401 aaPredicted RBP11.73□□□□□ -0.53
PABPN1-203ENST00000553960 ZNF132P52740 706 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 WNT7BP56706 349 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 PTPRJQ12913 1337 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 DRAP1Q14919 205 aaPredicted RBP11.73□□□□□ -0.53
PABPN1-203ENST00000553960 TRIP11Q15643 1979 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 WDR44Q5JSH3 913 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 FAM126BQ8IXS8 530 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 HACE1Q8IYU2 909 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 OLIG1Q8TAK6 271 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 SPATA18Q8TC71 538 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 CPLX3Q8WVH0 158 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 CCDC127Q96BQ5 260 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 ANKRD36BP1Q96IX9 119 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 KREMEN1Q96MU8 473 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 ZNF830Q96NB3 372 aaPredicted RBP11.73□□□□□ -0.53
PABPN1-203ENST00000553960 SCLT1Q96NL6 688 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 CHP1Q99653 195 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 FTHL17Q9BXU8 183 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 BCO2Q9BYV7 579 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 IMPG2Q9BZV3 1241 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 UNC93B1Q9H1C4 597 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 CYP3A43Q9HB55 503 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 UBN1Q9NPG3 1134 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 STARD7Q9NQZ5 370 aa11.73□□□□□ -0.53
PABPN1-203ENST00000553960 NOC2LQ9Y3T9 749 aaKnown RBP11.73□□□□□ -0.53
PABPN1-203ENST00000553960 A0A0U1RQF3 1178 aa11.72□□□□□ -0.53
PABPN1-203ENST00000553960 LACTBL1A8MY62 500 aa11.72□□□□□ -0.53
PABPN1-203ENST00000553960 EVI5O60447 810 aa11.72□□□□□ -0.53
PABPN1-203ENST00000553960 RPS6KA5O75582 802 aa11.72□□□□□ -0.53
PABPN1-203ENST00000553960 EOMESO95936 686 aa11.72□□□□□ -0.53
PABPN1-203ENST00000553960 TNNC2P02585 160 aa11.72□□□□□ -0.53
PABPN1-203ENST00000553960 DLATP10515 647 aaKnown RBP11.72□□□□□ -0.53
PABPN1-203ENST00000553960 ACTN1P12814 892 aa11.72□□□□□ -0.53
PABPN1-203ENST00000553960 YWHAEP62258 255 aaKnown RBP11.72□□□□□ -0.53
PABPN1-203ENST00000553960 BFSP2Q13515 415 aa11.72□□□□□ -0.53
PABPN1-203ENST00000553960 NCOA4Q13772 614 aa11.72□□□□□ -0.53
PABPN1-203ENST00000553960 VPS36Q86VN1 386 aa11.72□□□□□ -0.53
PABPN1-203ENST00000553960 EFCAB13Q8IY85 973 aa11.72□□□□□ -0.53
PABPN1-203ENST00000553960 OR5B17Q8NGF7 314 aa11.72□□□□□ -0.53
PABPN1-203ENST00000553960 WNT8BQ93098 351 aa11.72□□□□□ -0.53
PABPN1-203ENST00000553960 CCDC42Q96M95 316 aa11.72□□□□□ -0.53
PABPN1-203ENST00000553960 POP1Q99575 1024 aaKnown RBP11.72□□□□□ -0.53
PABPN1-203ENST00000553960 C1orf112Q9NSG2 853 aa11.72□□□□□ -0.53
PABPN1-203ENST00000553960 RNF216Q9NWF9 866 aaPredicted RBP11.72□□□□□ -0.53
PABPN1-203ENST00000553960 ST3GAL5Q9UNP4 418 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms