RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 SIP14410 1827 aa12.33□□□□□ -0.43
C11orf54-214ENST00000540113 TNNI1P19237 187 aa12.33□□□□□ -0.43
C11orf54-214ENST00000540113 ATP4AP20648 1035 aa12.33□□□□□ -0.43
C11orf54-214ENST00000540113 NLRP11P59045 1033 aaKnown RBP12.33□□□□□ -0.43
C11orf54-214ENST00000540113 CNTN2Q02246 1040 aa12.33□□□□□ -0.43
C11orf54-214ENST00000540113 DHX34Q14147 1143 aaKnown RBP12.33□□□□□ -0.43
C11orf54-214ENST00000540113 SLC29A2Q14542 456 aa12.33□□□□□ -0.43
C11orf54-214ENST00000540113 SIX1Q15475 284 aaPredicted RBP12.33□□□□□ -0.43
C11orf54-214ENST00000540113 TRIP13Q15645 432 aaPredicted RBP12.33□□□□□ -0.43
C11orf54-214ENST00000540113 QPCTQ16769 361 aa12.33□□□□□ -0.43
C11orf54-214ENST00000540113 RUFY4Q6ZNE9 571 aa12.33□□□□□ -0.43
C11orf54-214ENST00000540113 SLC13A5Q86YT5 568 aaPredicted RBP12.33□□□□□ -0.43
C11orf54-214ENST00000540113 RPS6KC1Q96S38 1066 aa12.33□□□□□ -0.43
C11orf54-214ENST00000540113 WNT8AQ9H1J5 351 aa12.33□□□□□ -0.43
C11orf54-214ENST00000540113 CYP26B1Q9NR63 512 aa12.33□□□□□ -0.43
C11orf54-214ENST00000540113 DNAJC17Q9NVM6 304 aaKnown RBP12.33□□□□□ -0.43
C11orf54-214ENST00000540113 SLC12A6Q9UHW9 1150 aa12.33□□□□□ -0.43
C11orf54-214ENST00000540113 ANAPC7Q9UJX3 599 aa12.33□□□□□ -0.43
C11orf54-214ENST00000540113 DICER1Q9UPY3 1922 aaKnown RBP12.33□□□□□ -0.43
C11orf54-214ENST00000540113 COQ4Q9Y3A0 265 aa12.33□□□□□ -0.43
C11orf54-214ENST00000540113 SNCAIPQ9Y6H5 919 aa12.33□□□□□ -0.43
C11orf54-214ENST00000540113 FAM187AA6NFU0 413 aa12.33□□□□□ -0.44
C11orf54-214ENST00000540113 USP2O75604 605 aaPredicted RBP12.33□□□□□ -0.44
C11orf54-214ENST00000540113 DGAT1O75907 488 aa12.33□□□□□ -0.44
C11orf54-214ENST00000540113 COILP38432 576 aaPredicted RBP12.33□□□□□ -0.44
C11orf54-214ENST00000540113 PPP2R2AP63151 447 aa12.33□□□□□ -0.44
C11orf54-214ENST00000540113 TREML2Q5T2D2 321 aa12.33□□□□□ -0.44
C11orf54-214ENST00000540113 EMC10Q5UCC4 262 aa12.33□□□□□ -0.44
C11orf54-214ENST00000540113 ACAD10Q6JQN1 1059 aa12.33□□□□□ -0.44
C11orf54-214ENST00000540113 C17orf75Q9HAS0 396 aa12.33□□□□□ -0.44
C11orf54-214ENST00000540113 GTF3C4Q9UKN8 822 aa12.33□□□□□ -0.44
C11orf54-214ENST00000540113 PCDHA3Q9Y5H8 950 aa12.33□□□□□ -0.44
C11orf54-214ENST00000540113 EDN1P05305 212 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 SUPT20HL2P0C7V6 817 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 RRM1P23921 792 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 CHRNA3P32297 505 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 LIG4P49917 911 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 RTP1P59025 263 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 PDE4CQ08493 712 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 BIRC3Q13489 604 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 CLEC16AQ2KHT3 1053 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 SUPT20HL1Q3ZLR7 823 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 SH3D19Q5HYK7 790 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 AZI2Q9H6S1 392 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 ATP6V0A4Q9HBG4 840 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 ARHGAP28Q9P2N2 729 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 RASAL2Q9UJF2 1139 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 LRRC37A2A6NM11 1700 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 MROH7Q68CQ1 1323 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 MYPNQ86TC9 1320 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 MAPK4P31152 587 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 GJC1P36383 396 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 IFI35P80217 286 aaPredicted RBP12.32□□□□□ -0.44
C11orf54-214ENST00000540113 VGLL4Q14135 290 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 TDRD10Q5VZ19 366 aaKnown RBP12.32□□□□□ -0.44
C11orf54-214ENST00000540113 SEPT14Q6ZU15 432 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 TADA2BQ86TJ2 420 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 GPC2Q8N158 579 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 C1orf131Q8NDD1 294 aaKnown RBP12.32□□□□□ -0.44
C11orf54-214ENST00000540113 MCPH1Q8NEM0 835 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 TMC2Q8TDI7 906 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 ASAP3Q8TDY4 903 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 EPS8L3Q8TE67 593 aaKnown RBP12.32□□□□□ -0.44
C11orf54-214ENST00000540113 RAPGEF5Q92565 580 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 VTI1AQ96AJ9 217 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 CYFIP2Q96F07 1278 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 CDHR1Q96JP9 859 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 TSPYL1Q9H0U9 437 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 CHST7Q9NS84 486 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 ANKFY1Q9P2R3 1169 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 PPP2R3BQ9Y5P8 575 aa12.32□□□□□ -0.44
C11orf54-214ENST00000540113 UMODL1Q5DID0 1318 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 LRRIQ4A6NIV6 560 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 FOXO6A8MYZ6 492 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 STAM2O75886 525 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 MTA2O94776 668 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 ERLIN2O94905 339 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 HLA-DRAP01903 254 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 SCP2P22307 547 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 NF2P35240 595 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 VPS41P49754 854 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 POLGP54098 1239 aaPredicted RBP12.31□□□□□ -0.44
C11orf54-214ENST00000540113 RWDD2BP57060 319 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 EMC2Q15006 297 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 TCEAL1Q15170 157 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 GNPTABQ3T906 1256 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 CCDC38Q502W7 563 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 RNF187Q5TA31 235 aaPredicted RBP12.31□□□□□ -0.44
C11orf54-214ENST00000540113 AGBL2Q5U5Z8 902 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 EFCAB13Q8IY85 973 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 PSPC1Q8WXF1 523 aaKnown RBP12.31□□□□□ -0.44
C11orf54-214ENST00000540113 IFT74Q96LB3 600 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 PWWP2AQ96N64 755 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 HEMGNQ9BXL5 484 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 C1orf112Q9NSG2 853 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 HOXC10Q9NYD6 342 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 BTBD7Q9P203 1132 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 PCYOX1Q9UHG3 505 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 TTLL13PA6NNM8 815 aa12.31□□□□□ -0.44
C11orf54-214ENST00000540113 VGLL3A8MV65 326 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms