RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 ARHGAP28Q9P2N2 729 aa12.9□□□□□ -0.34
CTNNA1-237ENST00000523275 WNT16Q9UBV4 365 aa12.9□□□□□ -0.34
CTNNA1-237ENST00000523275 ZFP37Q9Y6Q3 630 aaPredicted RBP12.9□□□□□ -0.34
CTNNA1-237ENST00000523275 PLXNA3P51805 1871 aa12.9□□□□□ -0.34
CTNNA1-237ENST00000523275 ZFHX2Q9C0A1 2572 aaPredicted RBP12.9□□□□□ -0.34
CTNNA1-237ENST00000523275 C2orf16Q68DN1 1984 aa12.9□□□□□ -0.34
CTNNA1-237ENST00000523275 ANHXE9PGG2 379 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 SLC16A4O15374 487 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 C8AP07357 584 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 AOC1P19801 751 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 GJB2P29033 226 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 HOXA9P31269 272 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 SMTNP53814 917 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 STRN3Q13033 797 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 UVSSAQ2YD98 709 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 HYIQ5T013 277 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 CD300LGQ6UXG3 332 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 ANKS3Q6ZW76 656 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 GET4Q7L5D6 327 aaPredicted RBP12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 GRASPQ7Z6J2 395 aaPredicted RBP12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 CEP120Q8N960 986 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 SYT2Q8N9I0 419 aaPredicted RBP12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 SPIRE2Q8WWL2 714 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 ACAP3Q96P50 834 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 PNMA5Q96PV4 448 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 GOLGA2P5Q9HBQ8 144 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 MTRRQ9UBK8 725 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 BACE2Q9Y5Z0 518 aa12.89□□□□□ -0.35
CTNNA1-237ENST00000523275 VWA3AA6NCI4 1184 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 I3L4J1 428 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 STK25O00506 426 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 ABLIM1O14639 778 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 CCL16O15467 120 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 PI15O43692 258 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 XYLBO75191 536 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 CFHP08603 1231 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 SRFP11831 508 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 PLS3P13797 630 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 KCNE1P15382 129 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 PROZP22891 400 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 TKTP29401 623 aaKnown RBP12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 SOX4Q06945 474 aaPredicted RBP12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 RAD51AP2Q09MP3 1159 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 HTR4Q13639 388 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 AXDND1Q5T1B0 1012 aaPredicted RBP12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 ARL6IP4Q66PJ3 421 aaKnown RBP12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 CWF19L1Q69YN2 538 aaKnown RBP12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 MPZL3Q6UWV2 235 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 RTL10Q7L3V2 364 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 SLC7A14Q8TBB6 771 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 CDK5RAP3Q96JB5 506 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 ZMAT2Q96NC0 199 aaKnown RBP12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 PLIN2Q99541 437 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 RTP3Q9BQQ7 232 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 UPF2Q9HAU5 1272 aaKnown RBP12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 KCND2Q9NZV8 630 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 CDH7Q9ULB5 785 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 POLIQ9UNA4 740 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 CDY1Q9Y6F8 540 aa12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 MTCL1Q9Y4B5 1905 aaKnown RBP12.88□□□□□ -0.35
CTNNA1-237ENST00000523275 GFRA3O60609 400 aa12.87□□□□□ -0.35
CTNNA1-237ENST00000523275 TOM1L1O75674 476 aa12.87□□□□□ -0.35
CTNNA1-237ENST00000523275 CD2BP2O95400 341 aaKnown RBP12.87□□□□□ -0.35
CTNNA1-237ENST00000523275 POU2F2P09086 479 aa12.87□□□□□ -0.35
CTNNA1-237ENST00000523275 PLA2G4BP0C869 781 aa12.87□□□□□ -0.35
CTNNA1-237ENST00000523275 RPL9P32969 192 aaKnown RBP12.87□□□□□ -0.35
CTNNA1-237ENST00000523275 BRCC3P46736 316 aa12.87□□□□□ -0.35
CTNNA1-237ENST00000523275 MCM2P49736 904 aa12.87□□□□□ -0.35
CTNNA1-237ENST00000523275 NTHL1P78549 312 aa12.87□□□□□ -0.35
CTNNA1-237ENST00000523275 RSPO2Q6UXX9 243 aaPredicted RBP12.87□□□□□ -0.35
CTNNA1-237ENST00000523275 C3orf58Q8NDZ4 430 aa12.87□□□□□ -0.35
CTNNA1-237ENST00000523275 TMEM161BQ8NDZ6 487 aa12.87□□□□□ -0.35
CTNNA1-237ENST00000523275 ZBTB45Q96K62 511 aaPredicted RBP12.87□□□□□ -0.35
CTNNA1-237ENST00000523275 SNX27Q96L92 541 aa12.87□□□□□ -0.35
CTNNA1-237ENST00000523275 SMC3Q9UQE7 1217 aa12.87□□□□□ -0.35
CTNNA1-237ENST00000523275 KRBA1A5PL33 1030 aa12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 PROB1E7EW31 1015 aa12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 PODXLO00592 558 aa12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 SLC26A4O43511 780 aa12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 MAPTP10636 758 aaKnown RBP12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 HARSP12081 509 aaKnown RBP12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 SLC12A3P55017 1021 aa12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 LARP1BQ659C4 914 aaKnown RBP12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 ZPBP2Q6X784 338 aa12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 CCDC105Q8IYK2 499 aa12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 DTWD2Q8NBA8 298 aa12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 ST13P5Q8NFI4 369 aaPredicted RBP12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 ZNF461Q8TAF7 563 aa12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 GPR152Q8TDT2 470 aa12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 FGF13Q92913 245 aa12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 C18orf25Q96B23 403 aaPredicted RBP12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 AK8Q96MA6 479 aa12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 SLC2A4RGQ9NR83 387 aa12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 CNTN3Q9P232 1028 aa12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 ANKFY1Q9P2R3 1169 aa12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 CA14Q9ULX7 337 aa12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 NUB1Q9Y5A7 615 aa12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 NUMBLQ9Y6R0 609 aa12.86□□□□□ -0.35
CTNNA1-237ENST00000523275 NPHP3-ACAD11A0A0J9YXS1 232 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms