RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 MTRRQ9UBK8 725 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 ZMYM2Q9UBW7 1377 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 LNP1A1A4G5 178 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 ARHGEF37A1IGU5 675 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 SLC38A8A6NNN8 435 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 PSMD10O75832 226 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 MICAL2O94851 1124 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 CAPNS1P04632 268 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 TUSC3Q13454 348 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 PLK5Q496M5 336 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 C19orf48Q6RUI8 117 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 B3GNT9Q6UX72 402 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 SGMS1Q86VZ5 419 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 CHD1LQ86WJ1 897 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 PROSER1Q86XN7 944 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 SMC5Q8IY18 1101 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 HACE1Q8IYU2 909 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 REXO1Q8N1G1 1221 aaKnown RBP15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 RNF149Q8NC42 400 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 CORO1BQ9BR76 489 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 C8orf33Q9H7E9 229 aaPredicted RBP15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 TRPV4Q9HBA0 871 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 KLK13Q9UKR3 277 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 CDY1Q9Y6F8 540 aa15.45■□□□□ 0.06
NKX3-1-202ENST00000523261 ESYT2A0FGR8 921 aa15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 MYBPHLA2RUH7 354 aa15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 CASTOR2A6NHX0 329 aa15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 ZNF197O14709 1029 aa15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 NPEPPSP55786 919 aa15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 SPIRE1Q08AE8 756 aa15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 ELAVL2Q12926 359 aaKnown RBP15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 CCINQ13939 588 aa15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 PCBP1Q15365 356 aaKnown RBP eCLIP15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 ZNF579Q8NAF0 562 aaKnown RBP15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 CSGALNACT1Q8TDX6 532 aa15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 SLC7A3Q8WY07 619 aa15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 BBC3Q96PG8 261 aaPredicted RBP15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 LRRC2Q9BYS8 371 aa15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 TRIM6Q9C030 488 aaPredicted RBP15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 ZMYND12Q9H0C1 365 aa15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 DHX33Q9H6R0 707 aaKnown RBP15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 RBM28Q9NW13 759 aaKnown RBP15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 ANKFY1Q9P2R3 1169 aa15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 CACNA1EQ15878 2313 aa15.44■□□□□ 0.06
NKX3-1-202ENST00000523261 ASCC3Q8N3C0 2202 aaKnown RBP15.43■□□□□ 0.06
NKX3-1-202ENST00000523261 SPECC1L-ADORA2AF8WAN1 911 aa15.43■□□□□ 0.06
NKX3-1-202ENST00000523261 LRG1P02750 347 aa15.43■□□□□ 0.06
NKX3-1-202ENST00000523261 FGFR3P22607 806 aa15.43■□□□□ 0.06
NKX3-1-202ENST00000523261 CTHP32929 405 aa15.43■□□□□ 0.06
NKX3-1-202ENST00000523261 KPNA1P52294 538 aaPredicted RBP15.43■□□□□ 0.06
NKX3-1-202ENST00000523261 PKN3Q6P5Z2 889 aa15.43■□□□□ 0.06
NKX3-1-202ENST00000523261 APOA5Q6Q788 366 aa15.43■□□□□ 0.06
NKX3-1-202ENST00000523261 SYNPOQ8N3V7 929 aa15.43■□□□□ 0.06
NKX3-1-202ENST00000523261 CCDC136Q96JN2 1154 aa15.43■□□□□ 0.06
NKX3-1-202ENST00000523261 DUSP15Q9H1R2 295 aaPredicted RBP15.43■□□□□ 0.06
NKX3-1-202ENST00000523261 BCLAF3A2AJT9 711 aaKnown RBP15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 PCNX2A6NKB5 2137 aa15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 HEPACAM2A8MVW5 462 aa15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 CHADO15335 359 aa15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 MOSPD3O75425 235 aa15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 CAVIN2O95810 425 aa15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 ARF4P18085 180 aaPredicted RBP15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 PTENP60484 403 aa15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 AMHR2Q16671 573 aa15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 COL28A1Q2UY09 1125 aa15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 PDZD4Q76G19 769 aaPredicted RBP15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 FERMT3Q86UX7 667 aa15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 RALGPS2Q86X27 583 aaPredicted RBP15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 DEFB124Q8NES8 71 aa15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 ZSCAN18Q8TBC5 510 aaPredicted RBP15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 RUFY2Q8WXA3 655 aa15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 RSPRY1Q96DX4 576 aa15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 TMEM9BQ9NQ34 198 aa15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 PARP2Q9UGN5 583 aa15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 RBM8AQ9Y5S9 174 aaKnown RBP15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 BACE2Q9Y5Z0 518 aa15.42■□□□□ 0.06
NKX3-1-202ENST00000523261 CDX4O14627 284 aaPredicted RBP15.41■□□□□ 0.06
NKX3-1-202ENST00000523261 ASAP2O43150 1006 aa15.41■□□□□ 0.06
NKX3-1-202ENST00000523261 PSMC5P62195 406 aa15.41■□□□□ 0.06
NKX3-1-202ENST00000523261 NUCB1Q02818 461 aa15.41■□□□□ 0.06
NKX3-1-202ENST00000523261 CREB5Q02930 508 aa15.41■□□□□ 0.06
NKX3-1-202ENST00000523261 NCBP1Q09161 790 aaKnown RBP15.41■□□□□ 0.06
NKX3-1-202ENST00000523261 FCHO2Q0JRZ9 810 aa15.41■□□□□ 0.06
NKX3-1-202ENST00000523261 PON2Q15165 354 aa15.41■□□□□ 0.06
NKX3-1-202ENST00000523261 NAB2Q15742 525 aa15.41■□□□□ 0.06
NKX3-1-202ENST00000523261 RTN1Q16799 776 aa15.41■□□□□ 0.06
NKX3-1-202ENST00000523261 PFKFB3Q16875 520 aaPredicted RBP15.41■□□□□ 0.06
NKX3-1-202ENST00000523261 SYNE3Q6ZMZ3 975 aa15.41■□□□□ 0.06
NKX3-1-202ENST00000523261 CDR2LQ86X02 465 aaPredicted RBP15.41■□□□□ 0.06
NKX3-1-202ENST00000523261 EXOC8Q8IYI6 725 aa15.41■□□□□ 0.06
NKX3-1-202ENST00000523261 ADAM32Q8TC27 787 aa15.41■□□□□ 0.06
NKX3-1-202ENST00000523261 C6orf50Q9HD87 102 aa15.41■□□□□ 0.06
NKX3-1-202ENST00000523261 BMP2KQ9NSY1 1161 aaPredicted RBP15.41■□□□□ 0.06
NKX3-1-202ENST00000523261 NUP205Q92621 2012 aa15.41■□□□□ 0.06
NKX3-1-202ENST00000523261 INO80B-WBP1J3KQ70 363 aa15.4■□□□□ 0.06
NKX3-1-202ENST00000523261 PTGESO14684 152 aa15.4■□□□□ 0.06
NKX3-1-202ENST00000523261 ABLIM3O94929 683 aa15.4■□□□□ 0.06
NKX3-1-202ENST00000523261 NPTXRO95502 500 aa15.4■□□□□ 0.06
NKX3-1-202ENST00000523261 IGFBP6P24592 240 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms