RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 TMEM140Q9NV12 185 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 KLHL11Q9NVR0 708 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 MOCS1Q9NZB8 636 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 DKK2Q9UBU2 259 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 WDR33Q9C0J8 1336 aaKnown RBP4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 AATKQ6ZMQ8 1374 aa4.63□□□□□ -1.67
HMGB1P29-201ENST00000505659 TCRBV7S2A1N4TA0A589 114 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 FAM171A2A8MVW0 826 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 PROZP22891 400 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 ATP8B2P98198 1209 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 COL10A1Q03692 680 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 TARDBPQ13148 414 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 TP53BP2Q13625 1128 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 PTPAQ15257 358 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 KRTAP15-1Q3LI76 137 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 OTUD7BQ6GQQ9 843 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 RHOT2Q8IXI1 618 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 DRC7Q8IY82 874 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 DCBLD1Q8N8Z6 715 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 GPR150Q8NGU9 434 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 CASKIN2Q8WXE0 1202 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 ASB10Q8WXI3 467 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 SMAD5Q99717 465 aaKnown RBP4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 PRRX2Q99811 253 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 C7orf25Q9BPX7 421 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 SERHL2Q9H4I8 314 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 USP25Q9UHP3 1055 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 SERPINB13Q9UIV8 391 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 PCDHA13Q9Y5I0 950 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 FPGT-TNNI3KV9GXZ4 949 aa4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 MYBBP1AQ9BQG0 1328 aaKnown RBP4.62□□□□□ -1.67
HMGB1P29-201ENST00000505659 GAGE12BA1L429 117 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 GAGE12HA6NDE8 117 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 DIRC3C9JPN6 131 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 SPDEFO95238 335 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 POMCP01189 267 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 DDCP20711 480 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 DDX6P26196 483 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 SLC6A4P31645 630 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 ZEB1P37275 1124 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 OCA2Q04671 838 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 RESTQ13127 1097 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 IL10RAQ13651 578 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 ODF1Q14990 250 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 UBXN2BQ14CS0 331 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 C3orf36Q3SXR2 165 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 Q6YL49 198 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 SEM1Q6ZVN7 128 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 MAPKAPK5Q8IW41 473 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 FUBP3Q96I24 572 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 TEKT5Q96M29 485 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 LIMCH1Q9UPQ0 1083 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 COL4A3BPQ9Y5P4 624 aa4.61□□□□□ -1.67
HMGB1P29-201ENST00000505659 TMEM191CA6NGB0 347 aa4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 KIAA0391O15091 583 aaKnown RBP4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 CFIP05156 583 aa4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 SPATA31D3P0C874 917 aa4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 FGFR4P22455 802 aa4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 EDNRBP24530 442 aa4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 HSD11B2P80365 405 aa4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 KIF23Q02241 960 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 GJC2Q5T442 439 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 HECTD2Q5U5R9 776 aa4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 B3GNTL1Q67FW5 361 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 SPATA31D4Q6ZUB0 917 aa4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 ARHGEF19Q8IW93 802 aa4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 CMTR2Q8IYT2 770 aaKnown RBP4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 KAT5Q92993 513 aa4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 TMX3Q96JJ7 454 aa4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 MANSC1Q9H8J5 431 aa4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 PCDH12Q9NPG4 1184 aa4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 C11orf21Q9P2W6 132 aa4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 ATP11BQ9Y2G3 1177 aa4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 IPPQ9Y573 584 aa4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 TNKSO95271 1327 aa4.6□□□□□ -1.67
HMGB1P29-201ENST00000505659 A0A1B0GTW7 788 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 SHTN1A0MZ66 631 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 CDHR4A6H8M9 788 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 KLHL33A6NCF5 533 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 CCDC154A6NI56 674 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 HTRA2O43464 458 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 B3GALT2O43825 422 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 GCP02774 474 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 SBK3P0C264 359 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 GCSHP23434 173 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 BMPR1AP36894 532 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 WASP42768 502 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 NOMO3P69849 1222 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 COL4A3Q01955 1670 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 GUCY1B3Q02153 619 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 SCAPQ12770 1279 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 PTPN21Q16825 1174 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 NOMO2Q5JPE7 1267 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 CYFIP2Q96F07 1278 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 MARS2Q96GW9 593 aaKnown RBP4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 ASPSCR1Q9BZE9 553 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 GSTO2Q9H4Y5 243 aa4.59□□□□□ -1.67
HMGB1P29-201ENST00000505659 WASHC2CQ9Y4E1 1318 aa4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 OVOL3O00110 214 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms