RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 EVA1CP58658 441 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 AMPD3Q01432 767 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 RESTQ13127 1097 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 MTM1Q13496 603 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 MTMR1Q13613 665 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 FAM50AQ14320 339 aaKnown RBP6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 UBXN2BQ14CS0 331 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 OTUD7BQ6GQQ9 843 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 Q6YL49 198 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 RHOT2Q8IXI1 618 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 TMEM140Q9NV12 185 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 TRHDEQ9UKU6 1024 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 PCDHGA9Q9Y5G4 932 aaKnown RBP6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 PCDHGA8Q9Y5G5 932 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 PCDHGA7Q9Y5G6 932 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 PCDHGA6Q9Y5G7 932 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 PCDHGA3Q9Y5H0 932 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 FPGT-TNNI3KV9GXZ4 949 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 FAM171A2A8MVW0 826 aa6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 B3GALT2O43825 422 aa6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 GPR32O75388 356 aa6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 KATNA1O75449 491 aa6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 POMCP01189 267 aa6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 SPATA31D3P0C874 917 aa6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 CDK11BP21127 795 aaKnown RBP6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 C5AR1P21730 350 aa6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 BMPR1AP36894 532 aa6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 ATP8B2P98198 1209 aa6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 ACAP2Q15057 778 aa6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 SMN1Q16637 294 aaKnown RBP6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 B3GNTL1Q67FW5 361 aaPredicted RBP6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 SPATA31D4Q6ZUB0 917 aa6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 DRC7Q8IY82 874 aa6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 CMTR2Q8IYT2 770 aaKnown RBP6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 CASKIN2Q8WXE0 1202 aa6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 ASB10Q8WXI3 467 aa6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 CYFIP2Q96F07 1278 aa6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 MKS1Q9NXB0 559 aa6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 ATP11BQ9Y2G3 1177 aa6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 AATKQ6ZMQ8 1374 aa6.28□□□□□ -1.4
UBE2D3-218ENST00000505009 MYBBP1AQ9BQG0 1328 aaKnown RBP6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 FZD9O00144 591 aa6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 TEX33O43247 280 aa6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 NDUFS2O75306 463 aa6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 CFIP05156 583 aa6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 MYBL2P10244 700 aa6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 DDCP20711 480 aa6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 GUCY2FP51841 1108 aa6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 GUCY1B3Q02153 619 aa6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 OCA2Q04671 838 aa6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 HECTD2Q5U5R9 776 aa6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 SYDE2Q5VT97 1194 aa6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 SEM1Q6ZVN7 128 aa6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 MAPKAPK5Q8IW41 473 aa6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 RHOT1Q8IXI2 618 aa6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 FUBP3Q96I24 572 aaKnown RBP eCLIP6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 FAXDC2Q96IV6 333 aa6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 C7orf25Q9BPX7 421 aa6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 USP25Q9UHP3 1055 aa6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 PCDHA13Q9Y5I0 950 aa6.27□□□□□ -1.41
UBE2D3-218ENST00000505009 TCRBV7S2A1N4TA0A589 114 aa6.26□□□□□ -1.41
UBE2D3-218ENST00000505009 FGFR4P22455 802 aa6.26□□□□□ -1.41
UBE2D3-218ENST00000505009 ITKQ08881 620 aa6.26□□□□□ -1.41
UBE2D3-218ENST00000505009 TARDBPQ13148 414 aaKnown RBP eCLIP6.26□□□□□ -1.41
UBE2D3-218ENST00000505009 PCBP2Q15366 365 aaKnown RBP eCLIP6.26□□□□□ -1.41
UBE2D3-218ENST00000505009 DCBLD1Q8N8Z6 715 aa6.26□□□□□ -1.41
UBE2D3-218ENST00000505009 PRPF38AQ8NAV1 312 aaKnown RBP6.26□□□□□ -1.41
UBE2D3-218ENST00000505009 MTMR8Q96EF0 704 aa6.26□□□□□ -1.41
UBE2D3-218ENST00000505009 CYP4F11Q9HBI6 524 aa6.26□□□□□ -1.41
UBE2D3-218ENST00000505009 PACSIN3Q9UKS6 424 aa6.26□□□□□ -1.41
UBE2D3-218ENST00000505009 A0A1B0GTW7 788 aa6.25□□□□□ -1.41
UBE2D3-218ENST00000505009 ALG1L2C9J202 215 aa6.25□□□□□ -1.41
UBE2D3-218ENST00000505009 GABRDO14764 452 aa6.25□□□□□ -1.41
UBE2D3-218ENST00000505009 HLA-DOAP06340 250 aa6.25□□□□□ -1.41
UBE2D3-218ENST00000505009 GCSHP23434 173 aa6.25□□□□□ -1.41
UBE2D3-218ENST00000505009 HSD11B2P80365 405 aa6.25□□□□□ -1.41
UBE2D3-218ENST00000505009 SCAPQ12770 1279 aa6.25□□□□□ -1.41
UBE2D3-218ENST00000505009 TMEM132CQ8N3T6 1108 aa6.25□□□□□ -1.41
UBE2D3-218ENST00000505009 LCORLQ8N3X6 602 aa6.25□□□□□ -1.41
UBE2D3-218ENST00000505009 REXO4Q9GZR2 422 aaKnown RBP6.25□□□□□ -1.41
UBE2D3-218ENST00000505009 GSTO2Q9H4Y5 243 aa6.25□□□□□ -1.41
UBE2D3-218ENST00000505009 MANSC1Q9H8J5 431 aa6.25□□□□□ -1.41
UBE2D3-218ENST00000505009 SYBUQ9NX95 663 aa6.25□□□□□ -1.41
UBE2D3-218ENST00000505009 SAP30BPQ9UHR5 308 aaKnown RBP6.25□□□□□ -1.41
UBE2D3-218ENST00000505009 CDHR4A6H8M9 788 aa6.24□□□□□ -1.41
UBE2D3-218ENST00000505009 KIAA0391O15091 583 aaKnown RBP6.24□□□□□ -1.41
UBE2D3-218ENST00000505009 XPOTO43592 962 aaKnown RBP6.24□□□□□ -1.41
UBE2D3-218ENST00000505009 CDKL5O76039 1030 aa6.24□□□□□ -1.41
UBE2D3-218ENST00000505009 BMP5P22003 454 aa6.24□□□□□ -1.41
UBE2D3-218ENST00000505009 EDNRBP24530 442 aa6.24□□□□□ -1.41
UBE2D3-218ENST00000505009 SLC6A4P31645 630 aa6.24□□□□□ -1.41
UBE2D3-218ENST00000505009 WASP42768 502 aa6.24□□□□□ -1.41
UBE2D3-218ENST00000505009 NANOS3P60323 173 aaKnown RBP6.24□□□□□ -1.41
UBE2D3-218ENST00000505009 NOMO3P69849 1222 aa6.24□□□□□ -1.41
UBE2D3-218ENST00000505009 MXRA7P84157 204 aa6.24□□□□□ -1.41
UBE2D3-218ENST00000505009 C3orf36Q3SXR2 165 aa6.24□□□□□ -1.41
UBE2D3-218ENST00000505009 NOMO2Q5JPE7 1267 aa6.24□□□□□ -1.41
UBE2D3-218ENST00000505009 ARMC6Q6NXE6 501 aa6.24□□□□□ -1.41
UBE2D3-218ENST00000505009 ZG16BQ96DA0 208 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms