RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 GOLGA8JA6NMD2 632 aa17.36■□□□□ 0.37
SSBP1-214ENST00000498107 BIN1O00499 593 aa17.36■□□□□ 0.37
SSBP1-214ENST00000498107 NRP1O14786 923 aa17.36■□□□□ 0.37
SSBP1-214ENST00000498107 NR3C1P04150 777 aa17.36■□□□□ 0.37
SSBP1-214ENST00000498107 CYP3A5P20815 502 aa17.36■□□□□ 0.37
SSBP1-214ENST00000498107 RPL9P32969 192 aaKnown RBP17.36■□□□□ 0.37
SSBP1-214ENST00000498107 SLC11A1P49279 550 aa17.36■□□□□ 0.37
SSBP1-214ENST00000498107 EDRF1Q3B7T1 1238 aa17.36■□□□□ 0.37
SSBP1-214ENST00000498107 SMYD4Q8IYR2 804 aaPredicted RBP17.36■□□□□ 0.37
SSBP1-214ENST00000498107 ADSSL1Q8N142 457 aa17.36■□□□□ 0.37
SSBP1-214ENST00000498107 SYAP1Q96A49 352 aaPredicted RBP17.36■□□□□ 0.37
SSBP1-214ENST00000498107 KIF12Q96FN5 646 aa17.36■□□□□ 0.37
SSBP1-214ENST00000498107 IGSF21Q96ID5 467 aa17.36■□□□□ 0.37
SSBP1-214ENST00000498107 MTMR10Q9NXD2 777 aa17.36■□□□□ 0.37
SSBP1-214ENST00000498107 FRMD4BQ9Y2L6 1034 aa17.36■□□□□ 0.37
SSBP1-214ENST00000498107 C2CD2Q9Y426 696 aa17.36■□□□□ 0.37
SSBP1-214ENST00000498107 ITGB1P05556 798 aa17.35■□□□□ 0.37
SSBP1-214ENST00000498107 LRRC63Q05C16 580 aa17.35■□□□□ 0.37
SSBP1-214ENST00000498107 TMEM132DQ14C87 1099 aa17.35■□□□□ 0.37
SSBP1-214ENST00000498107 NAB2Q15742 525 aa17.35■□□□□ 0.37
SSBP1-214ENST00000498107 SNRNP35Q16560 246 aaKnown RBP17.35■□□□□ 0.37
SSBP1-214ENST00000498107 ISM2Q6H9L7 571 aa17.35■□□□□ 0.37
SSBP1-214ENST00000498107 CENPPQ6IPU0 288 aa17.35■□□□□ 0.37
SSBP1-214ENST00000498107 BEST2Q8NFU1 509 aa17.35■□□□□ 0.37
SSBP1-214ENST00000498107 GDPD5Q8WTR4 605 aa17.35■□□□□ 0.37
SSBP1-214ENST00000498107 CACTINQ8WUQ7 758 aaKnown RBP17.35■□□□□ 0.37
SSBP1-214ENST00000498107 ZMAT2Q96NC0 199 aaKnown RBP17.35■□□□□ 0.37
SSBP1-214ENST00000498107 CDX2Q99626 313 aaPredicted RBP17.35■□□□□ 0.37
SSBP1-214ENST00000498107 PRG3Q9Y2Y8 225 aaPredicted RBP17.35■□□□□ 0.37
SSBP1-214ENST00000498107 PDCD11Q14690 1871 aaKnown RBP17.35■□□□□ 0.37
SSBP1-214ENST00000498107 CHD9Q3L8U1 2897 aa17.34■□□□□ 0.37
SSBP1-214ENST00000498107 BICDL2A1A5D9 508 aa17.34■□□□□ 0.37
SSBP1-214ENST00000498107 EPOPA6NHQ4 379 aa17.34■□□□□ 0.37
SSBP1-214ENST00000498107 CASTOR2A6NHX0 329 aa17.34■□□□□ 0.37
SSBP1-214ENST00000498107 NT5C1B-RDH14C9J2C7 533 aa17.34■□□□□ 0.37
SSBP1-214ENST00000498107 POU3F3P20264 500 aaPredicted RBP17.34■□□□□ 0.37
SSBP1-214ENST00000498107 NR2F2P24468 414 aa17.34■□□□□ 0.37
SSBP1-214ENST00000498107 PBX3P40426 434 aa17.34■□□□□ 0.37
SSBP1-214ENST00000498107 CCDC183Q5T5S1 534 aa17.34■□□□□ 0.37
SSBP1-214ENST00000498107 JADE1Q6IE81 842 aa17.34■□□□□ 0.37
SSBP1-214ENST00000498107 PDE12Q6L8Q7 609 aaKnown RBP17.34■□□□□ 0.37
SSBP1-214ENST00000498107 DCLRE1AQ6PJP8 1040 aa17.34■□□□□ 0.37
SSBP1-214ENST00000498107 FOXR2Q6PJQ5 311 aa17.34■□□□□ 0.37
SSBP1-214ENST00000498107 USP37Q86T82 979 aa17.34■□□□□ 0.37
SSBP1-214ENST00000498107 DDX53Q86TM3 631 aaKnown RBP17.34■□□□□ 0.37
SSBP1-214ENST00000498107 SPPL3Q8TCT6 385 aa17.34■□□□□ 0.37
SSBP1-214ENST00000498107 CXCL16Q9H2A7 254 aa17.34■□□□□ 0.37
SSBP1-214ENST00000498107 ALG13Q9NP73 1137 aaKnown RBP17.34■□□□□ 0.37
SSBP1-214ENST00000498107 DMAC2Q9NW81 257 aa17.34■□□□□ 0.37
SSBP1-214ENST00000498107 TMEM189-UBE2V1I3L0A0 370 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 RFXAPO00287 272 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 CETN3O15182 167 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 MAPK13O15264 365 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 MEFVO15553 781 aaPredicted RBP17.33■□□□□ 0.36
SSBP1-214ENST00000498107 B4GALT3O60512 393 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 TADA2AO75478 443 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 CCNE1P24864 410 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 FKBP3Q00688 224 aaKnown RBP17.33■□□□□ 0.36
SSBP1-214ENST00000498107 ELAVL2Q12926 359 aaKnown RBP17.33■□□□□ 0.36
SSBP1-214ENST00000498107 ADAM9Q13443 819 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 ZBTB6Q15916 424 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 ZCWPW2Q504Y3 356 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 SPATA1Q5VX52 437 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 CBWD2Q8IUF1 395 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 MLKLQ8NB16 471 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 POF1BQ8WVV4 589 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 MRPL38Q96DV4 380 aaKnown RBP17.33■□□□□ 0.36
SSBP1-214ENST00000498107 GUCD1Q96NT3 240 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 FNBP1Q96RU3 617 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 TLR9Q9NR96 1032 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 DACH1Q9UI36 760 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 ADAM28Q9UKQ2 775 aa17.33■□□□□ 0.36
SSBP1-214ENST00000498107 SF3B1O75533 1304 aaKnown RBP eCLIP17.32■□□□□ 0.365e-6■■■□□ 17.1
SSBP1-214ENST00000498107 TULP1O00294 542 aaPredicted RBP17.32■□□□□ 0.36
SSBP1-214ENST00000498107 GRM6O15303 877 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 TRAPPC3O43617 180 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 LPXNO60711 386 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 FOSL2P15408 326 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 IGFBP4P22692 258 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 PAX3P23760 479 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 LRPAP1P30533 357 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 SPAG1Q07617 926 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 CYP24A1Q07973 514 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 PSMD6Q15008 389 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 UPP1Q16831 310 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 TIGD5Q53EQ6 642 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 CEP135Q66GS9 1140 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 RDH13Q8NBN7 331 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 ZSWIM2Q8NEG5 633 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 MYLIPQ8WY64 445 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 PPP2R3CQ969Q6 453 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 MFSD14AQ96MC6 490 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 NGRNQ9NPE2 291 aaKnown RBP17.32■□□□□ 0.36
SSBP1-214ENST00000498107 ANK1P16157 1881 aa17.32■□□□□ 0.36
SSBP1-214ENST00000498107 COL4A4P53420 1690 aaPredicted RBP17.32■□□□□ 0.36
SSBP1-214ENST00000498107 PPP1R3GB7ZBB8 358 aa17.31■□□□□ 0.36
SSBP1-214ENST00000498107 PODXLO00592 558 aa17.31■□□□□ 0.36
SSBP1-214ENST00000498107 B3GAT3O94766 335 aa17.31■□□□□ 0.36
SSBP1-214ENST00000498107 NFICP08651 508 aa17.31■□□□□ 0.36
SSBP1-214ENST00000498107 TMEM191BP0C7N4 346 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms