RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 RPS9P46781 194 aaKnown RBP15.7■□□□□ 0.1
VARS-228ENST00000495010 RBM25P49756 843 aaKnown RBP15.7■□□□□ 0.1
VARS-228ENST00000495010 LMNB2Q03252 620 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 TRIM29Q14134 588 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 PPP2R5DQ14738 602 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 PPP2R5AQ15172 486 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 NAB2Q15742 525 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 ZBTB44Q8NCP5 570 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 ERMNQ8TAM6 284 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 CLDN23Q96B33 292 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 EPC1Q9H2F5 836 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 TUFT1Q9NNX1 390 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 HEBP1Q9NRV9 189 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 DAXXQ9UER7 740 aaPredicted RBP15.7■□□□□ 0.1
VARS-228ENST00000495010 RAB23Q9ULC3 237 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 TPCN1Q9ULQ1 816 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 BACE2Q9Y5Z0 518 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 ARHGEF35A5YM69 484 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 TTLL13PA6NNM8 815 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 TMEM189-UBE2V1I3L0A0 370 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 MAN2B1O00754 1011 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 PRRG1O14668 218 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 TBC1D4O60343 1298 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 TKTP29401 623 aaKnown RBP15.69■□□□□ 0.1
VARS-228ENST00000495010 NAMPTP43490 491 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 CLCNKBP51801 687 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 ADCY1Q08828 1119 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 ANKRD1Q15327 319 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 GLRA4Q5JXX5 417 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 TSSK4Q6SA08 328 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 CATSPER3Q86XQ3 398 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 TNFRSF25Q93038 417 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 ELSPBP1Q96BH3 223 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 IFT74Q96LB3 600 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 FAM126AQ9BYI3 521 aaPredicted RBP15.69■□□□□ 0.1
VARS-228ENST00000495010 PLA2G2FQ9BZM2 168 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 CXCL16Q9H2A7 254 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 BRD9Q9H8M2 597 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 USP20Q9Y2K6 914 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 COL4A3Q01955 1670 aa15.69■□□□□ 0.1
VARS-228ENST00000495010 PATJQ8NI35 1801 aa15.68■□□□□ 0.1
VARS-228ENST00000495010 OTOGLQ3ZCN5 2332 aa15.68■□□□□ 0.1
VARS-228ENST00000495010 BTBD18B2RXH4 712 aa15.68■□□□□ 0.1
VARS-228ENST00000495010 ZNF197O14709 1029 aa15.68■□□□□ 0.1
VARS-228ENST00000495010 CTDNEP1O95476 244 aa15.68■□□□□ 0.1
VARS-228ENST00000495010 SPATA31C1P0DKV0 1188 aa15.68■□□□□ 0.1
VARS-228ENST00000495010 ATXN1P54253 815 aaKnown RBP15.68■□□□□ 0.1
VARS-228ENST00000495010 YARSP54577 528 aaKnown RBP15.68■□□□□ 0.1
VARS-228ENST00000495010 NRLP54845 237 aa15.68■□□□□ 0.1
VARS-228ENST00000495010 ARPP19P56211 112 aa15.68■□□□□ 0.1
VARS-228ENST00000495010 ATF7IP2Q5U623 682 aa15.68■□□□□ 0.1
VARS-228ENST00000495010 TANGO2Q6ICL3 276 aa15.68■□□□□ 0.1
VARS-228ENST00000495010 PADI6Q6TGC4 694 aa15.68■□□□□ 0.1
VARS-228ENST00000495010 DIS3L2Q8IYB7 885 aaKnown RBP15.68■□□□□ 0.1
VARS-228ENST00000495010 ZNF461Q8TAF7 563 aa15.68■□□□□ 0.1
VARS-228ENST00000495010 DNASE1L2Q92874 299 aa15.68■□□□□ 0.1
VARS-228ENST00000495010 DDX27Q96GQ7 796 aaKnown RBP15.68■□□□□ 0.1
VARS-228ENST00000495010 CNTNAP3BQ96NU0 1288 aa15.68■□□□□ 0.1
VARS-228ENST00000495010 MTMR9Q96QG7 549 aa15.68■□□□□ 0.1
VARS-228ENST00000495010 CORO1BQ9BR76 489 aa15.68■□□□□ 0.1
VARS-228ENST00000495010 CNTNAP3Q9BZ76 1288 aa15.68■□□□□ 0.1
VARS-228ENST00000495010 ZFP14Q9HCL3 533 aa15.68■□□□□ 0.1
VARS-228ENST00000495010 NDRG2Q9UN36 371 aaKnown RBP15.68■□□□□ 0.1
VARS-228ENST00000495010 I3L4J1 428 aa15.67■□□□□ 0.1
VARS-228ENST00000495010 LILRB5O75023 590 aa15.67■□□□□ 0.1
VARS-228ENST00000495010 MED24O75448 989 aa15.67■□□□□ 0.1
VARS-228ENST00000495010 CEBPBP17676 345 aa15.67■□□□□ 0.1
VARS-228ENST00000495010 CYP11B2P19099 503 aa15.67■□□□□ 0.1
VARS-228ENST00000495010 MCM7P33993 719 aa15.67■□□□□ 0.1
VARS-228ENST00000495010 BRCC3P46736 316 aa15.67■□□□□ 0.1
VARS-228ENST00000495010 EFNA5P52803 228 aa15.67■□□□□ 0.1
VARS-228ENST00000495010 FOSBP53539 338 aa15.67■□□□□ 0.1
VARS-228ENST00000495010 MTAPQ13126 283 aa15.67■□□□□ 0.1
VARS-228ENST00000495010 GRM2Q14416 872 aa15.67■□□□□ 0.1
VARS-228ENST00000495010 UPP1Q16831 310 aa15.67■□□□□ 0.1
VARS-228ENST00000495010 SLC5A9Q2M3M2 681 aa15.67■□□□□ 0.1
VARS-228ENST00000495010 EEF1DP3Q658K8 133 aa15.67■□□□□ 0.1
VARS-228ENST00000495010 ELMOD1Q8N336 334 aa15.67■□□□□ 0.1
VARS-228ENST00000495010 BSNDQ8WZ55 320 aa15.67■□□□□ 0.1
VARS-228ENST00000495010 PPP1R10Q96QC0 940 aaKnown RBP15.67■□□□□ 0.1
VARS-228ENST00000495010 RTKNQ9BST9 563 aa15.67■□□□□ 0.1
VARS-228ENST00000495010 POLR3CQ9BUI4 534 aaPredicted RBP15.67■□□□□ 0.1
VARS-228ENST00000495010 TRMT61BQ9BVS5 477 aaKnown RBP15.67■□□□□ 0.1
VARS-228ENST00000495010 CCDC113Q9H0I3 377 aa15.67■□□□□ 0.1
VARS-228ENST00000495010 AVENQ9NQS1 362 aaPredicted RBP15.67■□□□□ 0.1
VARS-228ENST00000495010 PRMT8Q9NR22 394 aaPredicted RBP15.67■□□□□ 0.1
VARS-228ENST00000495010 TOPORSQ9NS56 1045 aaPredicted RBP15.67■□□□□ 0.1
VARS-228ENST00000495010 VWA8A3KMH1 1905 aa15.66■□□□□ 0.1
VARS-228ENST00000495010 H7C4K7 107 aa15.66■□□□□ 0.1
VARS-228ENST00000495010 FDPSP14324 419 aaKnown RBP15.66■□□□□ 0.1
VARS-228ENST00000495010 ROR1Q01973 937 aa15.66■□□□□ 0.1
VARS-228ENST00000495010 CYP4A22Q5TCH4 519 aa15.66■□□□□ 0.1
VARS-228ENST00000495010 PDZD4Q76G19 769 aaPredicted RBP15.66■□□□□ 0.1
VARS-228ENST00000495010 NELL1Q92832 810 aa15.66■□□□□ 0.1
VARS-228ENST00000495010 IRF7Q92985 503 aa15.66■□□□□ 0.1
VARS-228ENST00000495010 CCDC94Q9BW85 323 aaPredicted RBP15.66■□□□□ 0.1
VARS-228ENST00000495010 CYP4F11Q9HBI6 524 aa15.66■□□□□ 0.1
VARS-228ENST00000495010 GOLGA2P5Q9HBQ8 144 aa15.66■□□□□ 0.1
VARS-228ENST00000495010 SLC38A7Q9NVC3 462 aa15.66■□□□□ 0.1
VARS-228ENST00000495010 SMIM28A0A1B0GU29 152 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms