RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 FKBP1CQ5VVH2 108 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 RAB3IL1Q8TBN0 382 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 FAM118BQ9BPY3 351 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 KCNMB3Q9NPA1 279 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 SLC25A27O95847 323 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 FAM107AO95990 144 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 TBXAS1P24557 533 aaPredicted RBP12□□□□□ -0.49
SMPD4-218ENST00000482171 BBS9Q3SYG4 887 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 C6orf118Q5T5N4 469 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 CEP128Q6ZU80 1094 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 CCHCR1Q8TD31 782 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 PRPF31Q8WWY3 499 aaKnown RBP12□□□□□ -0.49
SMPD4-218ENST00000482171 OPTNQ96CV9 577 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 SEC16BQ96JE7 1060 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 DDX23Q9BUQ8 820 aaKnown RBP12□□□□□ -0.49
SMPD4-218ENST00000482171 TIPINQ9BVW5 301 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 PIN4Q9Y237 131 aaKnown RBP12□□□□□ -0.49
SMPD4-218ENST00000482171 PHRF1Q9P1Y6 1649 aaKnown RBP12□□□□□ -0.49
SMPD4-218ENST00000482171 SYNGAP1Q96PV0 1343 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 ARHGAP42A6NI28 874 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 SART1O43290 800 aaKnown RBP12□□□□□ -0.49
SMPD4-218ENST00000482171 CYP2C8P10632 490 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 HSPA6P17066 643 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 DARS2Q6PI48 645 aaKnown RBP12□□□□□ -0.49
SMPD4-218ENST00000482171 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12□□□□□ -0.49
SMPD4-218ENST00000482171 MYCBPAPQ8TBZ2 947 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 RANBP17Q9H2T7 1088 aaKnown RBP12□□□□□ -0.49
SMPD4-218ENST00000482171 VCX3BQ9H321 246 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 INTUQ9ULD6 942 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 ABCC6O95255 1503 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 MYH2Q9UKX2 1941 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 ARFGEF2Q9Y6D5 1785 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 GOLGA8MH3BSY2 632 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 MCF2LO15068 1137 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 SUPT20HL2P0C7V6 817 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 RARBP10826 455 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 ITGB5P18084 799 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 MAN1A1P33908 653 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 SLC12A3P55017 1021 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 NOP14P78316 857 aaKnown RBP12□□□□□ -0.49
SMPD4-218ENST00000482171 PPP2R5CQ13362 524 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 XRRA1Q6P2D8 792 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 CCDC125Q86Z20 511 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 RBBP8NLQ8NC74 664 aaPredicted RBP12□□□□□ -0.49
SMPD4-218ENST00000482171 TAS1R2Q8TE23 839 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 HEY1Q9Y5J3 304 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 SNX9Q9Y5X1 595 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 LRRC10BA6NIK2 292 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 SLC26A4O43511 780 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 ATP9AO75110 1047 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 ADORA2BP29275 332 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 VGLL4Q14135 290 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 MXD4Q14582 209 aaPredicted RBP12□□□□□ -0.49
SMPD4-218ENST00000482171 TMED2Q15363 201 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 KCNV1Q6PIU1 500 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 ARHGEF18Q6ZSZ5 1173 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 TRAPPC12Q8WVT3 735 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 DHX38Q92620 1227 aaKnown RBP12□□□□□ -0.49
SMPD4-218ENST00000482171 SLC5A5Q92911 643 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 DNAJC19Q96DA6 116 aa12□□□□□ -0.49
SMPD4-218ENST00000482171 GCOM2Q9BZD3 368 aaPredicted RBP12□□□□□ -0.49
SMPD4-218ENST00000482171 EPHB6O15197 1021 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 RTN2O75298 545 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 GH1P01241 217 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 SAT1P21673 171 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 NLRP11P59045 1033 aaKnown RBP11.99□□□□□ -0.49
SMPD4-218ENST00000482171 TNFAIP2Q03169 654 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 ORC1Q13415 861 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 CYB5D1Q6P9G0 228 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 SDCCAG8Q86SQ7 713 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-218ENST00000482171 SIX6OS1Q8N1H7 587 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 RUBCNQ92622 972 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 SGSM3Q96HU1 749 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 THAP2Q9H0W7 228 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 ETNK1Q9HBU6 452 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 TMEM8AQ9HCN3 771 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 WDR91A4D1P6 747 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 F5H423 210 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-218ENST00000482171 RFX1P22670 979 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 RGS7P49802 495 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 ADCY2Q08462 1091 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 FAM102AQ5T9C2 384 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-218ENST00000482171 MMGT1Q8N4V1 131 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 PPP1R13LQ8WUF5 828 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 HDAC7Q8WUI4 952 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 BTBD6Q96KE9 485 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 TRIM51Q9BSJ1 452 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 PITPNM3Q9BZ71 974 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 GINM1Q9NU53 330 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 GPRC5DQ9NZD1 345 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 IRF6O14896 467 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 TTI1O43156 1089 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 SNHG28P0DPA3 235 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 CFAP157Q5JU67 520 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 ATF7IP2Q5U623 682 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 ZNF571Q7Z3V5 609 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-218ENST00000482171 PDCD7Q8N8D1 485 aaKnown RBP11.99□□□□□ -0.49
SMPD4-218ENST00000482171 GBP7Q8N8V2 638 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-218ENST00000482171 ACAP3Q96P50 834 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 LBHD1Q9BQE6 289 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms