RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 ZEB2O60315 1214 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 SPATA31D3P0C874 917 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 GPR15P49685 360 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 TERF2Q15554 542 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 ERCC6LQ2NKX8 1250 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.91□□□□□ -1.62
CMSS1-204ENST00000479555 SPATA31D4Q6ZUB0 917 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 ARHGEF25Q86VW2 580 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 UBR7Q8N806 425 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 ZNF610Q8N9Z0 462 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 OR56A1Q8NGH5 318 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 ATL2Q8NHH9 583 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 SNX33Q8WV41 574 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 MYH16Q9H6N6 1097 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 IFT22Q9H7X7 185 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 KIAA1586Q9HCI6 787 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 PRDM4Q9UKN5 801 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 CLCA2Q9UQC9 943 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 NUDCQ9Y266 331 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 ATP8A1Q9Y2Q0 1164 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 NUMBLQ9Y6R0 609 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 COL11A2P13942 1736 aaPredicted RBP4.91□□□□□ -1.62
CMSS1-204ENST00000479555 PHLDB1Q86UU1 1377 aa4.91□□□□□ -1.62
CMSS1-204ENST00000479555 FHAD1B1AJZ9 1412 aa4.9□□□□□ -1.62
CMSS1-204ENST00000479555 MYADML2A6NDP7 307 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 LRRC3CA6NJW4 275 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 DRGXA6NNA5 263 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 CLGNO14967 610 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 KDM1AO60341 852 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 CDKL5O76039 1030 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 IGLV2-14P01704 120 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 CFIP05156 583 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 HLA-DOAP06340 250 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 PTMAP06454 111 aaKnown RBP4.9□□□□□ -1.63
CMSS1-204ENST00000479555 CDK4P11802 303 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 CTSSP25774 331 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 IL2P60568 153 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 RAP2BP61225 183 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 FAM193AP78312 1265 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 SIM1P81133 766 aaPredicted RBP4.9□□□□□ -1.63
CMSS1-204ENST00000479555 SLC20A2Q08357 652 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 STRN3Q13033 797 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 CT83Q5H943 113 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 PITRM1Q5JRX3 1037 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 B3GNTL1Q67FW5 361 aaPredicted RBP4.9□□□□□ -1.63
CMSS1-204ENST00000479555 AFAP1L2Q8N4X5 818 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 GPATCH3Q96I76 525 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 KCTD10Q9H3F6 313 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 RNF7Q9UBF6 113 aa4.9□□□□□ -1.63
CMSS1-204ENST00000479555 APOBEC2Q9Y235 224 aaKnown RBP4.9□□□□□ -1.63
CMSS1-204ENST00000479555 ALG1L2C9J202 215 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 DYNC1I1O14576 645 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 C1QL1O75973 258 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 MSNP26038 577 aaKnown RBP4.89□□□□□ -1.63
CMSS1-204ENST00000479555 MGAT1P26572 445 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 LSP1P33241 339 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 MCM5P33992 734 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 ADCYAP1R1P41586 468 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 LSSP48449 732 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 LGALS4P56470 323 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 KRTAP10-9P60411 292 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 AMPD3Q01432 767 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 FAPQ12884 760 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 CCDC178Q5BJE1 867 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 EPHA10Q5JZY3 1008 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 ATXN7L2Q5T6C5 722 aaPredicted RBP4.89□□□□□ -1.63
CMSS1-204ENST00000479555 AGAP9Q5VTM2 703 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 RNF219Q5W0B1 726 aaPredicted RBP4.89□□□□□ -1.63
CMSS1-204ENST00000479555 TSHZ3Q63HK5 1081 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 MAPKAPK5Q8IW41 473 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 OR14C36Q8NHC7 312 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 ZNF384Q8TF68 577 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 RNF31Q96EP0 1072 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 ALOXE3Q9BYJ1 711 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 KLHL11Q9NVR0 708 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 CDY2AQ9Y6F7 541 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 MAST3O60307 1309 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 PNPLA7Q6ZV29 1317 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 KTN1Q86UP2 1357 aaKnown RBP4.89□□□□□ -1.63
CMSS1-204ENST00000479555 SCAPERQ9BY12 1400 aa4.89□□□□□ -1.63
CMSS1-204ENST00000479555 ARHGEF17Q96PE2 2063 aaPredicted RBP4.88□□□□□ -1.63
CMSS1-204ENST00000479555 ATAD2BQ9ULI0 1458 aa4.88□□□□□ -1.63
CMSS1-204ENST00000479555 KRTAP29-1A8MX34 341 aaPredicted RBP4.88□□□□□ -1.63
CMSS1-204ENST00000479555 CXorf49A8MYA2 514 aaPredicted RBP4.88□□□□□ -1.63
CMSS1-204ENST00000479555 RBMXL2O75526 392 aaKnown RBP4.88□□□□□ -1.63
CMSS1-204ENST00000479555 C1RP00736 705 aa4.88□□□□□ -1.63
CMSS1-204ENST00000479555 BPIP17213 487 aa4.88□□□□□ -1.63
CMSS1-204ENST00000479555 FDXRP22570 491 aa4.88□□□□□ -1.63
CMSS1-204ENST00000479555 ADSLP30566 484 aaPredicted RBP4.88□□□□□ -1.63
CMSS1-204ENST00000479555 PTPN7P35236 360 aa4.88□□□□□ -1.63
CMSS1-204ENST00000479555 PHC1P78364 1004 aa4.88□□□□□ -1.63
CMSS1-204ENST00000479555 CCT2P78371 535 aaKnown RBP4.88□□□□□ -1.63
CMSS1-204ENST00000479555 DMTNQ08495 405 aa4.88□□□□□ -1.63
CMSS1-204ENST00000479555 MED25Q71SY5 747 aa4.88□□□□□ -1.63
CMSS1-204ENST00000479555 CREBRFQ8IUR6 639 aa4.88□□□□□ -1.63
CMSS1-204ENST00000479555 ZFP28Q8NHY6 868 aa4.88□□□□□ -1.63
CMSS1-204ENST00000479555 WDR66Q8TBY9 1149 aa4.88□□□□□ -1.63
CMSS1-204ENST00000479555 DUSP26Q9BV47 211 aa4.88□□□□□ -1.63
CMSS1-204ENST00000479555 AATKQ6ZMQ8 1374 aa4.88□□□□□ -1.63
CMSS1-204ENST00000479555 CCNB3Q8WWL7 1395 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms