RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 NTPCRQ9BSD7 190 aaKnown RBP14.57□□□□□ -0.08
CPSF4-210ENST00000469897 DAXXQ9UER7 740 aaPredicted RBP14.57□□□□□ -0.08
CPSF4-210ENST00000469897 CDY1Q9Y6F8 540 aa14.57□□□□□ -0.08
CPSF4-210ENST00000469897 NUMBLQ9Y6R0 609 aa14.57□□□□□ -0.08
CPSF4-210ENST00000469897 TMEM189-UBE2V1I3L0A0 370 aa14.56□□□□□ -0.08
CPSF4-210ENST00000469897 ST18O60284 1047 aa14.56□□□□□ -0.08
CPSF4-210ENST00000469897 SRFP11831 508 aa14.56□□□□□ -0.08
CPSF4-210ENST00000469897 HARSP12081 509 aaKnown RBP14.56□□□□□ -0.08
CPSF4-210ENST00000469897 RABEP1Q15276 862 aa14.56□□□□□ -0.08
CPSF4-210ENST00000469897 SEZ6Q53EL9 994 aa14.56□□□□□ -0.08
CPSF4-210ENST00000469897 RILPL1Q5EBL4 403 aa14.56□□□□□ -0.08
CPSF4-210ENST00000469897 PARM1Q6UWI2 310 aa14.56□□□□□ -0.08
CPSF4-210ENST00000469897 ITFG1Q8TB96 612 aa14.56□□□□□ -0.08
CPSF4-210ENST00000469897 SLC7A14Q8TBB6 771 aa14.56□□□□□ -0.08
CPSF4-210ENST00000469897 DDX27Q96GQ7 796 aaKnown RBP14.56□□□□□ -0.08
CPSF4-210ENST00000469897 TMX3Q96JJ7 454 aa14.56□□□□□ -0.08
CPSF4-210ENST00000469897 RTP3Q9BQQ7 232 aa14.56□□□□□ -0.08
CPSF4-210ENST00000469897 C17orf75Q9HAS0 396 aa14.56□□□□□ -0.08
CPSF4-210ENST00000469897 TOPORSQ9NS56 1045 aaPredicted RBP14.56□□□□□ -0.08
CPSF4-210ENST00000469897 ARHGAP28Q9P2N2 729 aa14.56□□□□□ -0.08
CPSF4-210ENST00000469897 MTRRQ9UBK8 725 aa14.56□□□□□ -0.08
CPSF4-210ENST00000469897 CDH7Q9ULB5 785 aa14.56□□□□□ -0.08
CPSF4-210ENST00000469897 KIF3AQ9Y496 699 aa14.56□□□□□ -0.08
CPSF4-210ENST00000469897 BACE2Q9Y5Z0 518 aa14.56□□□□□ -0.08
CPSF4-210ENST00000469897 NPHP3-ACAD11A0A0J9YXS1 232 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 VWA3AA6NCI4 1184 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 H3BQV1 296 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 ABLIM1O14639 778 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 MEFVO15553 781 aaPredicted RBP14.55□□□□□ -0.08
CPSF4-210ENST00000469897 XYLBO75191 536 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 CD2BP2O95400 341 aaKnown RBP14.55□□□□□ -0.08
CPSF4-210ENST00000469897 MCF2P10911 925 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 PROZP22891 400 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 GUCY2CP25092 1073 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 GJB2P29033 226 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 GPC5P78333 572 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 ATP2C1P98194 919 aaPredicted RBP14.55□□□□□ -0.08
CPSF4-210ENST00000469897 HTR4Q13639 388 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 UVSSAQ2YD98 709 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 ANKS3Q6ZW76 656 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 ASCL5Q7RTU5 278 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 SYT2Q8N9I0 419 aaPredicted RBP14.55□□□□□ -0.08
CPSF4-210ENST00000469897 DTWD2Q8NBA8 298 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 FGF13Q92913 245 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 FGF14Q92915 247 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 C18orf25Q96B23 403 aaPredicted RBP14.55□□□□□ -0.08
CPSF4-210ENST00000469897 HCFC1R1Q9NWW0 138 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 DNMT3BQ9UBC3 853 aaKnown RBP14.55□□□□□ -0.08
CPSF4-210ENST00000469897 PHLPP2Q6ZVD8 1323 aa14.55□□□□□ -0.08
CPSF4-210ENST00000469897 ZNF318Q5VUA4 2279 aa14.54□□□□□ -0.08
CPSF4-210ENST00000469897 PROB1E7EW31 1015 aa14.54□□□□□ -0.08
CPSF4-210ENST00000469897 PODXLO00592 558 aa14.54□□□□□ -0.08
CPSF4-210ENST00000469897 PLS3P13797 630 aa14.54□□□□□ -0.08
CPSF4-210ENST00000469897 RFX1P22670 979 aa14.54□□□□□ -0.08
CPSF4-210ENST00000469897 HOXA9P31269 272 aa14.54□□□□□ -0.08
CPSF4-210ENST00000469897 NBL1P41271 181 aa14.54□□□□□ -0.08
CPSF4-210ENST00000469897 SMTNP53814 917 aa14.54□□□□□ -0.08
CPSF4-210ENST00000469897 ARPP19P56211 112 aa14.54□□□□□ -0.08
CPSF4-210ENST00000469897 CACNB1Q02641 598 aaPredicted RBP14.54□□□□□ -0.08
CPSF4-210ENST00000469897 STRN3Q13033 797 aa14.54□□□□□ -0.08
CPSF4-210ENST00000469897 HYIQ5T013 277 aa14.54□□□□□ -0.08
CPSF4-210ENST00000469897 MPZL3Q6UWV2 235 aa14.54□□□□□ -0.08
CPSF4-210ENST00000469897 FRMD5Q7Z6J6 570 aa14.54□□□□□ -0.08
CPSF4-210ENST00000469897 CCDC105Q8IYK2 499 aa14.54□□□□□ -0.08
CPSF4-210ENST00000469897 SPIRE2Q8WWL2 714 aa14.54□□□□□ -0.08
CPSF4-210ENST00000469897 SNX27Q96L92 541 aa14.54□□□□□ -0.08
CPSF4-210ENST00000469897 SLC38A7Q9NVC3 462 aa14.54□□□□□ -0.08
CPSF4-210ENST00000469897 KCNG1Q9UIX4 513 aa14.54□□□□□ -0.08
CPSF4-210ENST00000469897 ZFP37Q9Y6Q3 630 aaPredicted RBP14.54□□□□□ -0.08
CPSF4-210ENST00000469897 CENPBP07199 599 aaPredicted RBP14.53□□□□□ -0.08
CPSF4-210ENST00000469897 PLA2G4BP0C869 781 aa14.53□□□□□ -0.08
CPSF4-210ENST00000469897 KCNE1P15382 129 aa14.53□□□□□ -0.08
CPSF4-210ENST00000469897 RPL9P32969 192 aaKnown RBP14.53□□□□□ -0.08
CPSF4-210ENST00000469897 SLC12A3P55017 1021 aa14.53□□□□□ -0.08
CPSF4-210ENST00000469897 ANGPT1Q15389 498 aa14.53□□□□□ -0.08
CPSF4-210ENST00000469897 SLC10A6Q3KNW5 377 aa14.53□□□□□ -0.08
CPSF4-210ENST00000469897 ARSHQ5FYA8 562 aa14.53□□□□□ -0.08
CPSF4-210ENST00000469897 SPECC1Q5M775 1068 aa14.53□□□□□ -0.08
CPSF4-210ENST00000469897 VARS2Q5ST30 1063 aaKnown RBP14.53□□□□□ -0.08
CPSF4-210ENST00000469897 TMEM161BQ8NDZ6 487 aa14.53□□□□□ -0.08
CPSF4-210ENST00000469897 ZNF461Q8TAF7 563 aa14.53□□□□□ -0.08
CPSF4-210ENST00000469897 CDK5RAP3Q96JB5 506 aa14.53□□□□□ -0.08
CPSF4-210ENST00000469897 TIPINQ9BVW5 301 aa14.53□□□□□ -0.08
CPSF4-210ENST00000469897 TBC1D17Q9HA65 648 aa14.53□□□□□ -0.08
CPSF4-210ENST00000469897 CNTN3Q9P232 1028 aa14.53□□□□□ -0.08
CPSF4-210ENST00000469897 ANKFY1Q9P2R3 1169 aa14.53□□□□□ -0.08
CPSF4-210ENST00000469897 NUB1Q9Y5A7 615 aa14.53□□□□□ -0.08
CPSF4-210ENST00000469897 CLDN3O15551 220 aa14.52□□□□□ -0.09
CPSF4-210ENST00000469897 TOM1L1O75674 476 aa14.52□□□□□ -0.09
CPSF4-210ENST00000469897 ABLIM3O94929 683 aa14.52□□□□□ -0.09
CPSF4-210ENST00000469897 DCNP07585 359 aaKnown RBP14.52□□□□□ -0.09
CPSF4-210ENST00000469897 MAPTP10636 758 aaKnown RBP14.52□□□□□ -0.09
CPSF4-210ENST00000469897 ELF1P32519 619 aa14.52□□□□□ -0.09
CPSF4-210ENST00000469897 MATR3P43243 847 aaKnown RBP eCLIP14.52□□□□□ -0.09
CPSF4-210ENST00000469897 ROR1Q01973 937 aa14.52□□□□□ -0.09
CPSF4-210ENST00000469897 SPAG1Q07617 926 aa14.52□□□□□ -0.09
CPSF4-210ENST00000469897 SNW1Q13573 536 aaKnown RBP14.52□□□□□ -0.09
CPSF4-210ENST00000469897 DHX8Q14562 1220 aaKnown RBP14.52□□□□□ -0.09
CPSF4-210ENST00000469897 PABPC1LQ4VXU2 614 aaKnown RBP14.52□□□□□ -0.09
CPSF4-210ENST00000469897 SLC8B1Q6J4K2 584 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms