RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	GPR62	Q9BZJ7	368 aa		13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	MAN1C1	Q9NR34	630 aa		13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	TSHZ2	Q9NRE2	1034 aa		13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	TBC1D7	Q9P0N9	293 aa		13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	FNIP2	Q9P278	1114 aa		13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	DPP7	Q9UHL4	492 aa		13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	KCNG1	Q9UIX4	513 aa		13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	RBM19	Q9Y4C8	960 aa	Known RBP	13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	PDCD11	Q14690	1871 aa	Known RBP	13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	MYH11	P35749	1972 aa		13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	GOLGA6L4	A6NEF3	574 aa		13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	MYMK	A6NI61	221 aa		13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	TRAK2	O60296	914 aa		13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	RECQL4	O94761	1208 aa		13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	GLUD1	P00367	558 aa		13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	CREM	Q03060	361 aa		13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	USP41	Q3LFD5	358 aa		13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	DCAF4L1	Q3SXM0	396 aa		13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	EEF1DP3	Q658K8	133 aa		13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	ELMSAN1	Q6PJG2	1045 aa		13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	SFR1	Q86XK3	245 aa		13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	SUGP1	Q8IWZ8	645 aa	Known RBP	13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	CEP57L1	Q8IYX8	460 aa		13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	IQUB	Q8NA54	791 aa		13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	PRSS33	Q8NF86	280 aa		13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	TARS2	Q9BW92	718 aa	Known RBP	13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	KLK14	Q9P0G3	267 aa		13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	RCOR1	Q9UKL0	485 aa		13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	GDA	Q9Y2T3	454 aa		13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	CIT	O14578	2027 aa		13.91	□□□□□ -0.18
FDPS-204	ENST00000461507	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.9	□□□□□ -0.18	5e-7	■■■■■ 28.6
FDPS-204	ENST00000461507	C2CD2L	O14523	706 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	NMT1	P30419	496 aa	Known RBP	13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	AFM	P43652	599 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	LIG4	P49917	911 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	NUBP1	P53384	320 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	OSTN	P61366	133 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	ASIC1	P78348	528 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	AMPD3	Q01432	767 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	NT5DC1	Q5TFE4	455 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	RESP18	Q5W5W9	173 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	LILRA6	Q6PI73	481 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	OTOP3	Q7RTS5	596 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	HAUS6	Q7Z4H7	955 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	SPIRE2	Q8WWL2	714 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	PIK3R5	Q8WYR1	880 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	ZNF707	Q96C28	371 aa	Predicted RBP	13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	PAAF1	Q9BRP4	392 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	LRRC27	Q9C0I9	530 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	PLEKHA4	Q9H4M7	779 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	TMEM134	Q9H6X4	195 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	MRPL44	Q9H9J2	332 aa	Known RBP	13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	SNTG2	Q9NY99	539 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507	ARHGAP28	Q9P2N2	729 aa		13.9	□□□□□ -0.18
FDPS-204	ENST00000461507		A0A1B0GVL5	298 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	TMEM189-UBE2V1	I3L0A0	370 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	HNRNPDL	O14979	420 aa	Known RBP	13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	KIF4A	O95239	1232 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	GCNT3	O95395	438 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	MAPT	P10636	758 aa	Known RBP	13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	PFKFB1	P16118	471 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	VCP	P55072	806 aa	Known RBP	13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	NCKAP1L	P55160	1127 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	RTP2	Q5QGT7	225 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	CCDC65	Q8IXS2	484 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	FSIP1	Q8NA03	581 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	TMEM161B	Q8NDZ6	487 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	ACSF2	Q96CM8	615 aa	Predicted RBP	13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	B3GALT6	Q96L58	329 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	PPP1R10	Q96QC0	940 aa	Known RBP	13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	PYM1	Q9BRP8	204 aa	Known RBP	13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	CXCL16	Q9H2A7	254 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	TNMD	Q9H2S6	317 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	CUEDC2	Q9H467	287 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	PTPRH	Q9HD43	1115 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	WDR6	Q9NNW5	1121 aa	Known RBP	13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	PANK4	Q9NVE7	773 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	ZDHHC7	Q9NXF8	308 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	KCNH3	Q9ULD8	1083 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	TNFSF13B	Q9Y275	285 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	CLUH	O75153	1309 aa		13.89	□□□□□ -0.19
FDPS-204	ENST00000461507	CASTOR2	A6NHX0	329 aa		13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	TGM5	O43548	720 aa		13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	PDGFB	P01127	241 aa	Predicted RBP	13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	TH	P07101	528 aa		13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	ASGR2	P07307	311 aa		13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	GAP43	P17677	238 aa		13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	YARS	P54577	528 aa	Known RBP	13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	PTPN5	P54829	565 aa		13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	TCF15	Q12870	199 aa		13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	ELAVL2	Q12926	359 aa	Known RBP	13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	XKR4	Q5GH76	650 aa		13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	IER5L	Q5T953	404 aa		13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	TAS1R3	Q7RTX0	852 aa		13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	NOC3L	Q8WTT2	800 aa	Known RBP	13.88	□□□□□ -0.19
FDPS-204	ENST00000461507	RIN2	Q8WYP3	895 aa	Predicted RBP	13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms