RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 THP07101 528 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 CHRNB1P11230 501 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 PMLP29590 882 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 CCR2P41597 374 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 SATB1Q01826 763 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 SSRP1Q08945 709 aaKnown RBP13.13□□□□□ -0.31
HCFC1-204ENST00000461098 SRSF5Q13243 272 aaKnown RBP13.13□□□□□ -0.31
HCFC1-204ENST00000461098 WDR44Q5JSH3 913 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 FAM78AQ5JUQ0 283 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 NCAPH2Q6IBW4 605 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 GALNT17Q6IS24 598 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 PDXDC1Q6P996 788 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 BLOC1S2Q6QNY1 142 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.13□□□□□ -0.31
HCFC1-204ENST00000461098 PPP4R3CPQ6ZMV5 832 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 KRT25Q7Z3Z0 450 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 POTEDQ86YR6 584 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 TPH2Q8IWU9 490 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 TCEAL4Q96EI5 215 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 HSD17B14Q9BPX1 270 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 IER2Q9BTL4 223 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 FZD8Q9H461 694 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 ZNF334Q9HCZ1 680 aaPredicted RBP13.13□□□□□ -0.31
HCFC1-204ENST00000461098 TRPV5Q9NQA5 729 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 SNTG2Q9NY99 539 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 RAB23Q9ULC3 237 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 KCNJ14Q9UNX9 436 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 RALGAPA1Q6GYQ0 2036 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 CEP295Q9C0D2 2601 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 TMEM189-UBE2V1I3L0A0 370 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 K7ESF4 209 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 ARNTLO00327 626 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 DGAT1O75907 488 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 RECQL4O94761 1208 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 ABLIM3O94929 683 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 DEXIO95424 95 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 HOXC13P31276 330 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 HSPA4P34932 840 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 CCR3P51677 355 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 ELAVL2Q12926 359 aaKnown RBP13.12□□□□□ -0.31
HCFC1-204ENST00000461098 TOB2Q14106 344 aaPredicted RBP13.12□□□□□ -0.31
HCFC1-204ENST00000461098 EARS2Q5JPH6 523 aaKnown RBP13.12□□□□□ -0.31
HCFC1-204ENST00000461098 CDCA2Q69YH5 1023 aaPredicted RBP13.12□□□□□ -0.31
HCFC1-204ENST00000461098 VITQ6UXI7 678 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 PRR23BQ6ZRT6 265 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 NEK8Q86SG6 692 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 FAM177A1Q8N128 213 aaPredicted RBP13.12□□□□□ -0.31
HCFC1-204ENST00000461098 C3orf58Q8NDZ4 430 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 FAM3CQ92520 227 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 DDX27Q96GQ7 796 aaKnown RBP13.12□□□□□ -0.31
HCFC1-204ENST00000461098 ZSWIM3Q96MP5 696 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 ASB16Q96NS5 453 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 EIF2AK1Q9BQI3 630 aaKnown RBP13.12□□□□□ -0.31
HCFC1-204ENST00000461098 POLR3FQ9H1D9 316 aaPredicted RBP13.12□□□□□ -0.31
HCFC1-204ENST00000461098 PDZD7Q9H5P4 517 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 USP20Q9Y2K6 914 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 BACE2Q9Y5Z0 518 aa13.12□□□□□ -0.31
HCFC1-204ENST00000461098 A0A087WWV3 80 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 CCNT1O60563 726 aaKnown RBP13.11□□□□□ -0.31
HCFC1-204ENST00000461098 MOSPD3O75425 235 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 EDN1P05305 212 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 GCFC2P16383 781 aaKnown RBP13.11□□□□□ -0.31
HCFC1-204ENST00000461098 PTPN2P17706 415 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 TKTP29401 623 aaKnown RBP13.11□□□□□ -0.31
HCFC1-204ENST00000461098 CXCL12P48061 93 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 RARRES1P49788 294 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 CLCNKBP51801 687 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 SHC2P98077 582 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 SIM2Q14190 667 aaPredicted RBP13.11□□□□□ -0.31
HCFC1-204ENST00000461098 FAM187BQ17R55 369 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 N4BP2L1Q5TBK1 243 aaPredicted RBP13.11□□□□□ -0.31
HCFC1-204ENST00000461098 SLC8B1Q6J4K2 584 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 NOSTRINQ8IVI9 506 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 TRIM22Q8IYM9 498 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 ZNF461Q8TAF7 563 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 OXER1Q8TDS5 423 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 PRIMPOLQ96LW4 560 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 TRMT61BQ9BVS5 477 aaKnown RBP13.11□□□□□ -0.31
HCFC1-204ENST00000461098 BRD9Q9H8M2 597 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 ZFP14Q9HCL3 533 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 GPRC5CQ9NQ84 441 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 ANKEF1Q9NU02 776 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 C2orf42Q9NWW7 574 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 ANGPTL2Q9UKU9 493 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 TRIP11Q15643 1979 aa13.11□□□□□ -0.31
HCFC1-204ENST00000461098 WDR27A2RRH5 827 aa13.1□□□□□ -0.31
HCFC1-204ENST00000461098 CHURC1-FNTBB4DL54 471 aa13.1□□□□□ -0.31
HCFC1-204ENST00000461098 I3L4J1 428 aa13.1□□□□□ -0.31
HCFC1-204ENST00000461098 B3GAT3O94766 335 aa13.1□□□□□ -0.31
HCFC1-204ENST00000461098 MICAL2O94851 1124 aa13.1□□□□□ -0.31
HCFC1-204ENST00000461098 PAPSS2O95340 614 aaPredicted RBP13.1□□□□□ -0.31
HCFC1-204ENST00000461098 SEC24AO95486 1093 aa13.1□□□□□ -0.31
HCFC1-204ENST00000461098 VIPR2P41587 438 aa13.1□□□□□ -0.31
HCFC1-204ENST00000461098 FNTBP49356 437 aa13.1□□□□□ -0.31
HCFC1-204ENST00000461098 RBM25P49756 843 aaKnown RBP13.1□□□□□ -0.31
HCFC1-204ENST00000461098 ROR1Q01973 937 aa13.1□□□□□ -0.31
HCFC1-204ENST00000461098 PPP2R5DQ14738 602 aa13.1□□□□□ -0.31
HCFC1-204ENST00000461098 UPP1Q16831 310 aa13.1□□□□□ -0.31
HCFC1-204ENST00000461098 PIGOQ8TEQ8 1089 aa13.1□□□□□ -0.31
HCFC1-204ENST00000461098 IRF7Q92985 503 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms