RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 STX10O60499 249 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 ARHGEF15O94989 841 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 GLUD2P49448 558 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 SLC10A6Q3KNW5 377 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 USP41Q3LFD5 358 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 RTL10Q7L3V2 364 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 SYAP1Q96A49 352 aaPredicted RBP11.61□□□□□ -0.55
UBR4-208ENST00000459947 ANKRD36BP1Q96IX9 119 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 FBXL18Q96ME1 805 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 MKNK1Q9BUB5 465 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 DZANK1Q9NVP4 752 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 HSPBP1Q9NZL4 362 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 SYN3O14994 580 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 SLC34A2O95436 690 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 TNNC2P02585 160 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 GRAMD1CQ8IYS0 662 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 APPL2Q8NEU8 664 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 HDAC7Q8WUI4 952 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 ZFP42Q96MM3 310 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 CERS4Q9HA82 394 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 RBAKQ9NYW8 714 aaPredicted RBP11.61□□□□□ -0.55
UBR4-208ENST00000459947 FRMD4BQ9Y2L6 1034 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 DDHD2O94830 711 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 LRRC63Q05C16 580 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 ENOX2Q16206 610 aaKnown RBP11.61□□□□□ -0.55
UBR4-208ENST00000459947 KIAA1841Q6NSI8 718 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 TMC7Q7Z402 723 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 FAM161BQ96MY7 647 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 DNAI2Q9GZS0 605 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 ZBP1Q9H171 429 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 CLSTN2Q9H4D0 955 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 MRPL17Q9NRX2 175 aaKnown RBP11.61□□□□□ -0.55
UBR4-208ENST00000459947 DSEQ9UL01 958 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 MAFFQ9ULX9 164 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 GRM6O15303 877 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 CXCL8P10145 99 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 CASP5P51878 434 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 SPATA1Q5VX52 437 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 FUT10Q6P4F1 479 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 GSTCDQ8NEC7 633 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 MICAL1Q8TDZ2 1067 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 CHAMP1Q96JM3 812 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 FNBP1Q96RU3 617 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 NUP62CLQ9H1M0 184 aa11.61□□□□□ -0.55
UBR4-208ENST00000459947 MEIS3P2A8K0S8 358 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 FAM189A1O60320 539 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 PRR29P0C7W0 189 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 OSTNP61366 133 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 ZNF280BQ86YH2 543 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 WDR49Q8IV35 697 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 MIOSQ9NXC5 875 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 FNIP2Q9P278 1114 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 ITGA11Q9UKX5 1188 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 NUB1Q9Y5A7 615 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 LACTBL1A8MY62 500 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 PODXLO00592 558 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 EXOC3O60645 756 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 KRT13P13646 458 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 CYP26C1Q6V0L0 522 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 KIAA0895Q8NCT3 520 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 TMC2Q8TDI7 906 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 CASP10Q92851 521 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 FAM213AQ9BRX8 229 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 PRG3Q9Y2Y8 225 aaPredicted RBP11.6□□□□□ -0.55
UBR4-208ENST00000459947 FAM163BP0C2L3 166 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 STK4Q13043 487 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 PNOCQ13519 176 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 PSMD6Q15008 389 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 NELFCDQ8IXH7 590 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 VPS52Q8N1B4 723 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 CEP120Q8N960 986 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 TCF25Q9BQ70 676 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 PCDHA5Q9Y5H7 936 aa11.6□□□□□ -0.55
UBR4-208ENST00000459947 EPOPA6NHQ4 379 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 CETN3O15182 167 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 ADH1AP07327 375 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 TMEM191BP0C7N4 346 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 DSG1Q02413 1049 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 ZBTB6Q15916 424 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 SV2CQ496J9 727 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 RNF168Q8IYW5 571 aaPredicted RBP11.59□□□□□ -0.55
UBR4-208ENST00000459947 LRRC52Q8N7C0 313 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 EFHBQ8N7U6 833 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 TLE6Q9H808 572 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 MARCH5Q9NX47 278 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 TNRC18O15417 2968 aaPredicted RBP11.59□□□□□ -0.55
UBR4-208ENST00000459947 SLC16A3O15427 465 aaKnown RBP11.59□□□□□ -0.55
UBR4-208ENST00000459947 TGFB1I1O43294 461 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 NR3C1P04150 777 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 TYMPP19971 482 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 ADSSP30520 456 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 NAB2Q15742 525 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 DUSP6Q16828 381 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 ANKS3Q6ZW76 656 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 CGRRF1Q99675 332 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 RXFP1Q9HBX9 757 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 DNAJB4Q9UDY4 337 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 PCDHB8Q9UN66 801 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 ADGRE1Q14246 886 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 INTS8Q75QN2 995 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms