RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 TCEAL4Q96EI5 215 aa19.04■□□□□ 0.64
UBE2D4-209ENST00000454428 CHAMP1Q96JM3 812 aa19.04■□□□□ 0.64
UBE2D4-209ENST00000454428 SNTG2Q9NY99 539 aa19.04■□□□□ 0.64
UBE2D4-209ENST00000454428 KCNJ14Q9UNX9 436 aa19.04■□□□□ 0.64
UBE2D4-209ENST00000454428 CDY1Q9Y6F8 540 aa19.04■□□□□ 0.64
UBE2D4-209ENST00000454428 TRIP11Q15643 1979 aa19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 HRO43593 1189 aa19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 DEXIO95424 95 aa19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 THP07101 528 aa19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 HSPA4P34932 840 aa19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 ELAVL2Q12926 359 aaKnown RBP19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 SRSF5Q13243 272 aaKnown RBP19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 TOB2Q14106 344 aaPredicted RBP19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 CSRP2Q16527 193 aa19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 FAM78AQ5JUQ0 283 aa19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 PDXDC1Q6P996 788 aa19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 PRR23BQ6ZRT6 265 aa19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 RTL10Q7L3V2 364 aa19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 NEK8Q86SG6 692 aa19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 MAP4K3Q8IVH8 894 aa19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 TRIM22Q8IYM9 498 aa19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 HSD17B14Q9BPX1 270 aa19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 PDZD7Q9H5P4 517 aa19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 LMAN1LQ9HAT1 526 aa19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 RAB23Q9ULC3 237 aa19.03■□□□□ 0.64
UBE2D4-209ENST00000454428 ATRXP46100 2492 aa19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 NCANO14594 1321 aa19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 ARHGEF37A1IGU5 675 aa19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 MAN2B1O00754 1011 aa19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 CCNT1O60563 726 aaKnown RBP19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 DGAT1O75907 488 aa19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 RECQL4O94761 1208 aa19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 LYPLA2O95372 231 aa19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 EDN1P05305 212 aa19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 GCFC2P16383 781 aaKnown RBP19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 CCR2P41597 374 aa19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 IRX6P78412 446 aaPredicted RBP19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 EARS2Q5JPH6 523 aaKnown RBP19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 DDX27Q96GQ7 796 aaKnown RBP19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 EIF2AK1Q9BQI3 630 aaKnown RBP19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 IER2Q9BTL4 223 aa19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 POLR3FQ9H1D9 316 aaPredicted RBP19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 FZD8Q9H461 694 aa19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 ZNF334Q9HCZ1 680 aaPredicted RBP19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 GPRC5CQ9NQ84 441 aa19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 BACE2Q9Y5Z0 518 aa19.02■□□□□ 0.64
UBE2D4-209ENST00000454428 FAM208BQ5VWN6 2430 aa19.02■□□□□ 0.63
UBE2D4-209ENST00000454428 A0A087WWV3 80 aa19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 TMEM189-UBE2V1I3L0A0 370 aa19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 CHRNB1P11230 501 aa19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 TKTP29401 623 aaKnown RBP19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 RARRES1P49788 294 aa19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 CCR3P51677 355 aa19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 FAM187BQ17R55 369 aa19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 WDR44Q5JSH3 913 aa19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 CDCA2Q69YH5 1023 aaPredicted RBP19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 VITQ6UXI7 678 aa19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 FAM177A1Q8N128 213 aaPredicted RBP19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 C3orf58Q8NDZ4 430 aa19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 OXER1Q8TDS5 423 aa19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 ZSWIM3Q96MP5 696 aa19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 ASB16Q96NS5 453 aa19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 BRD9Q9H8M2 597 aa19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 TRPV5Q9NQA5 729 aa19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 ANKEF1Q9NU02 776 aa19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 USP20Q9Y2K6 914 aa19.01■□□□□ 0.63
UBE2D4-209ENST00000454428 CHURC1-FNTBB4DL54 471 aa19■□□□□ 0.63
UBE2D4-209ENST00000454428 PTPN2P17706 415 aa19■□□□□ 0.63
UBE2D4-209ENST00000454428 PMLP29590 882 aa19■□□□□ 0.63
UBE2D4-209ENST00000454428 HOXC13P31276 330 aa19■□□□□ 0.63
UBE2D4-209ENST00000454428 FNTBP49356 437 aa19■□□□□ 0.63
UBE2D4-209ENST00000454428 SIM2Q14190 667 aaPredicted RBP19■□□□□ 0.63
UBE2D4-209ENST00000454428 FAM3CQ92520 227 aa19■□□□□ 0.63
UBE2D4-209ENST00000454428 PRIMPOLQ96LW4 560 aa19■□□□□ 0.63
UBE2D4-209ENST00000454428 TRMT61BQ9BVS5 477 aaKnown RBP19■□□□□ 0.63
UBE2D4-209ENST00000454428 ZFP14Q9HCL3 533 aa19■□□□□ 0.63
UBE2D4-209ENST00000454428 GJB4Q9NTQ9 266 aa19■□□□□ 0.63
UBE2D4-209ENST00000454428 PDCD11Q14690 1871 aaKnown RBP19■□□□□ 0.63
UBE2D4-209ENST00000454428 CCDC194A0A1B0GVG4 234 aa18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 WDR27A2RRH5 827 aa18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 FAM205CA6NFA0 338 aa18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 I3L4J1 428 aa18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 K7ESF4 209 aa18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 ARNTLO00327 626 aa18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 MOSPD3O75425 235 aa18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 ABLIM3O94929 683 aa18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 CXCL12P48061 93 aa18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 CLCNKBP51801 687 aa18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 ROR1Q01973 937 aa18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 SLC8B1Q6J4K2 584 aa18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 PIK3AP1Q6ZUJ8 805 aa18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 NOSTRINQ8IVI9 506 aa18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 PIGOQ8TEQ8 1089 aa18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 PPP1R10Q96QC0 940 aaKnown RBP18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 PRMT7Q9NVM4 692 aaPredicted RBP18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 C2orf42Q9NWW7 574 aa18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 PIAS3Q9Y6X2 628 aa18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 GREB1Q4ZG55 1949 aa18.99■□□□□ 0.63
UBE2D4-209ENST00000454428 LRRIQ4A6NIV6 560 aa18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 TM4SF5O14894 197 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms