RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 DDX1Q92499 740 aaKnown RBP20.27■□□□□ 0.83
SEMA3D-202ENST00000444867 ARHGEF26Q96DR7 871 aa20.27■□□□□ 0.83
SEMA3D-202ENST00000444867 INO80BQ9C086 356 aaPredicted RBP20.27■□□□□ 0.83
SEMA3D-202ENST00000444867 KAT6AQ92794 2004 aa20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 BUB1BO60566 1050 aaPredicted RBP20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 PHACTR2O75167 634 aa20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 ITGBL1O95965 494 aaPredicted RBP20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 MMP3P08254 477 aa20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 MMEP08473 750 aa20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 SMPD1P17405 629 aa20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 POU5F1Q01860 360 aaKnown RBP20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 TAF3Q5VWG9 929 aa20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 CHADLQ6NUI6 762 aa20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 RASAL3Q86YV0 1011 aa20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 OR6J1Q8NGC5 347 aa20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 NPLOC4Q8TAT6 608 aa20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 ACTRT1Q8TDG2 376 aa20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 HES6Q96HZ4 224 aa20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 IMPG2Q9BZV3 1241 aa20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 OSGEPQ9NPF4 335 aa20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 PACSIN2Q9UNF0 486 aaPredicted RBP20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 PCDHB2Q9Y5E7 798 aa20.26■□□□□ 0.83
SEMA3D-202ENST00000444867 H3BRB1 525 aa20.25■□□□□ 0.83
SEMA3D-202ENST00000444867 KCNK3O14649 394 aa20.25■□□□□ 0.83
SEMA3D-202ENST00000444867 SEC31AO94979 1220 aaKnown RBP20.25■□□□□ 0.83
SEMA3D-202ENST00000444867 CLTAP09496 248 aa20.25■□□□□ 0.83
SEMA3D-202ENST00000444867 IGBP1P78318 339 aa20.25■□□□□ 0.83
SEMA3D-202ENST00000444867 NCOA4Q13772 614 aa20.25■□□□□ 0.83
SEMA3D-202ENST00000444867 DGKDQ16760 1214 aa20.25■□□□□ 0.83
SEMA3D-202ENST00000444867 ZNF568Q3ZCX4 644 aa20.25■□□□□ 0.83
SEMA3D-202ENST00000444867 MAP9Q49MG5 647 aa20.25■□□□□ 0.83
SEMA3D-202ENST00000444867 BEND6Q5SZJ8 279 aaPredicted RBP20.25■□□□□ 0.83
SEMA3D-202ENST00000444867 MORN1Q5T089 497 aa20.25■□□□□ 0.83
SEMA3D-202ENST00000444867 C11orf63Q6NUN7 778 aa20.25■□□□□ 0.83
SEMA3D-202ENST00000444867 OR5B17Q8NGF7 314 aa20.25■□□□□ 0.83
SEMA3D-202ENST00000444867 TUT1Q9H6E5 874 aaKnown RBP20.25■□□□□ 0.83
SEMA3D-202ENST00000444867 TBC1D8O95759 1140 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 ZNF286BP0CG31 522 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 TNFSF9P41273 254 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 TNFAIP2Q03169 654 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 MAP2K5Q13163 448 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 DUOXA2Q1HG44 320 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 ACAD10Q6JQN1 1059 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 MTHFD1LQ6UB35 978 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 KRT222Q8N1A0 295 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 SMC1BQ8NDV3 1235 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 MS4A14Q96JA4 679 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 ZHX1Q9UKY1 873 aaPredicted RBP20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 CNTN6Q9UQ52 1028 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 ZEB2O60315 1214 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 B4GALT4O60513 344 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 IL18RAPO95256 599 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 ACO1P21399 889 aaKnown RBP20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 NOP14P78316 857 aaKnown RBP20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 KYAT1Q16773 422 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 TMEM132AQ24JP5 1023 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 CLEC16AQ2KHT3 1053 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 SEZ6Q53EL9 994 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 USP38Q8NB14 1042 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 IFT122Q9HBG6 1241 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 APOBEC3GQ9HC16 384 aaKnown RBP20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 EHD2Q9NZN4 543 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 CTTNBP2NLQ9P2B4 639 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 CPA4Q9UI42 421 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 GTF3C4Q9UKN8 822 aa20.24■□□□□ 0.83
SEMA3D-202ENST00000444867 RRN3P2A6NIE6 340 aa20.23■□□□□ 0.83
SEMA3D-202ENST00000444867 ASS1P00966 412 aaKnown RBP20.23■□□□□ 0.83
SEMA3D-202ENST00000444867 CYP1A2P05177 515 aa20.23■□□□□ 0.83
SEMA3D-202ENST00000444867 GJB1P08034 283 aa20.23■□□□□ 0.83
SEMA3D-202ENST00000444867 HOXC6P09630 235 aa20.23■□□□□ 0.83
SEMA3D-202ENST00000444867 DNA2P51530 1060 aa20.23■□□□□ 0.83
SEMA3D-202ENST00000444867 ZNF157P51786 506 aaPredicted RBP20.23■□□□□ 0.83
SEMA3D-202ENST00000444867 PPFIA1Q13136 1202 aa20.23■□□□□ 0.83
SEMA3D-202ENST00000444867 PPP1R2P3Q6NXS1 205 aa20.23■□□□□ 0.83
SEMA3D-202ENST00000444867 TRIM72Q6ZMU5 477 aa20.23■□□□□ 0.83
SEMA3D-202ENST00000444867 RASGEF1CQ8N431 466 aa20.23■□□□□ 0.83
SEMA3D-202ENST00000444867 FAM84AQ96KN4 292 aa20.23■□□□□ 0.83
SEMA3D-202ENST00000444867 FUT8Q9BYC5 575 aa20.23■□□□□ 0.83
SEMA3D-202ENST00000444867 CDT1Q9H211 546 aa20.23■□□□□ 0.83
SEMA3D-202ENST00000444867 GOLPH3Q9H4A6 298 aa20.23■□□□□ 0.83
SEMA3D-202ENST00000444867 UVRAGQ9P2Y5 699 aa20.23■□□□□ 0.83
SEMA3D-202ENST00000444867 COG5Q9UP83 839 aa20.23■□□□□ 0.83
SEMA3D-202ENST00000444867 AKT3Q9Y243 479 aa20.23■□□□□ 0.83
SEMA3D-202ENST00000444867 SPDYE4A6NLX3 237 aa20.22■□□□□ 0.83
SEMA3D-202ENST00000444867 MIF4GDA9UHW6 222 aaKnown RBP20.22■□□□□ 0.83
SEMA3D-202ENST00000444867 MCF2P10911 925 aa20.22■□□□□ 0.83
SEMA3D-202ENST00000444867 TAF1CQ15572 869 aaPredicted RBP20.22■□□□□ 0.83
SEMA3D-202ENST00000444867 CLUL1Q15846 466 aa20.22■□□□□ 0.83
SEMA3D-202ENST00000444867 GRIK4Q16099 956 aa20.22■□□□□ 0.83
SEMA3D-202ENST00000444867 SPOPLQ6IQ16 392 aa20.22■□□□□ 0.83
SEMA3D-202ENST00000444867 HDXQ7Z353 690 aa20.22■□□□□ 0.83
SEMA3D-202ENST00000444867 TRIM11Q96F44 468 aa20.22■□□□□ 0.83
SEMA3D-202ENST00000444867 ARID3AQ99856 593 aa20.22■□□□□ 0.83
SEMA3D-202ENST00000444867 MINDY3Q9H8M7 445 aa20.22■□□□□ 0.83
SEMA3D-202ENST00000444867 ACP6Q9NPH0 428 aa20.22■□□□□ 0.83
SEMA3D-202ENST00000444867 RBM12Q9NTZ6 932 aaKnown RBP20.22■□□□□ 0.83
SEMA3D-202ENST00000444867 RNF216Q9NWF9 866 aaPredicted RBP20.22■□□□□ 0.83
SEMA3D-202ENST00000444867 SMARCAL1Q9NZC9 954 aa20.22■□□□□ 0.83
SEMA3D-202ENST00000444867 TTC7AQ9ULT0 858 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms