RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 ANP32AP39687 249 aaKnown RBP6.38□□□□□ -1.39
LINC00458-202ENST00000427299 NBPF8Q3BBV2 869 aa6.38□□□□□ -1.39
LINC00458-202ENST00000427299 ZKSCAN2Q63HK3 967 aa6.38□□□□□ -1.39
LINC00458-202ENST00000427299 ESPNLQ6ZVH7 1005 aa6.38□□□□□ -1.39
LINC00458-202ENST00000427299 PLXDC1Q8IUK5 500 aa6.38□□□□□ -1.39
LINC00458-202ENST00000427299 PPM1KQ8N3J5 372 aa6.38□□□□□ -1.39
LINC00458-202ENST00000427299 AFAP1L2Q8N4X5 818 aa6.38□□□□□ -1.39
LINC00458-202ENST00000427299 CHAC2Q8WUX2 184 aa6.38□□□□□ -1.39
LINC00458-202ENST00000427299 COQ10AQ96MF6 247 aa6.38□□□□□ -1.39
LINC00458-202ENST00000427299 FAM126AQ9BYI3 521 aaPredicted RBP6.38□□□□□ -1.39
LINC00458-202ENST00000427299 RNF123Q5XPI4 1314 aa6.38□□□□□ -1.39
LINC00458-202ENST00000427299 BLMP54132 1417 aaPredicted RBP6.38□□□□□ -1.39
LINC00458-202ENST00000427299 A2MP01023 1474 aa6.38□□□□□ -1.39
LINC00458-202ENST00000427299 ABCA9Q8IUA7 1624 aa6.38□□□□□ -1.39
LINC00458-202ENST00000427299 ZC3H13Q5T200 1668 aaKnown RBP6.38□□□□□ -1.39
LINC00458-202ENST00000427299 SCAPERQ9BY12 1400 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 PARD3Q8TEW0 1356 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 WASHC2CQ9Y4E1 1318 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 ST20-MTHFSA0A0A6YYL1 179 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 PRR5-ARHGAP8B1AHC4 643 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 NDUFA10O95299 355 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 CD38P28907 300 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 AVPR1BP47901 424 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 GPR15P49685 360 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 DSG1Q02413 1049 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 PCBP1Q15365 356 aaKnown RBP eCLIP6.37□□□□□ -1.39
LINC00458-202ENST00000427299 CCDC178Q5BJE1 867 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 DRICH1Q6PGQ1 229 aaPredicted RBP6.37□□□□□ -1.39
LINC00458-202ENST00000427299 KIF18BQ86Y91 864 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 LCORLQ8N3X6 602 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 GAB3Q8WWW8 586 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 TEX101Q9BY14 249 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 MSRAQ9UJ68 235 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 USP18Q9UMW8 372 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 CLCA2Q9UQC9 943 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 ZKSCAN5Q9Y2L8 839 aa6.37□□□□□ -1.39
LINC00458-202ENST00000427299 UHRF1BP1LA0JNW5 1464 aa6.36□□□□□ -1.39
LINC00458-202ENST00000427299 EIF3AQ14152 1382 aaKnown RBP6.36□□□□□ -1.39
LINC00458-202ENST00000427299 ZNF644Q9H582 1327 aaPredicted RBP6.36□□□□□ -1.39
LINC00458-202ENST00000427299 DIRC3C9JPN6 131 aa6.36□□□□□ -1.39
LINC00458-202ENST00000427299 TGM5O43548 720 aa6.36□□□□□ -1.39
LINC00458-202ENST00000427299 EYA4O95677 639 aa6.36□□□□□ -1.39
LINC00458-202ENST00000427299 SEC24CP53992 1094 aa6.36□□□□□ -1.39
LINC00458-202ENST00000427299 ATXN1P54253 815 aaKnown RBP6.36□□□□□ -1.39
LINC00458-202ENST00000427299 RNASE9P60153 205 aaKnown RBP6.36□□□□□ -1.39
LINC00458-202ENST00000427299 NHLH2Q02577 135 aa6.36□□□□□ -1.39
LINC00458-202ENST00000427299 CNNM4Q6P4Q7 775 aa6.36□□□□□ -1.39
LINC00458-202ENST00000427299 RD3Q7Z3Z2 195 aa6.36□□□□□ -1.39
LINC00458-202ENST00000427299 CMTR2Q8IYT2 770 aaKnown RBP6.36□□□□□ -1.39
LINC00458-202ENST00000427299 AHI1Q8N157 1196 aa6.36□□□□□ -1.39
LINC00458-202ENST00000427299 FERMT2Q96AC1 680 aa6.36□□□□□ -1.39
LINC00458-202ENST00000427299 CLTCL1P53675 1640 aa6.36□□□□□ -1.39
LINC00458-202ENST00000427299 USP32Q8NFA0 1604 aa6.36□□□□□ -1.39
LINC00458-202ENST00000427299 hCG_2014768A0A024R1R8 64 aa6.35□□□□□ -1.39
LINC00458-202ENST00000427299 MARCH11A6NNE9 402 aa6.35□□□□□ -1.39
LINC00458-202ENST00000427299 ZNF891A8MT65 544 aaPredicted RBP6.35□□□□□ -1.39
LINC00458-202ENST00000427299 NRP2O60462 931 aa6.35□□□□□ -1.39
LINC00458-202ENST00000427299 GAS7O60861 476 aa6.35□□□□□ -1.39
LINC00458-202ENST00000427299 IBSPP21815 317 aaPredicted RBP6.35□□□□□ -1.39
LINC00458-202ENST00000427299 SOX5P35711 763 aa6.35□□□□□ -1.39
LINC00458-202ENST00000427299 IGBP1P78318 339 aa6.35□□□□□ -1.39
LINC00458-202ENST00000427299 FOXI1Q12951 378 aa6.35□□□□□ -1.39
LINC00458-202ENST00000427299 SEPT7Q16181 437 aaKnown RBP6.35□□□□□ -1.39
LINC00458-202ENST00000427299 PRR16Q569H4 304 aa6.35□□□□□ -1.39
LINC00458-202ENST00000427299 GPR158Q5T848 1215 aa6.35□□□□□ -1.39
LINC00458-202ENST00000427299 NXPE1Q8N323 547 aa6.35□□□□□ -1.39
LINC00458-202ENST00000427299 CPEB3Q8NE35 698 aaKnown RBP6.35□□□□□ -1.39
LINC00458-202ENST00000427299 CHTF18Q8WVB6 975 aa6.35□□□□□ -1.39
LINC00458-202ENST00000427299 CCDC136Q96JN2 1154 aa6.35□□□□□ -1.39
LINC00458-202ENST00000427299 MAP3K4Q9Y6R4 1608 aa6.35□□□□□ -1.39
LINC00458-202ENST00000427299 PIPSLA2A3N6 862 aa6.34□□□□□ -1.39
LINC00458-202ENST00000427299 ZNF185O15231 689 aa6.34□□□□□ -1.39
LINC00458-202ENST00000427299 MGAT5Q09328 741 aa6.34□□□□□ -1.39
LINC00458-202ENST00000427299 UBE3CQ15386 1083 aa6.34□□□□□ -1.39
LINC00458-202ENST00000427299 PDCD4Q53EL6 469 aaKnown RBP6.34□□□□□ -1.39
LINC00458-202ENST00000427299 LMBR1LQ6UX01 489 aa6.34□□□□□ -1.39
LINC00458-202ENST00000427299 STRA8Q7Z7C7 330 aa6.34□□□□□ -1.39
LINC00458-202ENST00000427299 UBR7Q8N806 425 aa6.34□□□□□ -1.39
LINC00458-202ENST00000427299 OR10H5Q8NGA6 315 aa6.34□□□□□ -1.39
LINC00458-202ENST00000427299 ADAM2Q99965 735 aa6.34□□□□□ -1.39
LINC00458-202ENST00000427299 SPON1Q9HCB6 807 aa6.34□□□□□ -1.39
LINC00458-202ENST00000427299 THG1LQ9NWX6 298 aaKnown RBP6.34□□□□□ -1.39
LINC00458-202ENST00000427299 TMPRSS11EQ9UL52 423 aa6.34□□□□□ -1.39
LINC00458-202ENST00000427299 ATP8A1Q9Y2Q0 1164 aa6.34□□□□□ -1.39
LINC00458-202ENST00000427299 ABCA6Q8N139 1617 aa6.34□□□□□ -1.39
LINC00458-202ENST00000427299 ATP7AQ04656 1500 aa6.34□□□□□ -1.39
LINC00458-202ENST00000427299 MYOM2P54296 1465 aa6.34□□□□□ -1.4
LINC00458-202ENST00000427299 VWDEQ8N2E2 1590 aa6.33□□□□□ -1.4
LINC00458-202ENST00000427299 PRSS38A1L453 326 aa6.33□□□□□ -1.4
LINC00458-202ENST00000427299 KPNA6O60684 536 aa6.33□□□□□ -1.4
LINC00458-202ENST00000427299 HKR1P10072 659 aa6.33□□□□□ -1.4
LINC00458-202ENST00000427299 XPAP23025 273 aaPredicted RBP6.33□□□□□ -1.4
LINC00458-202ENST00000427299 NRG3P56975 720 aa6.33□□□□□ -1.4
LINC00458-202ENST00000427299 KRTAP10-11P60412 298 aa6.33□□□□□ -1.4
LINC00458-202ENST00000427299 IRX6P78412 446 aaPredicted RBP6.33□□□□□ -1.4
LINC00458-202ENST00000427299 GUCY1B3Q02153 619 aa6.33□□□□□ -1.4
LINC00458-202ENST00000427299 DHCR24Q15392 516 aa6.33□□□□□ -1.4
LINC00458-202ENST00000427299 ANKS6Q68DC2 871 aa6.33□□□□□ -1.4
LINC00458-202ENST00000427299 FBXO42Q6P3S6 717 aa6.33□□□□□ -1.4
LINC00458-202ENST00000427299 LYSMD2Q8IV50 215 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms