RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 PLCD3Q8N3E9 789 aa20.22■□□□□ 0.83
NUP50-207ENST00000424634 SNX27Q96L92 541 aa20.22■□□□□ 0.83
NUP50-207ENST00000424634 WDR6Q9NNW5 1121 aaKnown RBP20.22■□□□□ 0.83
NUP50-207ENST00000424634 TOPORSQ9NS56 1045 aaPredicted RBP20.22■□□□□ 0.83
NUP50-207ENST00000424634 I3L4J1 428 aa20.21■□□□□ 0.83
NUP50-207ENST00000424634 KCNE1P15382 129 aa20.21■□□□□ 0.83
NUP50-207ENST00000424634 CREMQ03060 361 aa20.21■□□□□ 0.83
NUP50-207ENST00000424634 ELAVL2Q12926 359 aaKnown RBP20.21■□□□□ 0.83
NUP50-207ENST00000424634 SLC10A6Q3KNW5 377 aa20.21■□□□□ 0.83
NUP50-207ENST00000424634 SPECC1Q5M775 1068 aa20.21■□□□□ 0.83
NUP50-207ENST00000424634 CYP26C1Q6V0L0 522 aa20.21■□□□□ 0.83
NUP50-207ENST00000424634 ZPBP2Q6X784 338 aa20.21■□□□□ 0.83
NUP50-207ENST00000424634 OTOP3Q7RTS5 596 aa20.21■□□□□ 0.83
NUP50-207ENST00000424634 SMG7Q92540 1137 aaKnown RBP20.21■□□□□ 0.83
NUP50-207ENST00000424634 RAD54LQ92698 747 aa20.21■□□□□ 0.83
NUP50-207ENST00000424634 EPSTI1Q96J88 318 aa20.21■□□□□ 0.83
NUP50-207ENST00000424634 UROC1Q96N76 676 aa20.21■□□□□ 0.83
NUP50-207ENST00000424634 PDCD11Q14690 1871 aaKnown RBP20.21■□□□□ 0.83
NUP50-207ENST00000424634 DOCK8Q8NF50 2099 aa20.21■□□□□ 0.83
NUP50-207ENST00000424634 PDGFBP01127 241 aaPredicted RBP20.2■□□□□ 0.82
NUP50-207ENST00000424634 MARCKSP29966 332 aaPredicted RBP20.2■□□□□ 0.82
NUP50-207ENST00000424634 BRCC3P46736 316 aa20.2■□□□□ 0.82
NUP50-207ENST00000424634 MTMR3Q13615 1198 aa20.2■□□□□ 0.82
NUP50-207ENST00000424634 IER5LQ5T953 404 aa20.2■□□□□ 0.82
NUP50-207ENST00000424634 ELMSAN1Q6PJG2 1045 aa20.2■□□□□ 0.82
NUP50-207ENST00000424634 RSPO2Q6UXX9 243 aaPredicted RBP20.2■□□□□ 0.82
NUP50-207ENST00000424634 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.2■□□□□ 0.82
NUP50-207ENST00000424634 HAUS6Q7Z4H7 955 aa20.2■□□□□ 0.82
NUP50-207ENST00000424634 FBXL6Q8N531 539 aa20.2■□□□□ 0.82
NUP50-207ENST00000424634 KCNN1Q92952 543 aa20.2■□□□□ 0.82
NUP50-207ENST00000424634 C18orf25Q96B23 403 aaPredicted RBP20.2■□□□□ 0.82
NUP50-207ENST00000424634 ACSF2Q96CM8 615 aaPredicted RBP20.2■□□□□ 0.82
NUP50-207ENST00000424634 INTS4Q96HW7 963 aaKnown RBP20.2■□□□□ 0.82
NUP50-207ENST00000424634 PRKD2Q9BZL6 878 aa20.2■□□□□ 0.82
NUP50-207ENST00000424634 CCSER1Q9C0I3 900 aa20.2■□□□□ 0.82
NUP50-207ENST00000424634 FOXD4L1Q9NU39 408 aa20.2■□□□□ 0.82
NUP50-207ENST00000424634 CNTN3Q9P232 1028 aa20.2■□□□□ 0.82
NUP50-207ENST00000424634 LARSQ9P2J5 1176 aaKnown RBP20.2■□□□□ 0.82
NUP50-207ENST00000424634 ANKFY1Q9P2R3 1169 aa20.2■□□□□ 0.82
NUP50-207ENST00000424634 ODF2LQ9ULJ1 636 aa20.2■□□□□ 0.82
NUP50-207ENST00000424634 ZMYND10O75800 440 aa20.19■□□□□ 0.82
NUP50-207ENST00000424634 TKTP29401 623 aaKnown RBP20.19■□□□□ 0.82
NUP50-207ENST00000424634 ZNF131P52739 623 aa20.19■□□□□ 0.82
NUP50-207ENST00000424634 MCL1Q07820 350 aa20.19■□□□□ 0.82
NUP50-207ENST00000424634 NOLC1Q14978 699 aaKnown RBP eCLIP20.19■□□□□ 0.82
NUP50-207ENST00000424634 UBALD2Q8IYN6 164 aa20.19■□□□□ 0.82
NUP50-207ENST00000424634 TMEM130Q8N3G9 435 aa20.19■□□□□ 0.82
NUP50-207ENST00000424634 MYCT1Q8N699 235 aa20.19■□□□□ 0.82
NUP50-207ENST00000424634 FIZ1Q96SL8 496 aa20.19■□□□□ 0.82
NUP50-207ENST00000424634 ZDHHC7Q9NXF8 308 aa20.19■□□□□ 0.82
NUP50-207ENST00000424634 FBXO2Q9UK22 296 aaPredicted RBP20.19■□□□□ 0.82
NUP50-207ENST00000424634 FBXW11Q9UKB1 542 aa20.19■□□□□ 0.82
NUP50-207ENST00000424634 MTMR6Q9Y217 621 aa20.19■□□□□ 0.82
NUP50-207ENST00000424634 KMT2EQ8IZD2 1858 aa20.18■□□□□ 0.82
NUP50-207ENST00000424634 CLDN3O15551 220 aa20.18■□□□□ 0.82
NUP50-207ENST00000424634 OR1D2P34982 312 aa20.18■□□□□ 0.82
NUP50-207ENST00000424634 DDIT3P35638 169 aa20.18■□□□□ 0.82
NUP50-207ENST00000424634 RAB33AQ14088 237 aa20.18■□□□□ 0.82
NUP50-207ENST00000424634 DDX27Q96GQ7 796 aaKnown RBP20.18■□□□□ 0.82
NUP50-207ENST00000424634 CLIC6Q96NY7 704 aa20.18■□□□□ 0.82
NUP50-207ENST00000424634 MYADMQ96S97 322 aa20.18■□□□□ 0.82
NUP50-207ENST00000424634 KCNK12Q9HB15 430 aa20.18■□□□□ 0.82
NUP50-207ENST00000424634 SLC38A7Q9NVC3 462 aa20.18■□□□□ 0.82
NUP50-207ENST00000424634 MTRRQ9UBK8 725 aa20.18■□□□□ 0.82
NUP50-207ENST00000424634 TBX20Q9UMR3 447 aa20.18■□□□□ 0.82
NUP50-207ENST00000424634 SRPRBQ9Y5M8 271 aaKnown RBP20.18■□□□□ 0.82
NUP50-207ENST00000424634 CLUHO75153 1309 aa20.18■□□□□ 0.82
NUP50-207ENST00000424634 PODXLO00592 558 aa20.17■□□□□ 0.82
NUP50-207ENST00000424634 FAM13AO94988 1023 aa20.17■□□□□ 0.82
NUP50-207ENST00000424634 VCPP55072 806 aaKnown RBP20.17■□□□□ 0.82
NUP50-207ENST00000424634 CEBPZQ03701 1054 aaKnown RBP20.17■□□□□ 0.82
NUP50-207ENST00000424634 PDXDC1Q6P996 788 aa20.17■□□□□ 0.82
NUP50-207ENST00000424634 RASSF8Q8NHQ8 419 aa20.17■□□□□ 0.82
NUP50-207ENST00000424634 LARP4BQ92615 738 aaKnown RBP20.17■□□□□ 0.82
NUP50-207ENST00000424634 KCNH6Q9H252 994 aa20.17■□□□□ 0.82
NUP50-207ENST00000424634 PIDD1Q9HB75 910 aa20.17■□□□□ 0.82
NUP50-207ENST00000424634 PARVGQ9HBI0 331 aa20.17■□□□□ 0.82
NUP50-207ENST00000424634 H0YCG3 227 aa20.16■□□□□ 0.82
NUP50-207ENST00000424634 K7ELQ4 463 aaPredicted RBP20.16■□□□□ 0.82
NUP50-207ENST00000424634 TRAPPC3O43617 180 aa20.16■□□□□ 0.82
NUP50-207ENST00000424634 TRAK2O60296 914 aa20.16■□□□□ 0.82
NUP50-207ENST00000424634 CXCL8P10145 99 aa20.16■□□□□ 0.82
NUP50-207ENST00000424634 TNFSF9P41273 254 aa20.16■□□□□ 0.82
NUP50-207ENST00000424634 SPAG1Q07617 926 aa20.16■□□□□ 0.82
NUP50-207ENST00000424634 ZBTB41Q5SVQ8 909 aa20.16■□□□□ 0.82
NUP50-207ENST00000424634 SUGP1Q8IWZ8 645 aaKnown RBP20.16■□□□□ 0.82
NUP50-207ENST00000424634 BACE2Q9Y5Z0 518 aa20.16■□□□□ 0.82
NUP50-207ENST00000424634 CDY1Q9Y6F8 540 aa20.16■□□□□ 0.82
NUP50-207ENST00000424634 NOTCH4Q99466 2003 aa20.15■□□□□ 0.82
NUP50-207ENST00000424634 TTC26A0AVF1 554 aa20.15■□□□□ 0.82
NUP50-207ENST00000424634 FAM189A1O60320 539 aa20.15■□□□□ 0.82
NUP50-207ENST00000424634 PIGRP01833 764 aa20.15■□□□□ 0.82
NUP50-207ENST00000424634 KRT18P05783 430 aaKnown RBP20.15■□□□□ 0.82
NUP50-207ENST00000424634 C8AP07357 584 aa20.15■□□□□ 0.82
NUP50-207ENST00000424634 NMT1P30419 496 aaKnown RBP20.15■□□□□ 0.82
NUP50-207ENST00000424634 GBP2P32456 591 aaPredicted RBP20.15■□□□□ 0.82
NUP50-207ENST00000424634 RPL9P32969 192 aaKnown RBP20.15■□□□□ 0.82
NUP50-207ENST00000424634 MATR3P43243 847 aaKnown RBP eCLIP20.15■□□□□ 0.82
NUP50-207ENST00000424634 TDGQ13569 410 aa20.15■□□□□ 0.82
NUP50-207ENST00000424634 SLC39A4Q6P5W5 647 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms