RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 GOLGA4Q13439 2230 aaKnown RBP14.28□□□□□ -0.12
COL6A2-204ENST00000409416 MYH11P35749 1972 aa14.28□□□□□ -0.12
COL6A2-204ENST00000409416 A0A0A6YYK5 440 aaPredicted RBP14.27□□□□□ -0.12
COL6A2-204ENST00000409416 ADM5C9JUS6 153 aa14.27□□□□□ -0.12
COL6A2-204ENST00000409416 CES2O00748 559 aa14.27□□□□□ -0.12
COL6A2-204ENST00000409416 EIF3DO15371 548 aaKnown RBP eCLIP14.27□□□□□ -0.12
COL6A2-204ENST00000409416 CPP00450 1065 aa14.27□□□□□ -0.12
COL6A2-204ENST00000409416 NLRP11P59045 1033 aaKnown RBP14.27□□□□□ -0.12
COL6A2-204ENST00000409416 SEPT7Q16181 437 aaKnown RBP14.27□□□□□ -0.12
COL6A2-204ENST00000409416 BMT2Q1RMZ1 405 aa14.27□□□□□ -0.12
COL6A2-204ENST00000409416 HIBCHQ6NVY1 386 aaPredicted RBP14.27□□□□□ -0.12
COL6A2-204ENST00000409416 FAM43BQ6ZT52 329 aaPredicted RBP14.27□□□□□ -0.12
COL6A2-204ENST00000409416 INTS8Q75QN2 995 aaKnown RBP14.27□□□□□ -0.12
COL6A2-204ENST00000409416 PLEKHO2Q8TD55 490 aa14.27□□□□□ -0.12
COL6A2-204ENST00000409416 ATP8B4Q8TF62 1192 aa14.27□□□□□ -0.12
COL6A2-204ENST00000409416 PCDHB18PQ96TA0 734 aa14.27□□□□□ -0.12
COL6A2-204ENST00000409416 PLCD4Q9BRC7 762 aa14.27□□□□□ -0.12
COL6A2-204ENST00000409416 CARD9Q9H257 536 aa14.27□□□□□ -0.12
COL6A2-204ENST00000409416 SLC24A3Q9HC58 644 aa14.27□□□□□ -0.12
COL6A2-204ENST00000409416 JPH1Q9HDC5 661 aaPredicted RBP14.27□□□□□ -0.12
COL6A2-204ENST00000409416 CTNNAL1Q9UBT7 734 aa14.27□□□□□ -0.12
COL6A2-204ENST00000409416 STK24Q9Y6E0 443 aa14.27□□□□□ -0.12
COL6A2-204ENST00000409416 RASGRF2O14827 1237 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 SPAG7O75391 227 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 ICAM1P05362 532 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 PLS3P13797 630 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 SCP2P22307 547 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 RASGEF1CQ8N431 466 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 CCDC197Q8NCU1 140 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 GMCL1P1Q8NEA9 526 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 R3HDMLQ9H3Y0 253 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 ACTR2P61160 394 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 IFRD2Q12894 506 aaPredicted RBP14.27□□□□□ -0.13
COL6A2-204ENST00000409416 BIRC2Q13490 618 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 KYNUQ16719 465 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 AGBL2Q5U5Z8 902 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 TTC27Q6P3X3 843 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 ANO5Q75V66 913 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 RHOT2Q8IXI1 618 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 RNF169Q8NCN4 708 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 TACO1Q9BSH4 297 aaKnown RBP14.27□□□□□ -0.13
COL6A2-204ENST00000409416 DDX23Q9BUQ8 820 aaKnown RBP14.27□□□□□ -0.13
COL6A2-204ENST00000409416 OSBPL7Q9BZF2 842 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 AGO4Q9HCK5 861 aaKnown RBP14.27□□□□□ -0.13
COL6A2-204ENST00000409416 RBAKQ9NYW8 714 aaPredicted RBP14.27□□□□□ -0.13
COL6A2-204ENST00000409416 INTUQ9ULD6 942 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 BTAF1O14981 1849 aa14.27□□□□□ -0.13
COL6A2-204ENST00000409416 GTPBP10A4D1E9 387 aaKnown RBP14.26□□□□□ -0.13
COL6A2-204ENST00000409416 DNM1LO00429 736 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 VIL1P09327 827 aaKnown RBP14.26□□□□□ -0.13
COL6A2-204ENST00000409416 POTEJP0CG39 1038 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 TRAF1Q13077 416 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 STYK1Q6J9G0 422 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 LRRC34Q8IZ02 419 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 EMC1Q8N766 993 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 PRELID2Q8N945 189 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 CALN1Q9BXU9 219 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 PABPC3Q9H361 631 aaKnown RBP14.26□□□□□ -0.13
COL6A2-204ENST00000409416 ADAM22Q9P0K1 906 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 SYNGAP1Q96PV0 1343 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 PHF2O75151 1096 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 GGPS1O95749 300 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 ZSCAN5DPP0CG00 497 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 CIITAP33076 1130 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 CLCN3P51790 818 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 CDH8P55286 799 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 TMEM63BQ5T3F8 832 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 TBC1D1Q86TI0 1168 aaPredicted RBP14.26□□□□□ -0.13
COL6A2-204ENST00000409416 ANKMY2Q8IV38 441 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 FBXL13Q8NEE6 735 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 CRYGNQ8WXF5 182 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.26□□□□□ -0.132e-6■■■■■ 76.2
COL6A2-204ENST00000409416 KIFAP3Q92845 792 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 ZSWIM1Q9BR11 485 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 GPR88Q9GZN0 384 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 RAB20Q9NX57 234 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 SLC9A2Q9UBY0 812 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 TBX20Q9UMR3 447 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 EXOC7Q9UPT5 735 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 UMODL1Q5DID0 1318 aa14.26□□□□□ -0.13
COL6A2-204ENST00000409416 WNK3Q9BYP7 1800 aa14.25□□□□□ -0.13
COL6A2-204ENST00000409416 CCND2P30279 289 aa14.25□□□□□ -0.13
COL6A2-204ENST00000409416 TNFSF9P41273 254 aa14.25□□□□□ -0.13
COL6A2-204ENST00000409416 MMP14P50281 582 aa14.25□□□□□ -0.13
COL6A2-204ENST00000409416 DUPD1Q68J44 220 aa14.25□□□□□ -0.13
COL6A2-204ENST00000409416 KRT39Q6A163 491 aa14.25□□□□□ -0.13
COL6A2-204ENST00000409416 SLC5A5Q92911 643 aa14.25□□□□□ -0.13
COL6A2-204ENST00000409416 ATP6V0A1Q93050 837 aa14.25□□□□□ -0.13
COL6A2-204ENST00000409416 BORCS6Q96GS4 357 aa14.25□□□□□ -0.13
COL6A2-204ENST00000409416 AGO2Q9UKV8 859 aaKnown RBP14.25□□□□□ -0.13
COL6A2-204ENST00000409416 AKT3Q9Y243 479 aa14.25□□□□□ -0.13
COL6A2-204ENST00000409416 KIAA0391O15091 583 aaKnown RBP14.25□□□□□ -0.13
COL6A2-204ENST00000409416 ZNF862O60290 1169 aa14.25□□□□□ -0.13
COL6A2-204ENST00000409416 NEBLO76041 1014 aa14.25□□□□□ -0.13
COL6A2-204ENST00000409416 RPSAP08865 295 aaKnown RBP14.25□□□□□ -0.13
COL6A2-204ENST00000409416 TMEM191BP0C7N4 346 aa14.25□□□□□ -0.13
COL6A2-204ENST00000409416 EIF3BP55884 814 aaKnown RBP14.25□□□□□ -0.13
COL6A2-204ENST00000409416 IRX4P78413 519 aa14.25□□□□□ -0.13
COL6A2-204ENST00000409416 SRRM1Q8IYB3 904 aaKnown RBP14.25□□□□□ -0.13
COL6A2-204ENST00000409416 HSPH1Q92598 858 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms