RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 MFSD4BQ5TF39 518 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 C11orf57Q6ZUT1 292 aaPredicted RBP3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 COLGALT2Q8IYK4 626 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 WNT8BQ93098 351 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 FGFBP2Q9BYJ0 223 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 GBP3Q9H0R5 595 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 POLR3FQ9H1D9 316 aaPredicted RBP3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 ISCUQ9H1K1 167 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 TSPY26PQ9H489 355 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 NOCTQ9UK39 431 aaKnown RBP3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 PDE4DIPQ5VU43 2346 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 A0A1B0GVL5 298 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 EIF4E1BA6NMX2 242 aaKnown RBP3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 PP2D1A8MPX8 630 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 TXKP42681 527 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 PPFIA1Q13136 1202 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 DMP1Q13316 513 aaPredicted RBP3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 ZNF268Q14587 947 aaPredicted RBP3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 NBPF20Q3BBV1 942 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 DPCR1Q3MIW9 517 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 SPOUT1Q5T280 376 aaKnown RBP3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 SWSAP1Q6NVH7 229 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 KLHDC10Q6PID8 442 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 RTN4RL1Q86UN2 441 aaPredicted RBP3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 HOMER1Q86YM7 354 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 PSTKQ8IV42 348 aaKnown RBP3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 RAVER1Q8IY67 606 aaKnown RBP3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 HACE1Q8IYU2 909 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 CDT1Q9H211 546 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 BHMT2Q9H2M3 363 aa3.98□□□□□ -1.77
FNDC3A-202ENST00000398316 PSMA7O14818 248 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 AP5Z1O43299 807 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 CBFA2T2O43439 604 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 NBNO60934 754 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 NR3C1P04150 777 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 TMOD1P28289 359 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 PSMC2P35998 433 aaKnown RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 ME1P48163 572 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 ZNF135P52742 658 aaPredicted RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 SMTNP53814 917 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 PMS1P54277 932 aaKnown RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 CBX1P83916 185 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 VWA3BQ502W6 1294 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 MCTP1Q6DN14 999 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 NOTUMQ6P988 496 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 SFR1Q86XK3 245 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 XXYLT1Q8NBI6 393 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 SLC7A3Q8WY07 619 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 CENPIQ92674 756 aaPredicted RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 MYRFLQ96LU7 910 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 MRPL9Q9BYD2 267 aaKnown RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 UNC93B1Q9H1C4 597 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 SLC38A7Q9NVC3 462 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 RGL1Q9NZL6 768 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 MYO1AQ9UBC5 1043 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 FANCMQ8IYD8 2048 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 ARHGEF35A5YM69 484 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 TMCO5BA8MYB1 307 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 DCDC2CA8MYV0 355 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 TBC1D8O95759 1140 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 TBXAS1P24557 533 aaPredicted RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 HOXC13P31276 330 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 AIF1P55008 147 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 ACAP1Q15027 740 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 DYMQ7RTS9 669 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 GAS2L3Q86XJ1 694 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 ECHDC2Q86YB7 292 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 EHBP1Q8NDI1 1231 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 IRGQQ8WZA9 623 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 TOP1MTQ969P6 601 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 CDCA3Q99618 268 aaPredicted RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 GCOM2Q9BZD3 368 aaPredicted RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 PHACTR1Q9C0D0 580 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 AZI2Q9H6S1 392 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 DSEQ9UL01 958 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 SHROOM3Q8TF72 1996 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 COL27A1Q8IZC6 1860 aaPredicted RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 H0YHG0 523 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 ASPAP45381 313 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 SNAP25P60880 206 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 SARNPP82979 210 aaKnown RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 PNOCQ13519 176 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 NOLC1Q14978 699 aaKnown RBP eCLIP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 TMEM63BQ5T3F8 832 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 PSRC1Q6PGN9 363 aaPredicted RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 TRIM72Q6ZMU5 477 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 IRF2BP2Q7Z5L9 587 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 ZDHHC17Q8IUH5 632 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 EIF1ADQ8N9N8 165 aaKnown RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 U2AF1L4Q8WU68 220 aaKnown RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 ZNF516Q92618 1163 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 FAM131CQ96AQ9 280 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 FUBP3Q96I24 572 aaKnown RBP eCLIP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 SUSD3Q96L08 255 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 SUDS3Q9H7L9 328 aaPredicted RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 BMP2KQ9NSY1 1161 aaPredicted RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 SIX4Q9UIU6 781 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 PCDHB8Q9UN66 801 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 USP3Q9Y6I4 520 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 UQCRHLA0A096LP55 91 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms