RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 ATP2A1O14983 1001 aa25.43■■□□□ 1.66
PABPN1-202ENST00000397276 EXTL3O43909 919 aa25.43■■□□□ 1.66
PABPN1-202ENST00000397276 GLRA2P23416 452 aa25.43■■□□□ 1.66
PABPN1-202ENST00000397276 MDH1P40925 334 aaKnown RBP25.43■■□□□ 1.66
PABPN1-202ENST00000397276 TTC27Q6P3X3 843 aa25.43■■□□□ 1.66
PABPN1-202ENST00000397276 DEPTORQ8TB45 409 aa25.43■■□□□ 1.66
PABPN1-202ENST00000397276 OATP04181 439 aa25.43■■□□□ 1.66
PABPN1-202ENST00000397276 GTF2H1P32780 548 aa25.43■■□□□ 1.66
PABPN1-202ENST00000397276 KCNJ1P48048 391 aa25.43■■□□□ 1.66
PABPN1-202ENST00000397276 TDRD10Q5VZ19 366 aaKnown RBP25.43■■□□□ 1.66
PABPN1-202ENST00000397276 WNT8AQ9H1J5 351 aa25.43■■□□□ 1.66
PABPN1-202ENST00000397276 GPRC5DQ9NZD1 345 aa25.43■■□□□ 1.66
PABPN1-202ENST00000397276 PARP14Q460N5 1801 aa25.42■■□□□ 1.66
PABPN1-202ENST00000397276 HLA-DRAP01903 254 aa25.42■■□□□ 1.66
PABPN1-202ENST00000397276 PIK3CAP42336 1068 aa25.42■■□□□ 1.66
PABPN1-202ENST00000397276 SPRED3Q2MJR0 410 aa25.42■■□□□ 1.66
PABPN1-202ENST00000397276 DAB2IPQ5VWQ8 1189 aa25.42■■□□□ 1.66
PABPN1-202ENST00000397276 DUPD1Q68J44 220 aa25.42■■□□□ 1.66
PABPN1-202ENST00000397276 NLGN2Q8NFZ4 835 aa25.42■■□□□ 1.66
PABPN1-202ENST00000397276 FBXO40Q9UH90 709 aa25.42■■□□□ 1.66
PABPN1-202ENST00000397276 ANAPC7Q9UJX3 599 aa25.42■■□□□ 1.66
PABPN1-202ENST00000397276 MAP2K2P36507 400 aa25.42■■□□□ 1.66
PABPN1-202ENST00000397276 RTP1P59025 263 aa25.42■■□□□ 1.66
PABPN1-202ENST00000397276 R3HDM1Q15032 1099 aaKnown RBP25.42■■□□□ 1.66
PABPN1-202ENST00000397276 WDR44Q5JSH3 913 aa25.42■■□□□ 1.66
PABPN1-202ENST00000397276 SCARA3Q6AZY7 606 aa25.42■■□□□ 1.66
PABPN1-202ENST00000397276 CCDC137Q6PK04 289 aaKnown RBP25.42■■□□□ 1.66
PABPN1-202ENST00000397276 PASD1Q8IV76 773 aa25.42■■□□□ 1.66
PABPN1-202ENST00000397276 CD101Q93033 1021 aa25.42■■□□□ 1.66
PABPN1-202ENST00000397276 PHF2O75151 1096 aa25.41■■□□□ 1.66
PABPN1-202ENST00000397276 CLEC16AQ2KHT3 1053 aa25.41■■□□□ 1.66
PABPN1-202ENST00000397276 PSPC1Q8WXF1 523 aaKnown RBP25.41■■□□□ 1.66
PABPN1-202ENST00000397276 SLC7A3Q8WY07 619 aa25.41■■□□□ 1.66
PABPN1-202ENST00000397276 CXorf56Q9H5V9 222 aa25.41■■□□□ 1.66
PABPN1-202ENST00000397276 BTBD7Q9P203 1132 aa25.41■■□□□ 1.66
PABPN1-202ENST00000397276 MAFBQ9Y5Q3 323 aaPredicted RBP25.41■■□□□ 1.66
PABPN1-202ENST00000397276 USP2O75604 605 aaPredicted RBP25.41■■□□□ 1.66
PABPN1-202ENST00000397276 EDN1P05305 212 aa25.41■■□□□ 1.66
PABPN1-202ENST00000397276 CFHP08603 1231 aa25.41■■□□□ 1.66
PABPN1-202ENST00000397276 GCNT1Q02742 428 aa25.41■■□□□ 1.66
PABPN1-202ENST00000397276 VGLL4Q14135 290 aa25.41■■□□□ 1.66
PABPN1-202ENST00000397276 TCEAL1Q15170 157 aa25.41■■□□□ 1.66
PABPN1-202ENST00000397276 FBXO25Q8TCJ0 367 aa25.41■■□□□ 1.66
PABPN1-202ENST00000397276 STAM2O75886 525 aa25.4■■□□□ 1.66
PABPN1-202ENST00000397276 SCP2P22307 547 aa25.4■■□□□ 1.66
PABPN1-202ENST00000397276 MCCD1P59942 119 aaPredicted RBP25.4■■□□□ 1.66
PABPN1-202ENST00000397276 CRELD2Q6UXH1 353 aaPredicted RBP25.4■■□□□ 1.66
PABPN1-202ENST00000397276 NCAPG2Q86XI2 1143 aa25.4■■□□□ 1.66
PABPN1-202ENST00000397276 CCDC105Q8IYK2 499 aa25.4■■□□□ 1.66
PABPN1-202ENST00000397276 R3HDMLQ9H3Y0 253 aa25.4■■□□□ 1.66
PABPN1-202ENST00000397276 RBAKQ9NYW8 714 aaPredicted RBP25.4■■□□□ 1.66
PABPN1-202ENST00000397276 HMGB1P1B2RPK0 211 aaPredicted RBP25.4■■□□□ 1.66
PABPN1-202ENST00000397276 MTA2O94776 668 aa25.4■■□□□ 1.66
PABPN1-202ENST00000397276 TMOD1P28289 359 aa25.4■■□□□ 1.66
PABPN1-202ENST00000397276 DRP2Q13474 957 aa25.4■■□□□ 1.66
PABPN1-202ENST00000397276 ODF2Q5BJF6 829 aa25.4■■□□□ 1.66
PABPN1-202ENST00000397276 LRIG3Q6UXM1 1119 aa25.4■■□□□ 1.66
PABPN1-202ENST00000397276 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.4■■□□□ 1.662e-9■■■■□ 21.3
PABPN1-202ENST00000397276 PAGR1Q9BTK6 254 aa25.4■■□□□ 1.66
PABPN1-202ENST00000397276 PORCNQ9H237 461 aa25.4■■□□□ 1.66
PABPN1-202ENST00000397276 PCDHA3Q9Y5H8 950 aa25.4■■□□□ 1.66
PABPN1-202ENST00000397276 CLDN3O15551 220 aa25.39■■□□□ 1.66
PABPN1-202ENST00000397276 RRM1P23921 792 aa25.39■■□□□ 1.66
PABPN1-202ENST00000397276 MAPK4P31152 587 aa25.39■■□□□ 1.66
PABPN1-202ENST00000397276 C15orf39Q6ZRI6 1047 aa25.39■■□□□ 1.66
PABPN1-202ENST00000397276 CYFIP2Q96F07 1278 aa25.39■■□□□ 1.66
PABPN1-202ENST00000397276 MSTO1Q9BUK6 570 aa25.39■■□□□ 1.66
PABPN1-202ENST00000397276 UVRAGQ9P2Y5 699 aa25.39■■□□□ 1.66
PABPN1-202ENST00000397276 C4BPAP04003 597 aaKnown RBP25.39■■□□□ 1.66
PABPN1-202ENST00000397276 UBA1P22314 1058 aaKnown RBP25.39■■□□□ 1.66
PABPN1-202ENST00000397276 PTGIRP43119 386 aa25.39■■□□□ 1.66
PABPN1-202ENST00000397276 ALDH5A1P51649 535 aaPredicted RBP25.39■■□□□ 1.66
PABPN1-202ENST00000397276 DHX34Q14147 1143 aaKnown RBP25.39■■□□□ 1.66
PABPN1-202ENST00000397276 PPP2R5EQ16537 467 aa25.39■■□□□ 1.66
PABPN1-202ENST00000397276 ZACNQ401N2 412 aa25.39■■□□□ 1.66
PABPN1-202ENST00000397276 SLC13A5Q86YT5 568 aaPredicted RBP25.39■■□□□ 1.66
PABPN1-202ENST00000397276 CCDC13Q8IYE1 715 aa25.39■■□□□ 1.66
PABPN1-202ENST00000397276 DHX33Q9H6R0 707 aaKnown RBP25.39■■□□□ 1.66
PABPN1-202ENST00000397276 SSC5DA1L4H1 1573 aa25.39■■□□□ 1.65
PABPN1-202ENST00000397276 TTLL13PA6NNM8 815 aa25.39■■□□□ 1.65
PABPN1-202ENST00000397276 KIAA0391O15091 583 aaKnown RBP25.39■■□□□ 1.65
PABPN1-202ENST00000397276 VNN1O95497 513 aa25.39■■□□□ 1.65
PABPN1-202ENST00000397276 RARAP10276 462 aa25.39■■□□□ 1.65
PABPN1-202ENST00000397276 CHRNA3P32297 505 aa25.39■■□□□ 1.65
PABPN1-202ENST00000397276 RWDD2BP57060 319 aa25.39■■□□□ 1.65
PABPN1-202ENST00000397276 IFFO1Q0D2I5 559 aa25.39■■□□□ 1.65
PABPN1-202ENST00000397276 MTMR3Q13615 1198 aa25.39■■□□□ 1.65
PABPN1-202ENST00000397276 PSMD6Q15008 389 aa25.39■■□□□ 1.65
PABPN1-202ENST00000397276 ZDHHC18Q9NUE0 388 aa25.39■■□□□ 1.65
PABPN1-202ENST00000397276 CTNNA2P26232 953 aa25.38■■□□□ 1.65
PABPN1-202ENST00000397276 MARK3P27448 753 aa25.38■■□□□ 1.65
PABPN1-202ENST00000397276 QPCTQ16769 361 aa25.38■■□□□ 1.65
PABPN1-202ENST00000397276 KRT71Q3SY84 523 aa25.38■■□□□ 1.65
PABPN1-202ENST00000397276 RASAL2Q9UJF2 1139 aa25.38■■□□□ 1.65
PABPN1-202ENST00000397276 NOVA2Q9UNW9 492 aaKnown RBP25.38■■□□□ 1.65
PABPN1-202ENST00000397276 WDR81Q562E7 1941 aa25.38■■□□□ 1.65
PABPN1-202ENST00000397276 A6NNZ2 444 aa25.38■■□□□ 1.65
PABPN1-202ENST00000397276 DCDC2CA8MYV0 355 aa25.38■■□□□ 1.65
PABPN1-202ENST00000397276 H0YCG3 227 aa25.38■■□□□ 1.65
PABPN1-202ENST00000397276 RPL21P46778 160 aaKnown RBP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms