RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 SNX3O60493 162 aa19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 ATP6V1G2O95670 118 aa19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 SGO2Q562F6 1265 aa19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 FAM133BQ5BKY9 247 aaKnown RBP19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 RPAINQ86UA6 219 aa19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 CCDC63Q8NA47 563 aa19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 IL31RAQ8NI17 732 aa19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 DDX1Q92499 740 aaKnown RBP19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 ST6GALNAC4Q9H4F1 302 aa19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 GPRC5CQ9NQ84 441 aa19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 HOMER3Q9NSC5 361 aa19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 COL20A1Q9P218 1284 aa19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 TULP1O00294 542 aaPredicted RBP19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 MCCD1P59942 119 aaPredicted RBP19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 SPP2Q13103 211 aa19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 DGKZQ13574 1117 aa19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 VSTM1Q6UX27 236 aa19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 MGARPQ8TDB4 240 aa19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 ARHGEF2Q92974 986 aaKnown RBP19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 ELMO3Q96BJ8 720 aa19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 SERPINB12Q96P63 405 aa19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 TACO1Q9BSH4 297 aaKnown RBP19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 CHST7Q9NS84 486 aa19.6■□□□□ 0.73
PCDHA1-202ENST00000394633 ASNSP08243 561 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 PDE6CP51160 858 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 HSD17B4P51659 736 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 PEX3P56589 373 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 E2F5Q15329 346 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 SNRNP35Q16560 246 aaKnown RBP19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 ACAD10Q6JQN1 1059 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 CCDC127Q96BQ5 260 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 SAAL1Q96ER3 474 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 ADARB2Q9NS39 739 aaKnown RBP19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 AGAP1Q9UPQ3 857 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 TMEM120BA0PK00 339 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 GRIN3BO60391 1043 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 IBSPP21815 317 aaPredicted RBP19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 IVDP26440 423 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 ADSSP30520 456 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 QARSP47897 775 aaKnown RBP19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 NCKAP1LP55160 1127 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 KRT39Q6A163 491 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 DYDC1Q8WWB3 177 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 DHX38Q92620 1227 aaKnown RBP19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 HERPUD2Q9BSE4 406 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 NOD2Q9HC29 1040 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 CTNNAL1Q9UBT7 734 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 ASIC3Q9UHC3 531 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 COQ4Q9Y3A0 265 aa19.59■□□□□ 0.73
PCDHA1-202ENST00000394633 TCP11X1B4DZS4 312 aa19.58■□□□□ 0.73
PCDHA1-202ENST00000394633 UBOX5O94941 541 aa19.58■□□□□ 0.73
PCDHA1-202ENST00000394633 ITIH2P19823 946 aa19.58■□□□□ 0.73
PCDHA1-202ENST00000394633 GPC3P51654 580 aa19.58■□□□□ 0.73
PCDHA1-202ENST00000394633 SNRPFP62306 86 aaKnown RBP19.58■□□□□ 0.73
PCDHA1-202ENST00000394633 PARD3BQ8TEW8 1205 aa19.58■□□□□ 0.73
PCDHA1-202ENST00000394633 ATG4AQ8WYN0 398 aa19.58■□□□□ 0.73
PCDHA1-202ENST00000394633 TOPORSQ9NS56 1045 aaPredicted RBP19.58■□□□□ 0.73
PCDHA1-202ENST00000394633 FGFR1OP2Q9NVK5 253 aa19.58■□□□□ 0.73
PCDHA1-202ENST00000394633 FOXO6A8MYZ6 492 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 PLA2G6O60733 806 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 CALCAP01258 141 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 SLC8A1P32418 973 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 UGCGQ16739 394 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 FAM160B2Q86V87 743 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 GIMAP7Q8NHV1 300 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 TAS1R2Q8TE23 839 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 SNF8Q96H20 258 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 AGBL1Q96MI9 1066 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 ZNF341Q9BYN7 854 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 AGO4Q9HCK5 861 aaKnown RBP19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 DNAJC17Q9NVM6 304 aaKnown RBP19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 GGT7Q9UJ14 662 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 ANAPC7Q9UJX3 599 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 USP15Q9Y4E8 981 aaPredicted RBP19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 WDR81Q562E7 1941 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 ADM5C9JUS6 153 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 YWHABP31946 246 aaKnown RBP19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 PTK6Q13882 451 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 CLEC16AQ2KHT3 1053 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 TKFCQ3LXA3 575 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 TBC1D1Q86TI0 1168 aaPredicted RBP19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 TCP11Q8WWU5 503 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 NT5C1BQ96P26 610 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 PLVAPQ9BX97 442 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 TRIM7Q9C029 511 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 TMEM8AQ9HCN3 771 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 BAIAP2L1Q9UHR4 511 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 DOCK1Q14185 1865 aa19.57■□□□□ 0.72
PCDHA1-202ENST00000394633 CFAP73A6NFT4 308 aa19.56■□□□□ 0.72
PCDHA1-202ENST00000394633 LYPLA2O95372 231 aa19.56■□□□□ 0.72
PCDHA1-202ENST00000394633 TTC4O95801 387 aa19.56■□□□□ 0.72
PCDHA1-202ENST00000394633 MAPK4P31152 587 aa19.56■□□□□ 0.72
PCDHA1-202ENST00000394633 ITGA8P53708 1063 aa19.56■□□□□ 0.72
PCDHA1-202ENST00000394633 PDE4CQ08493 712 aa19.56■□□□□ 0.72
PCDHA1-202ENST00000394633 PRKG1Q13976 671 aa19.56■□□□□ 0.72
PCDHA1-202ENST00000394633 TRIP13Q15645 432 aaPredicted RBP19.56■□□□□ 0.72
PCDHA1-202ENST00000394633 WRNIP1Q96S55 665 aa19.56■□□□□ 0.72
PCDHA1-202ENST00000394633 EZRP15311 586 aaKnown RBP19.56■□□□□ 0.72
PCDHA1-202ENST00000394633 NCALDP61601 193 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms