RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 CYTH1Q15438 398 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 HIF1AQ16665 826 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 INTS5Q6P9B9 1019 aaKnown RBP5.28□□□□□ -1.56
LTN1-202ENST00000389194 IKZF4Q9H2S9 585 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 NOP53Q9NZM5 478 aaKnown RBP5.28□□□□□ -1.56
LTN1-202ENST00000389194 ARHGAP20Q9P2F6 1191 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 FEM1BQ9UK73 627 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 NCAPD2Q15021 1401 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 MSH4O15457 936 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 KRT37O76014 449 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 KRT3P12035 628 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 OSBPP22059 807 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 GTF2H1P32780 548 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 RAP1GAPP47736 663 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 PPATQ06203 517 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 NCOA4Q13772 614 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 GLE1Q53GS7 698 aaKnown RBP5.28□□□□□ -1.56
LTN1-202ENST00000389194 FAM182AQ5T1J6 154 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 MROH9Q5TGP6 573 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 AP1ARQ63HQ0 302 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 HEATR6Q6AI08 1181 aaKnown RBP5.28□□□□□ -1.56
LTN1-202ENST00000389194 LRRC31Q6UY01 552 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 FRMD5Q7Z6J6 570 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 RHOT1Q8IXI2 618 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 MICALL2Q8IY33 904 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 FAM71DQ8N9W8 422 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 KCNH7Q9NS40 1196 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 PIM2Q9P1W9 311 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 LCMT1Q9UIC8 334 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 KCNG1Q9UIX4 513 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 BAG5Q9UL15 447 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 SCINQ9Y6U3 715 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 ADGRB3O60242 1522 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 NEXMIFQ5QGS0 1516 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 USP31Q70CQ4 1352 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 CAND2O75155 1236 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 SUPT3HO75486 399 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 CHRNA3P32297 505 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 HADHAP40939 763 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 JAK3P52333 1124 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 PHEXP78562 749 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 ROR1Q01973 937 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 RSBN1LQ6PCB5 846 aaPredicted RBP5.28□□□□□ -1.56
LTN1-202ENST00000389194 C3orf62Q6ZUJ4 267 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 SLC47A2Q86VL8 602 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 ATP11CQ8NB49 1132 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 MCPH1Q8NEM0 835 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 ATG4CQ96DT6 458 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 MTMR8Q96EF0 704 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 CDHR1Q96JP9 859 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 FAM81BQ96LP2 452 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 CCDC138Q96M89 665 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 EPN3Q9H201 632 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 GPATCH2LQ9NWQ4 482 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 APOBEC2Q9Y235 224 aaKnown RBP5.28□□□□□ -1.56
LTN1-202ENST00000389194 TNS3Q68CZ2 1445 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 PXDNQ92626 1479 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 OVOS2A0A0J9YW53 1432 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 MIF4GDA9UHW6 222 aaKnown RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 MEFVO15553 781 aaPredicted RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 HSPA6P17066 643 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 CUL3Q13618 768 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 KLHDC7AQ5VTJ3 777 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 OVOS2Q6IE36 1432 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 C16orf86Q6ZW13 317 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 FBXO33Q7Z6M2 555 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 PRUNE1Q86TP1 453 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 TTC30AQ86WT1 665 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 CCDC90BQ9GZT6 254 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 UNC45AQ9H3U1 944 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 ACTR5Q9H9F9 607 aaPredicted RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 NEU2Q9Y3R4 380 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 SDK1Q7Z5N4 2213 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 SALL3Q9BXA9 1300 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 ARHGAP31Q2M1Z3 1444 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 CHUKO15111 745 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 GSTA4O15217 222 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 RTN2O75298 545 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 TXNP10599 105 aaKnown RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 PDGFRAP16234 1089 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 CYP11B2P19099 503 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 PON1P27169 355 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 STAT5BP51692 787 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 USP11P51784 963 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 DCAF4L1Q3SXM0 396 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 SLFN12LQ6IEE8 588 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 PTF1AQ7RTS3 328 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 RASSF3Q86WH2 238 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 ZFPM1Q8IX07 1006 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 GALNT4Q8N4A0 578 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 RBBP8NLQ8NC74 664 aaPredicted RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 TMA16Q96EY4 203 aaKnown RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 ACAP3Q96P50 834 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 PURBQ96QR8 312 aaKnown RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 APOL2Q9BQE5 337 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 THTPAQ9BU02 230 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 STK33Q9BYT3 514 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 EDEM3Q9BZQ6 932 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 PTPRHQ9HD43 1115 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 IL17RBQ9NRM6 502 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms