RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CREB3O43889 395 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 TYK2P29597 1187 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 CASP2P42575 452 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 ACTR2P61160 394 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 ST13P4Q8IZP2 240 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 TMEM143Q96AN5 459 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 C9orf72Q96LT7 481 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 MOV10L1Q9BXT6 1211 aaKnown RBP18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 TMEM117Q9H0C3 514 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 WWP1Q9H0M0 922 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 ECT2Q9H8V3 914 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 SUN2Q9UH99 717 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 TCRBV5S4A2TA0A5A2 114 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 SMAPO00193 183 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 CHN1P15882 459 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 RFC5P40937 340 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 NOP14P78316 857 aaKnown RBP18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 TSPY1Q01534 308 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 NWD1Q149M9 1564 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 ZNF280CQ8ND82 737 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 TPCN2Q8NHX9 752 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 HLA-DRAP01903 254 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 P3H1Q32P28 736 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 C1orf146Q5VVC0 180 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 TRIM65Q6PJ69 517 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 OTUD5Q96G74 571 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 ACAP3Q96P50 834 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 PNKPQ96T60 521 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 FNDC3AQ9Y2H6 1198 aaKnown RBP18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 APOL1O14791 398 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 MRPL40Q9NQ50 206 aaKnown RBP18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 USP15Q9Y4E8 981 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 ORC6Q9Y5N6 252 aa18.05■□□□□ 0.48
TRAPPC11-201ENST00000334690 PPLO60437 1756 aa18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 CFAP69A5D8W1 941 aa18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 TXNP10599 105 aaKnown RBP18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 RBP5P82980 135 aa18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 NT5DC1Q5TFE4 455 aa18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 SLC13A1Q9BZW2 595 aa18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 LACRTQ9GZZ8 138 aa18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 TFR2Q9UP52 801 aa18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 TRPA1O75762 1119 aa18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 PDGFRAP16234 1089 aa18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 EMC2Q15006 297 aa18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 FASTKD5Q7L8L6 764 aaKnown RBP18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 ZC3H15Q8WU90 426 aaKnown RBP18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 NEU2Q9Y3R4 380 aa18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 SARSP49591 514 aaKnown RBP18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 PRKCEQ02156 737 aa18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 DDX42Q86XP3 938 aaKnown RBP eCLIP18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 HIPK4Q8NE63 616 aa18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 PRPF31Q8WWY3 499 aaKnown RBP18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 TRIM62Q9BVG3 475 aa18.04■□□□□ 0.48
TRAPPC11-201ENST00000334690 C1orf228Q6PIY5 440 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 CAPN6Q9Y6Q1 641 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 DEPDC5O75140 1603 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 FAM47DPA6NHR8 397 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 PPP1R12AO14974 1030 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 MGEA5O60502 916 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 FAM107AO95990 144 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 ACTN3Q08043 901 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 PLA2G4FQ68DD2 849 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 TEX2Q8IWB9 1127 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 RIOX1Q9H6W3 641 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 ZFATQ9P243 1243 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 TTC36A6NLP5 189 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 MYL3P08590 195 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 SREBF1P36956 1147 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 PLA2G4AP47712 749 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 FNTAP49354 379 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 OR2W6PQ8NHA6 318 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 PRMT1Q99873 361 aaKnown RBP18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 SMARCAD1Q9H4L7 1026 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 AGAP1Q9UPQ3 857 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 SALL1Q9NSC2 1324 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 ZBTB24O43167 697 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 PON1P27169 355 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 CDC42EP1Q00587 391 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 CENPCQ03188 943 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 SLC12A1Q13621 1099 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 PID1Q7Z2X4 250 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 CCDC138Q96M89 665 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 SEMA6BQ9H3T3 888 aa18.03■□□□□ 0.48
TRAPPC11-201ENST00000334690 TMEM131LA2VDJ0 1609 aa18.02■□□□□ 0.48
TRAPPC11-201ENST00000334690 F8W8V4 182 aa18.02■□□□□ 0.48
TRAPPC11-201ENST00000334690 DIAPH2O60879 1101 aa18.02■□□□□ 0.48
TRAPPC11-201ENST00000334690 MORF4L2Q15014 288 aa18.02■□□□□ 0.48
TRAPPC11-201ENST00000334690 TTC8Q8TAM2 541 aa18.02■□□□□ 0.48
TRAPPC11-201ENST00000334690 GOLPH3Q9H4A6 298 aa18.02■□□□□ 0.48
TRAPPC11-201ENST00000334690 PSMC3IPQ9P2W1 217 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC11-201ENST00000334690 AK9Q5TCS8 1911 aa18.02■□□□□ 0.48
TRAPPC11-201ENST00000334690 MED24O75448 989 aa18.02■□□□□ 0.48
TRAPPC11-201ENST00000334690 SPAG6O75602 509 aa18.02■□□□□ 0.48
TRAPPC11-201ENST00000334690 NPEPPSP55786 919 aa18.02■□□□□ 0.48
TRAPPC11-201ENST00000334690 AP1B1Q10567 949 aa18.02■□□□□ 0.48
TRAPPC11-201ENST00000334690 BIRC2Q13490 618 aa18.02■□□□□ 0.48
TRAPPC11-201ENST00000334690 PDE1CQ14123 709 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC11-201ENST00000334690 RIBC1Q8N443 379 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC11-201ENST00000334690 CCNYL1Q8N7R7 359 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms