RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 NOMO2Q5JPE7 1267 aa20.26■□□□□ 0.83
TSSC4-201ENST00000333256 RASIP1Q5U651 963 aa20.26■□□□□ 0.83
TSSC4-201ENST00000333256 TRIM59Q8IWR1 403 aa20.26■□□□□ 0.83
TSSC4-201ENST00000333256 OR5B17Q8NGF7 314 aa20.26■□□□□ 0.83
TSSC4-201ENST00000333256 C18orf25Q96B23 403 aaPredicted RBP20.26■□□□□ 0.83
TSSC4-201ENST00000333256 CASD1Q96PB1 797 aa20.26■□□□□ 0.83
TSSC4-201ENST00000333256 ASB7Q9H672 318 aa20.26■□□□□ 0.83
TSSC4-201ENST00000333256 TAB2Q9NYJ8 693 aa20.26■□□□□ 0.83
TSSC4-201ENST00000333256 POU5F1Q01860 360 aaKnown RBP20.25■□□□□ 0.83
TSSC4-201ENST00000333256 TMEM132DQ14C87 1099 aa20.25■□□□□ 0.83
TSSC4-201ENST00000333256 FAM109BQ6ICB4 259 aaPredicted RBP20.25■□□□□ 0.83
TSSC4-201ENST00000333256 TMC2Q8TDI7 906 aa20.25■□□□□ 0.83
TSSC4-201ENST00000333256 ZNF516Q92618 1163 aa20.25■□□□□ 0.83
TSSC4-201ENST00000333256 SLC35C1Q96A29 364 aa20.25■□□□□ 0.83
TSSC4-201ENST00000333256 CGRRF1Q99675 332 aa20.25■□□□□ 0.83
TSSC4-201ENST00000333256 ZBED2Q9BTP6 218 aa20.25■□□□□ 0.83
TSSC4-201ENST00000333256 MTMR12Q9C0I1 747 aa20.25■□□□□ 0.83
TSSC4-201ENST00000333256 GOLGA2P5Q9HBQ8 144 aa20.25■□□□□ 0.83
TSSC4-201ENST00000333256 CACNG4Q9UBN1 327 aa20.25■□□□□ 0.83
TSSC4-201ENST00000333256 TUBGCP4Q9UGJ1 667 aa20.25■□□□□ 0.83
TSSC4-201ENST00000333256 HOXA2O43364 376 aa20.24■□□□□ 0.83
TSSC4-201ENST00000333256 PRKCSHP14314 528 aaPredicted RBP20.24■□□□□ 0.83
TSSC4-201ENST00000333256 KCNE1P15382 129 aa20.24■□□□□ 0.83
TSSC4-201ENST00000333256 EEF1GP26641 437 aaKnown RBP20.24■□□□□ 0.83
TSSC4-201ENST00000333256 GCLMP48507 274 aa20.24■□□□□ 0.83
TSSC4-201ENST00000333256 TPM4P67936 248 aa20.24■□□□□ 0.83
TSSC4-201ENST00000333256 SOX4Q06945 474 aaPredicted RBP20.24■□□□□ 0.83
TSSC4-201ENST00000333256 PPP3CAQ08209 521 aa20.24■□□□□ 0.83
TSSC4-201ENST00000333256 KRT31Q15323 416 aa20.24■□□□□ 0.83
TSSC4-201ENST00000333256 SCARA3Q6AZY7 606 aa20.24■□□□□ 0.83
TSSC4-201ENST00000333256 HERC6Q8IVU3 1022 aa20.24■□□□□ 0.83
TSSC4-201ENST00000333256 CD302Q8IX05 232 aa20.24■□□□□ 0.83
TSSC4-201ENST00000333256 YME1L1Q96TA2 773 aa20.24■□□□□ 0.83
TSSC4-201ENST00000333256 TUBGCP2Q9BSJ2 902 aa20.24■□□□□ 0.83
TSSC4-201ENST00000333256 TMEM117Q9H0C3 514 aa20.24■□□□□ 0.83
TSSC4-201ENST00000333256 TBC1D13Q9NVG8 400 aa20.24■□□□□ 0.83
TSSC4-201ENST00000333256 RNF216Q9NWF9 866 aaPredicted RBP20.24■□□□□ 0.83
TSSC4-201ENST00000333256 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.24■□□□□ 0.83
TSSC4-201ENST00000333256 LAMA3Q16787 3333 aa20.24■□□□□ 0.83
TSSC4-201ENST00000333256 GRXCR1A8MXD5 290 aa20.23■□□□□ 0.83
TSSC4-201ENST00000333256 B4GALT3O60512 393 aa20.23■□□□□ 0.83
TSSC4-201ENST00000333256 GJB5O95377 273 aa20.23■□□□□ 0.83
TSSC4-201ENST00000333256 THP07101 528 aa20.23■□□□□ 0.83
TSSC4-201ENST00000333256 SURF1Q15526 300 aa20.23■□□□□ 0.83
TSSC4-201ENST00000333256 ZNF280BQ86YH2 543 aa20.23■□□□□ 0.83
TSSC4-201ENST00000333256 WDR49Q8IV35 697 aa20.23■□□□□ 0.83
TSSC4-201ENST00000333256 URGCPQ8TCY9 931 aa20.23■□□□□ 0.83
TSSC4-201ENST00000333256 PPP1R10Q96QC0 940 aaKnown RBP20.23■□□□□ 0.83
TSSC4-201ENST00000333256 SLC9A7Q96T83 725 aa20.23■□□□□ 0.83
TSSC4-201ENST00000333256 INTS13Q9NVM9 706 aa20.23■□□□□ 0.83
TSSC4-201ENST00000333256 PTPRSQ13332 1948 aa20.23■□□□□ 0.83
TSSC4-201ENST00000333256 CITO14578 2027 aa20.23■□□□□ 0.83
TSSC4-201ENST00000333256 PES1O00541 588 aaKnown RBP20.22■□□□□ 0.83
TSSC4-201ENST00000333256 TMEM191BP0C7N4 346 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 RABGGTBP53611 331 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 RNASELQ05823 741 aaKnown RBP20.22■□□□□ 0.83
TSSC4-201ENST00000333256 NAB2Q15742 525 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 CHRDL2Q6WN34 429 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 USP37Q86T82 979 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 RABGGTAQ92696 567 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 ZNF689Q96CS4 500 aaPredicted RBP20.22■□□□□ 0.83
TSSC4-201ENST00000333256 VPS16Q9H269 839 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 RC3H2Q9HBD1 1191 aaKnown RBP20.22■□□□□ 0.83
TSSC4-201ENST00000333256 C2CD2Q9Y426 696 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 INPPL1O15357 1258 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 DDHD2O94830 711 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 CLDN10P78369 228 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 KCNH2Q12809 1159 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 GRIK3Q13003 919 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 ZBTB6Q15916 424 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 CBWD6Q4V339 395 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 CBWD3Q5JTY5 395 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 MIIPQ5JXC2 388 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 CBWD5Q5RIA9 395 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 COL4A6Q14031 1691 aa20.22■□□□□ 0.83
TSSC4-201ENST00000333256 CASTOR2A6NHX0 329 aa20.21■□□□□ 0.83
TSSC4-201ENST00000333256 MAN2A1Q16706 1144 aa20.21■□□□□ 0.83
TSSC4-201ENST00000333256 DUOXA2Q1HG44 320 aa20.21■□□□□ 0.83
TSSC4-201ENST00000333256 APTXQ7Z2E3 356 aaKnown RBP20.21■□□□□ 0.83
TSSC4-201ENST00000333256 PHOSPHO2Q8TCD6 241 aa20.21■□□□□ 0.83
TSSC4-201ENST00000333256 PAAF1Q9BRP4 392 aa20.21■□□□□ 0.83
TSSC4-201ENST00000333256 DNAJB4Q9UDY4 337 aa20.21■□□□□ 0.83
TSSC4-201ENST00000333256 LIMA1Q9UHB6 759 aaKnown RBP20.21■□□□□ 0.83
TSSC4-201ENST00000333256 UBQLN1Q9UMX0 589 aaKnown RBP20.21■□□□□ 0.83
TSSC4-201ENST00000333256 DERAQ9Y315 318 aa20.21■□□□□ 0.83
TSSC4-201ENST00000333256 ANK1P16157 1881 aa20.21■□□□□ 0.83
TSSC4-201ENST00000333256 TRIP11Q15643 1979 aa20.21■□□□□ 0.83
TSSC4-201ENST00000333256 TLL1O43897 1013 aa20.2■□□□□ 0.82
TSSC4-201ENST00000333256 TNNC2P02585 160 aa20.2■□□□□ 0.82
TSSC4-201ENST00000333256 COPB1P53618 953 aaKnown RBP20.2■□□□□ 0.82
TSSC4-201ENST00000333256 PLCB2Q00722 1185 aa20.2■□□□□ 0.82
TSSC4-201ENST00000333256 BIRC3Q13489 604 aa20.2■□□□□ 0.82
TSSC4-201ENST00000333256 BTG3Q14201 252 aaPredicted RBP20.2■□□□□ 0.82
TSSC4-201ENST00000333256 TDRD10Q5VZ19 366 aaKnown RBP20.2■□□□□ 0.82
TSSC4-201ENST00000333256 SV2AQ7L0J3 742 aa20.2■□□□□ 0.82
TSSC4-201ENST00000333256 C1orf127Q8N9H9 656 aa20.2■□□□□ 0.82
TSSC4-201ENST00000333256 ANKRD20A12PQ8NF67 263 aa20.2■□□□□ 0.82
TSSC4-201ENST00000333256 ANKRD36BP1Q96IX9 119 aa20.2■□□□□ 0.82
TSSC4-201ENST00000333256 DPP3Q9NY33 737 aa20.2■□□□□ 0.82
TSSC4-201ENST00000333256 KANSL3Q9P2N6 904 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms