RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 SNX29Q8TEQ0 813 aa19.19■□□□□ 0.66
EXOSC4-201ENST00000316052 FGF14Q92915 247 aa19.19■□□□□ 0.66
EXOSC4-201ENST00000316052 ACO2Q99798 780 aaKnown RBP19.19■□□□□ 0.66
EXOSC4-201ENST00000316052 PTPRHQ9HD43 1115 aa19.19■□□□□ 0.66
EXOSC4-201ENST00000316052 SH2B1Q9NRF2 756 aaPredicted RBP19.19■□□□□ 0.66
EXOSC4-201ENST00000316052 CDH7Q9ULB5 785 aa19.19■□□□□ 0.66
EXOSC4-201ENST00000316052 I3L4J1 428 aa19.18■□□□□ 0.66
EXOSC4-201ENST00000316052 TKTP29401 623 aaKnown RBP19.18■□□□□ 0.66
EXOSC4-201ENST00000316052 HOXA9P31269 272 aa19.18■□□□□ 0.66
EXOSC4-201ENST00000316052 PDXDC1Q6P996 788 aa19.18■□□□□ 0.66
EXOSC4-201ENST00000316052 KCNK18Q7Z418 384 aa19.18■□□□□ 0.66
EXOSC4-201ENST00000316052 ITFG1Q8TB96 612 aa19.18■□□□□ 0.66
EXOSC4-201ENST00000316052 SLC7A14Q8TBB6 771 aa19.18■□□□□ 0.66
EXOSC4-201ENST00000316052 FGF13Q92913 245 aa19.18■□□□□ 0.66
EXOSC4-201ENST00000316052 NKD2Q969F2 451 aaPredicted RBP19.18■□□□□ 0.66
EXOSC4-201ENST00000316052 MMTAG2Q9BU76 263 aaKnown RBP19.18■□□□□ 0.66
EXOSC4-201ENST00000316052 RUSC1Q9BVN2 902 aa19.18■□□□□ 0.66
EXOSC4-201ENST00000316052 CDT1Q9H211 546 aa19.18■□□□□ 0.66
EXOSC4-201ENST00000316052 SLC2A4RGQ9NR83 387 aa19.18■□□□□ 0.66
EXOSC4-201ENST00000316052 MTRRQ9UBK8 725 aa19.18■□□□□ 0.66
EXOSC4-201ENST00000316052 POLIQ9UNA4 740 aa19.18■□□□□ 0.66
EXOSC4-201ENST00000316052 DNM3Q9UQ16 869 aa19.18■□□□□ 0.66
EXOSC4-201ENST00000316052 ZFP37Q9Y6Q3 630 aaPredicted RBP19.18■□□□□ 0.66
EXOSC4-201ENST00000316052 CITO14578 2027 aa19.17■□□□□ 0.66
EXOSC4-201ENST00000316052 HIP1RO75146 1068 aa19.17■□□□□ 0.66
EXOSC4-201ENST00000316052 GRM5P41594 1212 aa19.17■□□□□ 0.66
EXOSC4-201ENST00000316052 BRCC3P46736 316 aa19.17■□□□□ 0.66
EXOSC4-201ENST00000316052 OSTNP61366 133 aa19.17■□□□□ 0.66
EXOSC4-201ENST00000316052 GPC5P78333 572 aa19.17■□□□□ 0.66
EXOSC4-201ENST00000316052 XKR4Q5GH76 650 aa19.17■□□□□ 0.66
EXOSC4-201ENST00000316052 ZMAT2Q96NC0 199 aaKnown RBP19.17■□□□□ 0.66
EXOSC4-201ENST00000316052 TARS2Q9BW92 718 aaKnown RBP19.17■□□□□ 0.66
EXOSC4-201ENST00000316052 TMEM134Q9H6X4 195 aa19.17■□□□□ 0.66
EXOSC4-201ENST00000316052 ARHGEF3Q9NR81 526 aa19.17■□□□□ 0.66
EXOSC4-201ENST00000316052 HCFC1R1Q9NWW0 138 aa19.17■□□□□ 0.66
EXOSC4-201ENST00000316052 ARHGAP28Q9P2N2 729 aa19.17■□□□□ 0.66
EXOSC4-201ENST00000316052 CDY1Q9Y6F8 540 aa19.17■□□□□ 0.66
EXOSC4-201ENST00000316052 XYLBO75191 536 aa19.16■□□□□ 0.66
EXOSC4-201ENST00000316052 DCNP07585 359 aaKnown RBP19.16■□□□□ 0.66
EXOSC4-201ENST00000316052 MAPK7Q13164 816 aa19.16■□□□□ 0.66
EXOSC4-201ENST00000316052 UVSSAQ2YD98 709 aa19.16■□□□□ 0.66
EXOSC4-201ENST00000316052 PHLDB3Q6NSJ2 640 aa19.16■□□□□ 0.66
EXOSC4-201ENST00000316052 RINT1Q6NUQ1 792 aa19.16■□□□□ 0.66
EXOSC4-201ENST00000316052 C1orf186Q6ZWK4 172 aa19.16■□□□□ 0.66
EXOSC4-201ENST00000316052 DDX27Q96GQ7 796 aaKnown RBP19.16■□□□□ 0.66
EXOSC4-201ENST00000316052 UROC1Q96N76 676 aa19.16■□□□□ 0.66
EXOSC4-201ENST00000316052 DLGAP2Q9P1A6 1054 aa19.16■□□□□ 0.66
EXOSC4-201ENST00000316052 DNMT3BQ9UBC3 853 aaKnown RBP19.16■□□□□ 0.66
EXOSC4-201ENST00000316052 DAXXQ9UER7 740 aaPredicted RBP19.16■□□□□ 0.66
EXOSC4-201ENST00000316052 BACE2Q9Y5Z0 518 aa19.16■□□□□ 0.66
EXOSC4-201ENST00000316052 SFI1A8K8P3 1242 aa19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 ABLIM1O14639 778 aa19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 MEFVO15553 781 aaPredicted RBP19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 POU2F2P09086 479 aa19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 RFX1P22670 979 aa19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 PROZP22891 400 aa19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 ZNF568Q3ZCX4 644 aa19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 SPECC1Q5M775 1068 aa19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 KRT79Q5XKE5 535 aa19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 APBB1IPQ7Z5R6 666 aaPredicted RBP19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 ZBTB45Q96K62 511 aaPredicted RBP19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 CCDC94Q9BW85 323 aaPredicted RBP19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 MRPL4Q9BYD3 311 aaKnown RBP19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 RAB34Q9BZG1 259 aa19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 KMT5AQ9NQR1 393 aa19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 SIT1Q9Y3P8 196 aa19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 STK24Q9Y6E0 443 aa19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 PHLPP2Q6ZVD8 1323 aa19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 MYH11P35749 1972 aa19.15■□□□□ 0.66
EXOSC4-201ENST00000316052 TRAPPC3O43617 180 aa19.14■□□□□ 0.65
EXOSC4-201ENST00000316052 YARSP54577 528 aaKnown RBP19.14■□□□□ 0.65
EXOSC4-201ENST00000316052 DMP1Q13316 513 aaPredicted RBP19.14■□□□□ 0.65
EXOSC4-201ENST00000316052 POTEHQ6S545 545 aa19.14■□□□□ 0.65
EXOSC4-201ENST00000316052 ANKS3Q6ZW76 656 aa19.14■□□□□ 0.65
EXOSC4-201ENST00000316052 FOXQ1Q9C009 403 aa19.14■□□□□ 0.65
EXOSC4-201ENST00000316052 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.14■□□□□ 0.65
EXOSC4-201ENST00000316052 OTOGLQ3ZCN5 2332 aa19.14■□□□□ 0.65
EXOSC4-201ENST00000316052 COL4A3Q01955 1670 aa19.14■□□□□ 0.65
EXOSC4-201ENST00000316052 F5P12259 2224 aa19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 GPR179Q6PRD1 2367 aa19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 LAD1O00515 517 aa19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 SLC16A4O15374 487 aa19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 LRRN2O75325 713 aa19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 GLULP15104 373 aa19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 KCNE1P15382 129 aa19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 PRPHP41219 470 aa19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 STARD6P59095 220 aa19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 PABPC1LQ4VXU2 614 aaKnown RBP19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 DTHD1Q6ZMT9 781 aa19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 NPAS3Q8IXF0 933 aa19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 ADSSL1Q8N142 457 aa19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 C18orf25Q96B23 403 aaPredicted RBP19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 SNX27Q96L92 541 aa19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 ACAP3Q96P50 834 aa19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 NTPCRQ9BSD7 190 aaKnown RBP19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 TCHPQ9BT92 498 aa19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 TOPORSQ9NS56 1045 aaPredicted RBP19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 RBM19Q9Y4C8 960 aaKnown RBP19.13■□□□□ 0.65
EXOSC4-201ENST00000316052 PODXLO00592 558 aa19.12■□□□□ 0.65
EXOSC4-201ENST00000316052 TBC1D4O60343 1298 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms