RNA–Protein interactions for RNA: YOR205C

GEP3, Transcript of Protein required for mitochondrial ribosome small subunit biogenesis, yeast

Gene GEP3, Length 1,671 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEP3	YOR205C	HEM4	P06174	275 aa		4.7	□□□□□ -1.66
GEP3	YOR205C	CHO1	P08456	276 aa		4.7	□□□□□ -1.66
GEP3	YOR205C	RPL30	P14120	105 aa	Known RBP	4.7	□□□□□ -1.66
GEP3	YOR205C	URA6	P15700	204 aa		4.7	□□□□□ -1.66
GEP3	YOR205C	SAR1	P20606	190 aa	Known RBP	4.7	□□□□□ -1.66
GEP3	YOR205C	PCL1	P24867	279 aa		4.7	□□□□□ -1.66
GEP3	YOR205C	RNA14	P25298	677 aa	Known RBP	4.7	□□□□□ -1.66
GEP3	YOR205C	RFA3	P26755	122 aa	Known RBP	4.7	□□□□□ -1.66
GEP3	YOR205C	YMR262W	P38430	313 aa		4.7	□□□□□ -1.66
GEP3	YOR205C	ATF1	P40353	525 aa		4.7	□□□□□ -1.66
GEP3	YOR205C	MOB2	P43563	287 aa		4.7	□□□□□ -1.66
GEP3	YOR205C	RPS0B	P46654	252 aa	Known RBP	4.7	□□□□□ -1.66
GEP3	YOR205C	GPG1	P53130	126 aa		4.7	□□□□□ -1.66
GEP3	YOR205C	ALG12	P53730	551 aa		4.7	□□□□□ -1.66
GEP3	YOR205C	BUD25	P85052	153 aa		4.7	□□□□□ -1.66
GEP3	YOR205C	ARG5,6	Q01217	863 aa		4.7	□□□□□ -1.66
GEP3	YOR205C	YPR196W	Q06595	470 aa		4.7	□□□□□ -1.66
GEP3	YOR205C	MRX9	Q07349	420 aa	Known RBP	4.7	□□□□□ -1.66
GEP3	YOR205C	YLR358C	O13565	187 aa		4.69	□□□□□ -1.66
GEP3	YOR205C	SPS4	P09937	338 aa		4.69	□□□□□ -1.66
GEP3	YOR205C	ATG22	P25568	528 aa		4.69	□□□□□ -1.66
GEP3	YOR205C	DEG1	P31115	442 aa	Known RBP	4.69	□□□□□ -1.66
GEP3	YOR205C	PPG1	P32838	368 aa		4.69	□□□□□ -1.66
GEP3	YOR205C	PPZ2	P33329	710 aa		4.69	□□□□□ -1.66
GEP3	YOR205C	GNA1	P43577	159 aa	Predicted RBP	4.69	□□□□□ -1.66
GEP3	YOR205C	CIN2	P46670	268 aa		4.69	□□□□□ -1.66
GEP3	YOR205C	FMP48	P53233	369 aa		4.69	□□□□□ -1.66
GEP3	YOR205C	RSM27	P53305	110 aa		4.69	□□□□□ -1.66
GEP3	YOR205C	ERP4	Q12450	207 aa		4.69	□□□□□ -1.66
GEP3	YOR205C	FOL3	Q12676	427 aa	Predicted RBP	4.69	□□□□□ -1.66
GEP3	YOR205C	YCP4	P25349	247 aa	Known RBP	4.68	□□□□□ -1.66
GEP3	YOR205C	MRPS5	P33759	307 aa		4.68	□□□□□ -1.66
GEP3	YOR205C	MCH2	P36032	473 aa		4.68	□□□□□ -1.66
GEP3	YOR205C	TCM62	P38228	572 aa	Known RBP	4.68	□□□□□ -1.66
GEP3	YOR205C	MTC6	P38849	526 aa		4.68	□□□□□ -1.66
GEP3	YOR205C	BUD8	P41698	603 aa		4.68	□□□□□ -1.66
GEP3	YOR205C	OTU1	P43558	301 aa		4.68	□□□□□ -1.66
GEP3	YOR205C	LSM1	P47017	172 aa	Known RBP	4.68	□□□□□ -1.66
GEP3	YOR205C	SIP18	P50263	79 aa		4.68	□□□□□ -1.66
GEP3	YOR205C	SKP1	P52286	194 aa		4.68	□□□□□ -1.66
GEP3	YOR205C	MRPS16	Q02608	121 aa		4.68	□□□□□ -1.66
GEP3	YOR205C	RSC58	Q07979	502 aa		4.68	□□□□□ -1.66
GEP3	YOR205C	RFU1	Q08003	200 aa		4.68	□□□□□ -1.66
GEP3	YOR205C	PRS5	Q12265	496 aa	Known RBP	4.68	□□□□□ -1.66
GEP3	YOR205C	GLT1	Q12680	2145 aa	Known RBP	4.68	□□□□□ -1.66
GEP3	YOR205C	URA3	P03962	267 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	ARO3	P14843	370 aa	Known RBP	4.67	□□□□□ -1.66
GEP3	YOR205C	GRX2	P17695	143 aa	Known RBP	4.67	□□□□□ -1.66
GEP3	YOR205C	VMA5	P31412	392 aa	Known RBP	4.67	□□□□□ -1.66
GEP3	YOR205C	MTC7	P32633	139 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	PPQ1	P32945	549 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	YKL063C	P35725	167 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	SRL3	P36167	246 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	ARC40	P38328	384 aa	Known RBP	4.67	□□□□□ -1.66
GEP3	YOR205C	GPI16	P38875	610 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	BOL3	P39724	118 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	YND1	P40009	630 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	YER084W	P40057	128 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	PIG2	P40187	538 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	QDR1	P40475	563 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	YIL060W	P40519	144 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	HHT1	P61830	136 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	CRR1	Q05790	422 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	FIT3	Q08907	204 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	TRM13	Q12383	476 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	PRM4	Q12498	284 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	MET3	P08536	511 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	NHP6B	P11633	99 aa	Known RBP	4.67	□□□□□ -1.66
GEP3	YOR205C	RPL3	P14126	387 aa	Known RBP	4.67	□□□□□ -1.66
GEP3	YOR205C	ACH1	P32316	526 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	ARO4	P32449	370 aa	Known RBP	4.67	□□□□□ -1.66
GEP3	YOR205C	CLB6	P32943	380 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	PAN3	P36102	679 aa	Predicted RBP	4.67	□□□□□ -1.66
GEP3	YOR205C	NAT2	P37293	288 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	ARO9	P38840	513 aa	Predicted RBP	4.67	□□□□□ -1.66
GEP3	YOR205C	FLX1	P40464	311 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	YIL029C	P40538	142 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	NSA1	P53136	463 aa	Predicted RBP	4.67	□□□□□ -1.66
GEP3	YOR205C	GTF1	P53260	183 aa	Predicted RBP	4.67	□□□□□ -1.66
GEP3	YOR205C	MRPL50	P53724	139 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	ALG9	P53868	555 aa	Known RBP	4.67	□□□□□ -1.66
GEP3	YOR205C	ACS1	Q01574	713 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	YDR391C	Q04170	232 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	VBA1	Q04301	562 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	ENV7	Q12003	364 aa		4.67	□□□□□ -1.66
GEP3	YOR205C	IRA1	P18963	3092 aa		4.66	□□□□□ -1.66
GEP3	YOR205C	MAK32	P23060	363 aa		4.66	□□□□□ -1.66
GEP3	YOR205C	MRP17	P28778	131 aa		4.66	□□□□□ -1.66
GEP3	YOR205C	ERG3	P32353	365 aa		4.66	□□□□□ -1.66
GEP3	YOR205C	SEN34	P39707	275 aa		4.66	□□□□□ -1.66
GEP3	YOR205C	PHB2	P50085	310 aa		4.66	□□□□□ -1.66
GEP3	YOR205C	UBC13	P52490	153 aa		4.66	□□□□□ -1.66
GEP3	YOR205C	NGL2	Q03264	515 aa	Known RBP	4.66	□□□□□ -1.66
GEP3	YOR205C	YML018C	Q03730	393 aa		4.66	□□□□□ -1.66
GEP3	YOR205C	YDR248C	Q03786	193 aa		4.66	□□□□□ -1.66
GEP3	YOR205C	SPR28	Q04921	423 aa		4.66	□□□□□ -1.66
GEP3	YOR205C	YPR098C	Q06089	161 aa		4.66	□□□□□ -1.66
GEP3	YOR205C	YOR385W	Q08909	290 aa		4.66	□□□□□ -1.66
GEP3	YOR205C	RNH203	Q12338	110 aa		4.66	□□□□□ -1.66
GEP3	YOR205C	HUT1	Q12520	339 aa		4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms