RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeastyeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT1YOR166C YKR104WP0CE69 306 aa1.32□□□□□ -2.2
SWT1YOR166C CCA1P21269 546 aa1.32□□□□□ -2.2
SWT1YOR166C QRI5P32344 111 aa1.32□□□□□ -2.2
SWT1YOR166C SCM4P32564 187 aa1.32□□□□□ -2.2
SWT1YOR166C JEN1P36035 616 aa1.32□□□□□ -2.2
SWT1YOR166C YHL049CP38722 271 aa1.32□□□□□ -2.2
SWT1YOR166C FIS1P40515 155 aa1.32□□□□□ -2.2
SWT1YOR166C MRPL49P40858 161 aaPredicted RBP1.32□□□□□ -2.2
SWT1YOR166C BNA6P43619 295 aa1.32□□□□□ -2.2
SWT1YOR166C PIR5P46999 287 aa1.32□□□□□ -2.2
SWT1YOR166C RPL9BP51401 191 aaKnown RBP1.32□□□□□ -2.2
SWT1YOR166C LSB1P53281 241 aa1.32□□□□□ -2.2
SWT1YOR166C YMD8Q03697 442 aa1.32□□□□□ -2.2
SWT1YOR166C ARV1Q06541 321 aa1.32□□□□□ -2.2
SWT1YOR166C BOL1Q3E793 110 aa1.32□□□□□ -2.2
SWT1YOR166C DPM1P14020 267 aaKnown RBP1.31□□□□□ -2.2
SWT1YOR166C RIB7P33312 244 aa1.31□□□□□ -2.2
SWT1YOR166C CUE1P38428 203 aa1.31□□□□□ -2.2
SWT1YOR166C YER189WP40104 122 aa1.31□□□□□ -2.2
SWT1YOR166C SNX4P47057 423 aa1.31□□□□□ -2.2
SWT1YOR166C NBP35P52920 328 aa1.31□□□□□ -2.2
SWT1YOR166C ERG25P53045 309 aa1.31□□□□□ -2.2
SWT1YOR166C COX20Q04935 205 aa1.31□□□□□ -2.2
SWT1YOR166C FCF1Q05498 189 aaPredicted RBP1.31□□□□□ -2.2
SWT1YOR166C YBL112CQ3E7Y4 105 aa1.31□□□□□ -2.2
SWT1YOR166C YLR462WO13556 202 aa1.3□□□□□ -2.2
SWT1YOR166C SEC22P22214 214 aa1.3□□□□□ -2.2
SWT1YOR166C YAR068WP39564 161 aa1.3□□□□□ -2.2
SWT1YOR166C YEL075CP39972 122 aa1.3□□□□□ -2.2
SWT1YOR166C MEP1P40260 492 aa1.3□□□□□ -2.2
SWT1YOR166C YIL001WP40560 513 aa1.3□□□□□ -2.2
SWT1YOR166C CIS3P47001 227 aa1.3□□□□□ -2.2
SWT1YOR166C SPG4Q04438 115 aa1.3□□□□□ -2.2
SWT1YOR166C FAR8Q05040 523 aa1.3□□□□□ -2.2
SWT1YOR166C CTS2Q06350 511 aa1.3□□□□□ -2.2
SWT1YOR166C PAM18Q07914 168 aa1.3□□□□□ -2.2
SWT1YOR166C ATO3Q12359 275 aa1.3□□□□□ -2.2
SWT1YOR166C YPL247CQ12523 523 aa1.3□□□□□ -2.2
SWT1YOR166C HTL1Q9URQ5 78 aa1.3□□□□□ -2.2
SWT1YOR166C FBA1P14540 359 aaKnown RBP1.29□□□□□ -2.2
SWT1YOR166C TOM40P23644 387 aaKnown RBP1.29□□□□□ -2.2
SWT1YOR166C NRG2P38082 220 aa1.29□□□□□ -2.2
SWT1YOR166C YHR127WP38833 243 aaKnown RBP1.29□□□□□ -2.2
SWT1YOR166C THO1P40040 218 aaKnown RBP1.29□□□□□ -2.2
SWT1YOR166C SNZ3P43545 298 aa1.29□□□□□ -2.2
SWT1YOR166C YFR054CP43622 192 aa1.29□□□□□ -2.2
SWT1YOR166C HAM1P47119 197 aaKnown RBP1.29□□□□□ -2.2
SWT1YOR166C LIA1P47120 325 aaKnown RBP1.29□□□□□ -2.2
SWT1YOR166C MDM34P53083 459 aa1.29□□□□□ -2.2
SWT1YOR166C MRH4P53166 561 aa1.29□□□□□ -2.2
SWT1YOR166C COS6P53344 381 aa1.29□□□□□ -2.2
SWT1YOR166C SWS2P53937 143 aa1.29□□□□□ -2.2
SWT1YOR166C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
SWT1YOR166C KRE28Q04431 385 aa1.29□□□□□ -2.2
SWT1YOR166C KAP95Q06142 861 aaKnown RBP1.29□□□□□ -2.2
SWT1YOR166C YLR173WQ06247 608 aa1.29□□□□□ -2.2
SWT1YOR166C YLR179CQ06252 201 aaKnown RBP1.29□□□□□ -2.2
SWT1YOR166C YCT1Q12235 531 aa1.29□□□□□ -2.2
SWT1YOR166C AGC1Q12482 902 aa1.29□□□□□ -2.2
SWT1YOR166C YOR020W-AQ3E824 90 aa1.29□□□□□ -2.2
SWT1YOR166C COX2P00410 251 aa1.28□□□□□ -2.2
SWT1YOR166C SSO1P32867 290 aa1.28□□□□□ -2.2
SWT1YOR166C PRS4P38063 326 aaPredicted RBP1.28□□□□□ -2.2
SWT1YOR166C ECM13P38195 257 aa1.28□□□□□ -2.2
SWT1YOR166C BIG1P38813 335 aa1.28□□□□□ -2.2
SWT1YOR166C BFR1P38934 470 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
SWT1YOR166C COX15P40086 486 aa1.28□□□□□ -2.2
SWT1YOR166C YGR219WP53307 113 aa1.28□□□□□ -2.2
SWT1YOR166C YNR062CP53748 327 aa1.28□□□□□ -2.2
SWT1YOR166C EMI1Q04406 187 aa1.28□□□□□ -2.2
SWT1YOR166C CSM4Q08955 156 aa1.28□□□□□ -2.2
SWT1YOR166C VPS68Q12016 184 aa1.28□□□□□ -2.2
SWT1YOR166C PPH21P23594 369 aa1.27□□□□□ -2.21
SWT1YOR166C ERG24P32462 438 aaKnown RBP1.27□□□□□ -2.21
SWT1YOR166C MRX3P38172 270 aa1.27□□□□□ -2.21
SWT1YOR166C TCD1P38756 429 aa1.27□□□□□ -2.21
SWT1YOR166C JHD2P47156 728 aaPredicted RBP1.27□□□□□ -2.21
SWT1YOR166C NBP1P52919 319 aaPredicted RBP1.27□□□□□ -2.21
SWT1YOR166C SNZ2P53824 298 aa1.27□□□□□ -2.21
SWT1YOR166C RRN5Q02983 363 aa1.27□□□□□ -2.21
SWT1YOR166C ATG39Q06159 398 aa1.27□□□□□ -2.21
SWT1YOR166C SDO1Q07953 250 aaKnown RBP1.27□□□□□ -2.21
SWT1YOR166C MSW1P04803 379 aa1.26□□□□□ -2.21
SWT1YOR166C RPP0P05317 312 aaKnown RBP1.26□□□□□ -2.21
SWT1YOR166C MSF1P08425 469 aa1.26□□□□□ -2.21
SWT1YOR166C DSF1P0CX08 502 aa1.26□□□□□ -2.21
SWT1YOR166C YNR073CP0CX09 502 aa1.26□□□□□ -2.21
SWT1YOR166C FCY2P17064 533 aa1.26□□□□□ -2.21
SWT1YOR166C MRPL25P23369 157 aa1.26□□□□□ -2.21
SWT1YOR166C YCR016WP25617 290 aaKnown RBP1.26□□□□□ -2.21
SWT1YOR166C HOM6P31116 359 aaKnown RBP1.26□□□□□ -2.21
SWT1YOR166C SKG1P36169 355 aa1.26□□□□□ -2.21
SWT1YOR166C GRE3P38715 327 aaKnown RBP RIP-Chip data1.26□□□□□ -2.21not detected
SWT1YOR166C YHR125WP38831 101 aa1.26□□□□□ -2.21
SWT1YOR166C FMC1P40491 155 aa1.26□□□□□ -2.21
SWT1YOR166C BAT2P47176 376 aaKnown RBP1.26□□□□□ -2.21
SWT1YOR166C NSA1P53136 463 aaPredicted RBP1.26□□□□□ -2.21
SWT1YOR166C ERV29P53337 310 aa1.26□□□□□ -2.21
SWT1YOR166C ABF2Q02486 183 aa1.26□□□□□ -2.21
SWT1YOR166C CGI121Q03705 181 aaKnown RBP1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 60.9 ms