RNA–Protein interactions for RNA: YNL329C

PEX6, Transcript of AAA-peroxin, yeast

Gene PEX6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX6	YNL329C	UTP11	P34247	250 aa	Predicted RBP	2.57	□□□□□ -2
PEX6	YNL329C	ETR1	P38071	380 aa		2.57	□□□□□ -2
PEX6	YNL329C	PHO89	P38361	574 aa		2.57	□□□□□ -2
PEX6	YNL329C	PRM9	P39551	298 aa		2.57	□□□□□ -2
PEX6	YNL329C	FRT2	P39734	528 aa		2.57	□□□□□ -2
PEX6	YNL329C	YFL012W	P43580	148 aa		2.57	□□□□□ -2
PEX6	YNL329C	PET117	Q02771	107 aa		2.57	□□□□□ -2
PEX6	YNL329C	YDR209C	Q03480	137 aa		2.57	□□□□□ -2
PEX6	YNL329C	MCH1	Q07376	486 aa		2.57	□□□□□ -2
PEX6	YNL329C	MMT2	Q08970	484 aa		2.57	□□□□□ -2
PEX6	YNL329C	MCT1	Q12283	360 aa		2.57	□□□□□ -2
PEX6	YNL329C	EMP46	Q12396	444 aa		2.57	□□□□□ -2
PEX6	YNL329C	FLO1	P32768	1537 aa		2.57	□□□□□ -2
PEX6	YNL329C	VPS21	P36017	210 aa	Known RBP	2.57	□□□□□ -2
PEX6	YNL329C	SHC1	P39000	512 aa		2.57	□□□□□ -2
PEX6	YNL329C	PEP8	P40335	379 aa		2.57	□□□□□ -2
PEX6	YNL329C	COA1	P40452	197 aa		2.57	□□□□□ -2
PEX6	YNL329C	YGL039W	P53183	348 aa	Known RBP	2.57	□□□□□ -2
PEX6	YNL329C	CTR3	Q06686	241 aa		2.57	□□□□□ -2
PEX6	YNL329C	YLR012C	Q07927	99 aa		2.57	□□□□□ -2
PEX6	YNL329C	YOR376W	Q08900	122 aa		2.57	□□□□□ -2
PEX6	YNL329C	HRT3	Q12347	344 aa		2.57	□□□□□ -2
PEX6	YNL329C	FOL3	Q12676	427 aa	Predicted RBP	2.57	□□□□□ -2
PEX6	YNL329C	RAD10	P06838	210 aa		2.57	□□□□□ -2
PEX6	YNL329C	SNF4	P12904	322 aa		2.57	□□□□□ -2
PEX6	YNL329C	FUS3	P16892	353 aa	Known RBP	2.57	□□□□□ -2
PEX6	YNL329C	GRX2	P17695	143 aa	Known RBP	2.57	□□□□□ -2
PEX6	YNL329C	YCR016W	P25617	290 aa	Known RBP	2.57	□□□□□ -2
PEX6	YNL329C	CYM1	P32898	989 aa		2.57	□□□□□ -2
PEX6	YNL329C	DBP7	P36120	742 aa	Known RBP	2.57	□□□□□ -2
PEX6	YNL329C	BMT2	P38278	337 aa		2.57	□□□□□ -2
PEX6	YNL329C	SLX1	P38324	304 aa		2.57	□□□□□ -2
PEX6	YNL329C	EGD2	P38879	174 aa	Known RBP	2.57	□□□□□ -2
PEX6	YNL329C	SOP4	P39543	234 aa	Predicted RBP	2.57	□□□□□ -2
PEX6	YNL329C	YHB1	P39676	399 aa	Known RBP	2.57	□□□□□ -2
PEX6	YNL329C	AVT2	P39981	480 aa		2.57	□□□□□ -2
PEX6	YNL329C	YPI1	P43587	155 aa		2.57	□□□□□ -2
PEX6	YNL329C	YFH7	P43591	353 aa		2.57	□□□□□ -2
PEX6	YNL329C	TAD2	P47058	250 aa		2.57	□□□□□ -2
PEX6	YNL329C	YJR054W	P47114	497 aa		2.57	□□□□□ -2
PEX6	YNL329C	PEX31	P53203	462 aa		2.57	□□□□□ -2
PEX6	YNL329C	TIM8	P57744	87 aa		2.57	□□□□□ -2
PEX6	YNL329C	CDC123	Q05791	360 aa		2.57	□□□□□ -2
PEX6	YNL329C	NNT1	Q05874	261 aa		2.57	□□□□□ -2
PEX6	YNL329C	TAZ1	Q06510	381 aa		2.57	□□□□□ -2
PEX6	YNL329C	FDH1	Q08911	376 aa		2.57	□□□□□ -2
PEX6	YNL329C	BI3	Q9ZZW7	517 aa		2.57	□□□□□ -2
PEX6	YNL329C	RIF1	P29539	1916 aa		2.57	□□□□□ -2
PEX6	YNL329C	AIM29	P36154	155 aa		2.56	□□□□□ -2
PEX6	YNL329C	GAA1	P39012	614 aa		2.56	□□□□□ -2
PEX6	YNL329C	GDS1	P41913	522 aa		2.56	□□□□□ -2
PEX6	YNL329C	DIA1	P54005	336 aa		2.56	□□□□□ -2
PEX6	YNL329C	PER33	Q12144	273 aa		2.56	□□□□□ -2
PEX6	YNL329C	YOR029W	Q12243	111 aa		2.56	□□□□□ -2
PEX6	YNL329C	CWP1	P28319	239 aa		2.56	□□□□□ -2
PEX6	YNL329C	MEI4	P29467	408 aa		2.56	□□□□□ -2
PEX6	YNL329C	PDC2	P32896	925 aa		2.56	□□□□□ -2
PEX6	YNL329C	SRL3	P36167	246 aa		2.56	□□□□□ -2
PEX6	YNL329C	TPC1	P53257	314 aa		2.56	□□□□□ -2
PEX6	YNL329C	YDC1	Q02896	317 aa		2.56	□□□□□ -2
PEX6	YNL329C	ADH6	Q04894	360 aa	Known RBP	2.56	□□□□□ -2
PEX6	YNL329C	YTH1	Q06102	208 aa	Predicted RBP	2.56	□□□□□ -2
PEX6	YNL329C	YPL278C	Q08990	100 aa		2.56	□□□□□ -2
PEX6	YNL329C	YOS9	Q99220	542 aa		2.56	□□□□□ -2
PEX6	YNL329C	HIS3	P06633	220 aa		2.55	□□□□□ -2
PEX6	YNL329C	RHO1	P06780	209 aa	Known RBP	2.55	□□□□□ -2
PEX6	YNL329C	DAL82	P21705	255 aa		2.55	□□□□□ -2
PEX6	YNL329C	RPL24B	P24000	155 aa	Known RBP	2.55	□□□□□ -2
PEX6	YNL329C	SUA5	P32579	426 aa		2.55	□□□□□ -2
PEX6	YNL329C	TAF14	P35189	244 aa		2.55	□□□□□ -2
PEX6	YNL329C	GPI18	P38211	433 aa		2.55	□□□□□ -2
PEX6	YNL329C	URA8	P38627	578 aa	Predicted RBP	2.55	□□□□□ -2
PEX6	YNL329C	BIG1	P38813	335 aa		2.55	□□□□□ -2
PEX6	YNL329C	AST2	P39945	430 aa	Known RBP	2.55	□□□□□ -2
PEX6	YNL329C	YGR015C	P53208	328 aa		2.55	□□□□□ -2
PEX6	YNL329C	CUS2	P53830	285 aa	Predicted RBP	2.55	□□□□□ -2
PEX6	YNL329C	YMR099C	Q03161	297 aa	Known RBP	2.55	□□□□□ -2
PEX6	YNL329C	YOR342C	Q12182	319 aa		2.55	□□□□□ -2
PEX6	YNL329C	YDR018C	Q12185	396 aa		2.55	□□□□□ -2
PEX6	YNL329C	TDH2	P00358	332 aa	Known RBP	2.55	□□□□□ -2
PEX6	YNL329C	TFS1	P14306	219 aa		2.55	□□□□□ -2
PEX6	YNL329C	VHT1	P53241	593 aa		2.55	□□□□□ -2
PEX6	YNL329C	MRPL50	P53724	139 aa		2.55	□□□□□ -2
PEX6	YNL329C	PRM4	Q12498	284 aa		2.55	□□□□□ -2
PEX6	YNL329C	ATP6	P00854	259 aa		2.55	□□□□□ -2
PEX6	YNL329C	CDC13	P32797	924 aa	Known RBP	2.55	□□□□□ -2
PEX6	YNL329C	MCH2	P36032	473 aa		2.55	□□□□□ -2
PEX6	YNL329C	SDS24	P38314	527 aa		2.55	□□□□□ -2
PEX6	YNL329C	OM14	P38325	134 aa		2.55	□□□□□ -2
PEX6	YNL329C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	2.55	□□□□□ -2	not detected
PEX6	YNL329C	GAB1	P41733	394 aa		2.55	□□□□□ -2
PEX6	YNL329C	CPR7	P47103	393 aa		2.55	□□□□□ -2
PEX6	YNL329C	UBC13	P52490	153 aa		2.55	□□□□□ -2
PEX6	YNL329C	FMP48	P53233	369 aa		2.55	□□□□□ -2
PEX6	YNL329C	YML108W	Q03759	105 aa		2.55	□□□□□ -2
PEX6	YNL329C	YDR222W	Q04925	415 aa		2.55	□□□□□ -2
PEX6	YNL329C	DPP1	Q05521	289 aa		2.55	□□□□□ -2
PEX6	YNL329C	REV1	P12689	985 aa		2.54	□□□□□ -2
PEX6	YNL329C	SNZ3	P43545	298 aa		2.54	□□□□□ -2
PEX6	YNL329C	ASG7	P46993	209 aa		2.54	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 82.2 ms