RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDF1	YLR399C	YPQ1	Q12010	308 aa		11.1	□□□□□ -0.63
BDF1	YLR399C	MDL1	P33310	695 aa		11.09	□□□□□ -0.63
BDF1	YLR399C	ARC40	P38328	384 aa	Known RBP	11.09	□□□□□ -0.63
BDF1	YLR399C	PTC7	P38797	343 aa		11.09	□□□□□ -0.63
BDF1	YLR399C	SLZ1	P40167	298 aa		11.09	□□□□□ -0.63
BDF1	YLR399C	ASK10	P48361	1146 aa		11.09	□□□□□ -0.63
BDF1	YLR399C	OST3	P48439	350 aa		11.09	□□□□□ -0.63
BDF1	YLR399C	ERP1	Q05359	219 aa	Known RBP	11.09	□□□□□ -0.63
BDF1	YLR399C	YLR118C	Q12354	227 aa		11.09	□□□□□ -0.63
BDF1	YLR399C	AIM45	Q12480	344 aa	Known RBP	11.09	□□□□□ -0.63
BDF1	YLR399C	EHD3	P28817	500 aa		11.08	□□□□□ -0.63
BDF1	YLR399C	PRE2	P30656	287 aa	Known RBP	11.08	□□□□□ -0.63
BDF1	YLR399C	FMP10	P40098	244 aa		11.08	□□□□□ -0.63
BDF1	YLR399C	AIR1	P40507	360 aa	Known RBP	11.08	□□□□□ -0.63
BDF1	YLR399C	SEC13	Q04491	297 aa	Known RBP	11.08	□□□□□ -0.63
BDF1	YLR399C	PUS5	Q06244	254 aa		11.08	□□□□□ -0.63
BDF1	YLR399C	DET1	Q99288	334 aa	Known RBP	11.08	□□□□□ -0.63
BDF1	YLR399C	PET18	P25362	215 aa		11.08	□□□□□ -0.64
BDF1	YLR399C	SLX9	P53251	210 aa	Predicted RBP	11.08	□□□□□ -0.64
BDF1	YLR399C	ELP4	Q02884	456 aa	Known RBP	11.08	□□□□□ -0.64
BDF1	YLR399C	YML018C	Q03730	393 aa		11.08	□□□□□ -0.64
BDF1	YLR399C	SNO4	Q04902	237 aa		11.08	□□□□□ -0.64
BDF1	YLR399C	SNT309	Q06091	175 aa	Predicted RBP	11.08	□□□□□ -0.64
BDF1	YLR399C	YLR456W	Q06199	204 aa		11.08	□□□□□ -0.64
BDF1	YLR399C	HSP33	Q08914	237 aa	Known RBP	11.08	□□□□□ -0.64
BDF1	YLR399C	HSP32	Q08992	237 aa		11.08	□□□□□ -0.64
BDF1	YLR399C	TRR1	P29509	319 aa	Known RBP	11.07	□□□□□ -0.64
BDF1	YLR399C	YEA6	P39953	335 aa		11.07	□□□□□ -0.64
BDF1	YLR399C	JHD1	P40034	492 aa		11.07	□□□□□ -0.64
BDF1	YLR399C	GAT2	P40209	560 aa		11.07	□□□□□ -0.64
BDF1	YLR399C	YIL161W	P40449	235 aa	Known RBP	11.07	□□□□□ -0.64
BDF1	YLR399C	GLC8	P41818	229 aa		11.07	□□□□□ -0.64
BDF1	YLR399C	YGL262W	P53054	175 aa		11.07	□□□□□ -0.64
BDF1	YLR399C	YPL014W	Q02606	381 aa		11.07	□□□□□ -0.64
BDF1	YLR399C	SGA1	P08019	549 aa		11.07	□□□□□ -0.64
BDF1	YLR399C	MET3	P08536	511 aa		11.07	□□□□□ -0.64
BDF1	YLR399C	CKA1	P15790	372 aa		11.07	□□□□□ -0.64
BDF1	YLR399C	YSR3	P23501	404 aa		11.07	□□□□□ -0.64
BDF1	YLR399C	IKS1	P47042	667 aa		11.07	□□□□□ -0.64
BDF1	YLR399C	ERG26	P53199	349 aa	Known RBP	11.07	□□□□□ -0.64
BDF1	YLR399C	SMM1	P53720	384 aa	Known RBP	11.07	□□□□□ -0.64
BDF1	YLR399C	TDA6	Q06466	467 aa		11.07	□□□□□ -0.64
BDF1	YLR399C	SRF1	Q12516	437 aa		11.07	□□□□□ -0.64
BDF1	YLR399C	CHK1	P38147	527 aa		11.06	□□□□□ -0.64
BDF1	YLR399C	YER010C	P40011	234 aa		11.06	□□□□□ -0.64
BDF1	YLR399C	YDC1	Q02896	317 aa		11.06	□□□□□ -0.64
BDF1	YLR399C	EKI1	Q03764	534 aa		11.06	□□□□□ -0.64
BDF1	YLR399C	RUB1	Q03919	77 aa		11.06	□□□□□ -0.64
BDF1	YLR399C	RPL9A	P05738	191 aa	Known RBP	11.05	□□□□□ -0.64
BDF1	YLR399C	MTF1	P14908	341 aa	Known RBP	11.05	□□□□□ -0.64
BDF1	YLR399C	PDE1	P22434	369 aa		11.05	□□□□□ -0.64
BDF1	YLR399C	MRS4	P23500	304 aa		11.05	□□□□□ -0.64
BDF1	YLR399C	RPL9B	P51401	191 aa	Known RBP	11.05	□□□□□ -0.64
BDF1	YLR399C	MTM1	P53320	366 aa		11.05	□□□□□ -0.64
BDF1	YLR399C	RSM23	Q01163	450 aa		11.05	□□□□□ -0.64
BDF1	YLR399C	CAB5	Q03941	241 aa		11.05	□□□□□ -0.64
BDF1	YLR399C	STE4	P18851	423 aa		11.05	□□□□□ -0.64
BDF1	YLR399C	CPR2	P23285	205 aa		11.05	□□□□□ -0.64
BDF1	YLR399C	DEG1	P31115	442 aa	Known RBP	11.05	□□□□□ -0.64
BDF1	YLR399C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	11.05	□□□□□ -0.64	not detected
BDF1	YLR399C	SUI1	P32911	108 aa	Known RBP	11.05	□□□□□ -0.64
BDF1	YLR399C	SUR2	P38992	349 aa		11.05	□□□□□ -0.64
BDF1	YLR399C	YGR149W	P48236	432 aa		11.05	□□□□□ -0.64
BDF1	YLR399C	ACS2	P52910	683 aa	Known RBP	11.05	□□□□□ -0.64
BDF1	YLR399C	MRP51	Q02950	344 aa		11.05	□□□□□ -0.64
BDF1	YLR399C	YDR248C	Q03786	193 aa		11.05	□□□□□ -0.64
BDF1	YLR399C	HNT1	Q04344	158 aa	Known RBP	11.05	□□□□□ -0.64
BDF1	YLR399C	RTT103	Q05543	409 aa		11.05	□□□□□ -0.64
BDF1	YLR399C	YDL085C-A	Q3E7B7	68 aa	Known RBP	11.05	□□□□□ -0.64
BDF1	YLR399C	CCH1	P50077	2039 aa		11.05	□□□□□ -0.64
BDF1	YLR399C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	11.04	□□□□□ -0.64	not detected
BDF1	YLR399C	ATP5	P09457	212 aa		11.04	□□□□□ -0.64
BDF1	YLR399C	RPS25B	P0C0T4	108 aa	Known RBP	11.04	□□□□□ -0.64
BDF1	YLR399C	YGL235W	P53071	178 aa		11.04	□□□□□ -0.64
BDF1	YLR399C	SAE3	P89114	91 aa		11.04	□□□□□ -0.64
BDF1	YLR399C	TMN2	Q04562	672 aa		11.04	□□□□□ -0.64
BDF1	YLR399C	RPS25A	Q3E792	108 aa	Predicted RBP	11.04	□□□□□ -0.64
BDF1	YLR399C	RPB5	P20434	215 aa		11.04	□□□□□ -0.64
BDF1	YLR399C	FLO5	P38894	1075 aa		11.04	□□□□□ -0.64
BDF1	YLR399C	ALG12	P53730	551 aa		11.04	□□□□□ -0.64
BDF1	YLR399C	INP1	Q03694	420 aa		11.04	□□□□□ -0.64
BDF1	YLR399C	ATC1	Q04005	294 aa		11.04	□□□□□ -0.64
BDF1	YLR399C	FDH1	Q08911	376 aa		11.04	□□□□□ -0.64
BDF1	YLR399C	SRL2	Q12020	392 aa		11.04	□□□□□ -0.64
BDF1	YLR399C	PAU19	P0CE85	124 aa		11.03	□□□□□ -0.64
BDF1	YLR399C	PAU21	P0CE86	164 aa		11.03	□□□□□ -0.64
BDF1	YLR399C	PAU22	P0CE87	164 aa		11.03	□□□□□ -0.64
BDF1	YLR399C	PAU3	P25610	124 aa		11.03	□□□□□ -0.64
BDF1	YLR399C	MRPS9	P38120	278 aa		11.03	□□□□□ -0.64
BDF1	YLR399C	HEM14	P40012	539 aa		11.03	□□□□□ -0.64
BDF1	YLR399C	CCC1	P47818	322 aa		11.03	□□□□□ -0.64
BDF1	YLR399C	CWC27	Q02770	301 aa		11.03	□□□□□ -0.64
BDF1	YLR399C	ROT1	Q03691	256 aa		11.03	□□□□□ -0.64
BDF1	YLR399C	ROY1	Q04847	553 aa		11.03	□□□□□ -0.64
BDF1	YLR399C	ASM4	Q05166	528 aa		11.03	□□□□□ -0.64
BDF1	YLR399C	MSB2	P32334	1306 aa		11.03	□□□□□ -0.64
BDF1	YLR399C	COQ3	P27680	312 aa		11.02	□□□□□ -0.64
BDF1	YLR399C	ALK2	P32789	676 aa	Predicted RBP	11.02	□□□□□ -0.64
BDF1	YLR399C	TRS20	P38334	175 aa		11.02	□□□□□ -0.64
BDF1	YLR399C	ALG9	P53868	555 aa	Known RBP	11.02	□□□□□ -0.64

Retrieved 100 of 5,963 RNA–protein pairs in 64.8 ms