RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	SOK1	P40317	901 aa		5.5	□□□□□ -1.53
TIF1	YKR059W	YIL169C	P40442	995 aa		5.5	□□□□□ -1.53
TIF1	YKR059W	GOR1	P53839	350 aa		5.5	□□□□□ -1.53
TIF1	YKR059W	ECM11	Q04110	302 aa		5.5	□□□□□ -1.53
TIF1	YKR059W	YLR283W	Q05867	314 aa		5.5	□□□□□ -1.53
TIF1	YKR059W	YRA1	Q12159	226 aa	Known RBP	5.5	□□□□□ -1.53
TIF1	YKR059W	ATG31	Q12421	196 aa		5.5	□□□□□ -1.53
TIF1	YKR059W	DET1	Q99288	334 aa	Known RBP	5.5	□□□□□ -1.53
TIF1	YKR059W	DYN1	P36022	4092 aa		5.49	□□□□□ -1.53
TIF1	YKR059W	YFR010W-A	P0C5N0	62 aa		5.49	□□□□□ -1.53
TIF1	YKR059W	AIM17	P23180	465 aa	Known RBP	5.49	□□□□□ -1.53
TIF1	YKR059W	VPS51	P36116	164 aa		5.49	□□□□□ -1.53
TIF1	YKR059W	FES1	P38260	290 aa		5.49	□□□□□ -1.53
TIF1	YKR059W	PHO89	P38361	574 aa		5.49	□□□□□ -1.53
TIF1	YKR059W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	5.49	□□□□□ -1.53	not detected
TIF1	YKR059W	SMX2	P40204	77 aa	Known RBP	5.49	□□□□□ -1.53
TIF1	YKR059W	YIA6	P40556	373 aa		5.49	□□□□□ -1.53
TIF1	YKR059W	PGU1	P47180	361 aa		5.49	□□□□□ -1.53
TIF1	YKR059W	RPM2	Q02773	1202 aa		5.49	□□□□□ -1.53
TIF1	YKR059W	YPL077C	Q02831	240 aa		5.49	□□□□□ -1.53
TIF1	YKR059W	YLR281C	Q05863	155 aa		5.49	□□□□□ -1.53
TIF1	YKR059W	HRI1	Q05905	244 aa	Known RBP	5.49	□□□□□ -1.53
TIF1	YKR059W	MDM36	Q06820	579 aa		5.49	□□□□□ -1.53
TIF1	YKR059W	Q0144	Q9ZZW2	109 aa		5.49	□□□□□ -1.53
TIF1	YKR059W	PIS1	P06197	220 aa	Known RBP	5.48	□□□□□ -1.53
TIF1	YKR059W	RPL24B	P24000	155 aa	Known RBP	5.48	□□□□□ -1.53
TIF1	YKR059W	NDC1	P32500	655 aa		5.48	□□□□□ -1.53
TIF1	YKR059W	SBE22	P38814	852 aa		5.48	□□□□□ -1.53
TIF1	YKR059W	MTC6	P38849	526 aa		5.48	□□□□□ -1.53
TIF1	YKR059W	YMR144W	P40214	342 aa	Known RBP	5.48	□□□□□ -1.53
TIF1	YKR059W	MAL12	P53341	584 aa		5.48	□□□□□ -1.53
TIF1	YKR059W	YDR124W	Q04608	324 aa		5.48	□□□□□ -1.53
TIF1	YKR059W	ASR1	Q06834	288 aa		5.48	□□□□□ -1.53
TIF1	YKR059W	GAT3	Q07928	141 aa		5.48	□□□□□ -1.53
TIF1	YKR059W	FDH1	Q08911	376 aa		5.48	□□□□□ -1.53
TIF1	YKR059W	APC9	Q12107	265 aa		5.48	□□□□□ -1.53
TIF1	YKR059W	YOR029W	Q12243	111 aa		5.48	□□□□□ -1.53
TIF1	YKR059W	PCL9	Q12477	304 aa		5.48	□□□□□ -1.53
TIF1	YKR059W	CDC39	P25655	2108 aa	Known RBP	5.47	□□□□□ -1.53
TIF1	YKR059W	COS2	P0CX12	379 aa		5.47	□□□□□ -1.53
TIF1	YKR059W	COS3	P0CX13	379 aa		5.47	□□□□□ -1.53
TIF1	YKR059W	NHP6B	P11633	99 aa	Known RBP	5.47	□□□□□ -1.53
TIF1	YKR059W	FUS3	P16892	353 aa	Known RBP	5.47	□□□□□ -1.53
TIF1	YKR059W	YKL063C	P35725	167 aa		5.47	□□□□□ -1.53
TIF1	YKR059W	AIM29	P36154	155 aa		5.47	□□□□□ -1.53
TIF1	YKR059W	YGP1	P38616	354 aa	Known RBP	5.47	□□□□□ -1.53
TIF1	YKR059W	MAM33	P40513	266 aa		5.47	□□□□□ -1.53
TIF1	YKR059W	COS4	P43542	379 aa		5.47	□□□□□ -1.53
TIF1	YKR059W	RPS12	P48589	143 aa	Known RBP	5.47	□□□□□ -1.53
TIF1	YKR059W	MPA43	P53583	542 aa	Predicted RBP	5.47	□□□□□ -1.53
TIF1	YKR059W	MRPS17	Q03246	237 aa	Predicted RBP	5.47	□□□□□ -1.53
TIF1	YKR059W	FAR10	Q06001	478 aa		5.47	□□□□□ -1.53
TIF1	YKR059W	YLR053C	Q12026	108 aa		5.47	□□□□□ -1.53
TIF1	YKR059W	TDH2	P00358	332 aa	Known RBP	5.46	□□□□□ -1.54
TIF1	YKR059W	ATP6	P00854	259 aa		5.46	□□□□□ -1.54
TIF1	YKR059W	ARG80	P07249	177 aa		5.46	□□□□□ -1.54
TIF1	YKR059W	CBP6	P07253	162 aa	Predicted RBP	5.46	□□□□□ -1.54
TIF1	YKR059W	YHR214C-D	P0CX93	97 aa		5.46	□□□□□ -1.54
TIF1	YKR059W	MDM10	P18409	493 aa		5.46	□□□□□ -1.54
TIF1	YKR059W	BUB2	P26448	306 aa	Predicted RBP	5.46	□□□□□ -1.54
TIF1	YKR059W	RPL16A	P26784	199 aa	Known RBP	5.46	□□□□□ -1.54
TIF1	YKR059W	NUP2	P32499	720 aa		5.46	□□□□□ -1.54
TIF1	YKR059W	CAF4	P36130	643 aa		5.46	□□□□□ -1.54
TIF1	YKR059W	NAT2	P37293	288 aa		5.46	□□□□□ -1.54
TIF1	YKR059W	PRS4	P38063	326 aa	Predicted RBP	5.46	□□□□□ -1.54
TIF1	YKR059W	ECM8	P38246	354 aa		5.46	□□□□□ -1.54
TIF1	YKR059W	BIG1	P38813	335 aa		5.46	□□□□□ -1.54
TIF1	YKR059W	YIL029C	P40538	142 aa		5.46	□□□□□ -1.54
TIF1	YKR059W	NOP19	P53317	196 aa	Predicted RBP	5.46	□□□□□ -1.54
TIF1	YKR059W	RPL15B	P54780	204 aa	Predicted RBP	5.46	□□□□□ -1.54
TIF1	YKR059W	RNY1	Q02933	434 aa	Known RBP	5.46	□□□□□ -1.54
TIF1	YKR059W	SEI1	Q06058	285 aa		5.46	□□□□□ -1.54
TIF1	YKR059W	HNT3	Q08702	217 aa		5.46	□□□□□ -1.54
TIF1	YKR059W	POM33	Q12164	279 aa		5.46	□□□□□ -1.54
TIF1	YKR059W	EAF3	Q12432	401 aa		5.46	□□□□□ -1.54
TIF1	YKR059W	PSF1	Q12488	208 aa		5.46	□□□□□ -1.54
TIF1	YKR059W	BLM10	P43583	2143 aa		5.45	□□□□□ -1.54
TIF1	YKR059W	ADH2	P00331	348 aa	Known RBP	5.45	□□□□□ -1.54
TIF1	YKR059W	ATR1	P13090	542 aa		5.45	□□□□□ -1.54
TIF1	YKR059W	YOR062C	P36025	268 aa		5.45	□□□□□ -1.54
TIF1	YKR059W	YHL037C	P38733	133 aa		5.45	□□□□□ -1.54
TIF1	YKR059W	SEN34	P39707	275 aa		5.45	□□□□□ -1.54
TIF1	YKR059W	JLP2	P40206	208 aa		5.45	□□□□□ -1.54
TIF1	YKR059W	HIT1	P46973	164 aa		5.45	□□□□□ -1.54
TIF1	YKR059W	TAD2	P47058	250 aa		5.45	□□□□□ -1.54
TIF1	YKR059W	TPC1	P53257	314 aa		5.45	□□□□□ -1.54
TIF1	YKR059W	MET31	Q03081	177 aa		5.45	□□□□□ -1.54
TIF1	YKR059W	YDR249C	Q03787	373 aa		5.45	□□□□□ -1.54
TIF1	YKR059W	KRE28	Q04431	385 aa		5.45	□□□□□ -1.54
TIF1	YKR059W	PAL1	Q05518	499 aa	Known RBP	5.45	□□□□□ -1.54
TIF1	YKR059W	SDO1	Q07953	250 aa	Known RBP	5.45	□□□□□ -1.54
TIF1	YKR059W	CTA1	P15202	515 aa		5.44	□□□□□ -1.54
TIF1	YKR059W	MCK1	P21965	375 aa	Known RBP	5.44	□□□□□ -1.54
TIF1	YKR059W	YCP4	P25349	247 aa	Known RBP	5.44	□□□□□ -1.54
TIF1	YKR059W	CAT2	P32796	670 aa	Known RBP	5.44	□□□□□ -1.54
TIF1	YKR059W	PMU1	P36069	295 aa		5.44	□□□□□ -1.54
TIF1	YKR059W	DTR1	P38125	572 aa		5.44	□□□□□ -1.54
TIF1	YKR059W	OST1	P41543	476 aa	Known RBP	5.44	□□□□□ -1.54
TIF1	YKR059W	MEP2	P41948	499 aa		5.44	□□□□□ -1.54
TIF1	YKR059W	YGR210C	P42942	411 aa		5.44	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms