RNA–Protein interactions for RNA: YKL044W

YKL044W, Transcript of Protein of unknown function, yeast

Gene YKL044W, Length 321 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKL044W	YKL044W	ATO3	Q12359	275 aa		1.21	□□□□□ -2.22
YKL044W	YKL044W	EMP46	Q12396	444 aa		1.21	□□□□□ -2.22
YKL044W	YKL044W	DBP3	P20447	523 aa	Known RBP	1.2	□□□□□ -2.22
YKL044W	YKL044W	PEX4	P29340	183 aa		1.2	□□□□□ -2.22
YKL044W	YKL044W	DDI1	P40087	428 aa		1.2	□□□□□ -2.22
YKL044W	YKL044W	YGR026W	P53217	278 aa		1.2	□□□□□ -2.22
YKL044W	YKL044W	YDR124W	Q04608	324 aa		1.2	□□□□□ -2.22
YKL044W	YKL044W	RAS2	P01120	322 aa	Known RBP	1.19	□□□□□ -2.22
YKL044W	YKL044W	Q0255	P03881	472 aa		1.19	□□□□□ -2.22
YKL044W	YKL044W	CDC7	P06243	507 aa		1.19	□□□□□ -2.22
YKL044W	YKL044W	SSA3	P09435	649 aa	Known RBP	1.19	□□□□□ -2.22
YKL044W	YKL044W	YOL162W	P0CF19	215 aa		1.19	□□□□□ -2.22
YKL044W	YKL044W	VTC1	P40046	129 aa	RIP-Chip data	1.19	□□□□□ -2.22	not detected
YKL044W	YKL044W	DSN1	P40568	576 aa		1.19	□□□□□ -2.22
YKL044W	YKL044W	YMR279C	Q03263	540 aa		1.19	□□□□□ -2.22
YKL044W	YKL044W	YPR147C	Q06522	304 aa	Known RBP	1.19	□□□□□ -2.22
YKL044W	YKL044W	AKR2	Q12013	749 aa		1.19	□□□□□ -2.22
YKL044W	YKL044W	SCL1	P21243	252 aa	Known RBP	1.18	□□□□□ -2.22
YKL044W	YKL044W	VPS3	P23643	1011 aa		1.18	□□□□□ -2.22
YKL044W	YKL044W	DOG1	P38774	246 aa		1.18	□□□□□ -2.22
YKL044W	YKL044W	YHR125W	P38831	101 aa		1.18	□□□□□ -2.22
YKL044W	YKL044W	RCY1	P39531	840 aa		1.18	□□□□□ -2.22
YKL044W	YKL044W	YER189W	P40104	122 aa		1.18	□□□□□ -2.22
YKL044W	YKL044W	CIS3	P47001	227 aa		1.18	□□□□□ -2.22
YKL044W	YKL044W	ERG25	P53045	309 aa		1.18	□□□□□ -2.22
YKL044W	YKL044W	KAP114	P53067	1004 aa		1.18	□□□□□ -2.22
YKL044W	YKL044W	GOT1	Q03554	138 aa		1.18	□□□□□ -2.22
YKL044W	YKL044W	OST6	Q03723	332 aa		1.18	□□□□□ -2.22
YKL044W	YKL044W	MRPS8	Q03799	155 aa		1.18	□□□□□ -2.22
YKL044W	YKL044W	ATG17	Q06410	417 aa		1.18	□□□□□ -2.22
YKL044W	YKL044W	SWI1	P09547	1314 aa		1.17	□□□□□ -2.22
YKL044W	YKL044W	YLR462W	O13556	202 aa		1.17	□□□□□ -2.22
YKL044W	YKL044W	DSF1	P0CX08	502 aa		1.17	□□□□□ -2.22
YKL044W	YKL044W	YNR073C	P0CX09	502 aa		1.17	□□□□□ -2.22
YKL044W	YKL044W	MRP1	P10662	321 aa	Known RBP	1.17	□□□□□ -2.22
YKL044W	YKL044W	QRI5	P32344	111 aa		1.17	□□□□□ -2.22
YKL044W	YKL044W	VMA11	P32842	164 aa		1.17	□□□□□ -2.22
YKL044W	YKL044W	YEL075C	P39972	122 aa		1.17	□□□□□ -2.22
YKL044W	YKL044W	BMT5	P40493	336 aa		1.17	□□□□□ -2.22
YKL044W	YKL044W	PRM10	P42946	383 aa		1.17	□□□□□ -2.22
YKL044W	YKL044W	SMD3	P43321	101 aa	Known RBP	1.17	□□□□□ -2.22
YKL044W	YKL044W	YGL034C	P53186	121 aa		1.17	□□□□□ -2.22
YKL044W	YKL044W	SNF8	Q12483	233 aa		1.17	□□□□□ -2.22
YKL044W	YKL044W	MDH2	P22133	377 aa		1.16	□□□□□ -2.22
YKL044W	YKL044W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	1.16	□□□□□ -2.22	not detected
YKL044W	YKL044W	YKR045C	P36138	183 aa		1.16	□□□□□ -2.22
YKL044W	YKL044W	PHO88	P38264	188 aa	Predicted RBP	1.16	□□□□□ -2.22
YKL044W	YKL044W	EMC2	P47133	292 aa	Known RBP	1.16	□□□□□ -2.22
YKL044W	YKL044W	YGR219W	P53307	113 aa		1.16	□□□□□ -2.22
YKL044W	YKL044W	CYT2	Q00873	224 aa		1.16	□□□□□ -2.22
YKL044W	YKL044W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	1.16	□□□□□ -2.22	not detected
YKL044W	YKL044W	DCN1	Q12395	269 aa		1.16	□□□□□ -2.22
YKL044W	YKL044W	MSA2	P36157	363 aa		1.15	□□□□□ -2.23
YKL044W	YKL044W	FZO1	P38297	855 aa		1.15	□□□□□ -2.23
YKL044W	YKL044W	DSE2	P38844	325 aa		1.15	□□□□□ -2.23
YKL044W	YKL044W	YER135C	P40082	130 aa		1.15	□□□□□ -2.23
YKL044W	YKL044W	MRH4	P53166	561 aa		1.15	□□□□□ -2.23
YKL044W	YKL044W	ALG11	P53954	548 aa	Known RBP	1.15	□□□□□ -2.23
YKL044W	YKL044W	FAR8	Q05040	523 aa		1.15	□□□□□ -2.23
YKL044W	YKL044W	INM2	Q05533	292 aa		1.15	□□□□□ -2.23
YKL044W	YKL044W	SYC1	Q08553	188 aa	Predicted RBP	1.15	□□□□□ -2.23
YKL044W	YKL044W	UBR2	Q07963	1872 aa		1.14	□□□□□ -2.23
YKL044W	YKL044W	COX5A	P00424	153 aa		1.14	□□□□□ -2.23
YKL044W	YKL044W	RPL24A	P04449	155 aa	Known RBP	1.14	□□□□□ -2.23
YKL044W	YKL044W	RPL9A	P05738	191 aa	Known RBP	1.14	□□□□□ -2.23
YKL044W	YKL044W	YKR104W	P0CE69	306 aa		1.14	□□□□□ -2.23
YKL044W	YKL044W	JEN1	P36035	616 aa		1.14	□□□□□ -2.23
YKL044W	YKL044W	EBP2	P36049	427 aa	Known RBP	1.14	□□□□□ -2.23
YKL044W	YKL044W	MRPL39	P36533	70 aa		1.14	□□□□□ -2.23
YKL044W	YKL044W	YHR022C	P38763	256 aa		1.14	□□□□□ -2.23
YKL044W	YKL044W	SNZ3	P43545	298 aa		1.14	□□□□□ -2.23
YKL044W	YKL044W	RPL9B	P51401	191 aa	Known RBP	1.14	□□□□□ -2.23
YKL044W	YKL044W	RRP40	Q08285	240 aa	Known RBP	1.14	□□□□□ -2.23
YKL044W	YKL044W	ERG24	P32462	438 aa	Known RBP	1.13	□□□□□ -2.23
YKL044W	YKL044W	ERV15	P38312	142 aa		1.13	□□□□□ -2.23
YKL044W	YKL044W	PRS2	P38620	318 aa	Known RBP	1.13	□□□□□ -2.23
YKL044W	YKL044W	YGL159W	P53110	370 aa		1.13	□□□□□ -2.23
YKL044W	YKL044W	ERV25	P54837	211 aa	Known RBP	1.13	□□□□□ -2.23
YKL044W	YKL044W	YDR209C	Q03480	137 aa		1.13	□□□□□ -2.23
YKL044W	YKL044W	YLR030W	Q07967	263 aa		1.13	□□□□□ -2.23
YKL044W	YKL044W	DAL82	P21705	255 aa		1.12	□□□□□ -2.23
YKL044W	YKL044W	OAC1	P32332	324 aa		1.12	□□□□□ -2.23
YKL044W	YKL044W	SGE1	P33335	543 aa		1.12	□□□□□ -2.23
YKL044W	YKL044W	CTR2	P38865	189 aa		1.12	□□□□□ -2.23
YKL044W	YKL044W	FIS1	P40515	155 aa		1.12	□□□□□ -2.23
YKL044W	YKL044W	YKE4	P40544	346 aa		1.12	□□□□□ -2.23
YKL044W	YKL044W	RMR1	P53060	241 aa		1.12	□□□□□ -2.23
YKL044W	YKL044W	GTR2	P53290	341 aa		1.12	□□□□□ -2.23
YKL044W	YKL044W	ADH6	Q04894	360 aa	Known RBP	1.12	□□□□□ -2.23
YKL044W	YKL044W	YPL257W	Q08974	193 aa		1.12	□□□□□ -2.23
YKL044W	YKL044W	COX2	P00410	251 aa		1.11	□□□□□ -2.23
YKL044W	YKL044W	MSW1	P04803	379 aa		1.11	□□□□□ -2.23
YKL044W	YKL044W	YBR219C	P38317	127 aa		1.11	□□□□□ -2.23
YKL044W	YKL044W	THO1	P40040	218 aa	Known RBP	1.11	□□□□□ -2.23
YKL044W	YKL044W	SPG4	Q04438	115 aa		1.11	□□□□□ -2.23
YKL044W	YKL044W	YPR098C	Q06089	161 aa		1.11	□□□□□ -2.23
YKL044W	YKL044W	COQ10	Q08058	207 aa		1.11	□□□□□ -2.23
YKL044W	YKL044W	USB1	Q12208	290 aa	Known RBP	1.11	□□□□□ -2.23
YKL044W	YKL044W	DDI2	P0CH63	225 aa		1.1	□□□□□ -2.23
YKL044W	YKL044W	DDI3	P0CH64	225 aa		1.1	□□□□□ -2.23

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms