RNA–Protein interactions for RNA: YHR053C

CUP1-1, Transcript of Metallothionein, yeastyeast

Gene CUP1-1, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-1YHR053C YFR054CP43622 192 aa2.05□□□□□ -2.08
CUP1-1YHR053C RSM10Q03201 203 aa2.05□□□□□ -2.08
CUP1-1YHR053C PRM15Q03262 622 aa2.05□□□□□ -2.08
CUP1-1YHR053C ATG17Q06410 417 aa2.05□□□□□ -2.08
CUP1-1YHR053C YPR147CQ06522 304 aaKnown RBP2.05□□□□□ -2.08
CUP1-1YHR053C BBP1Q12365 385 aa2.05□□□□□ -2.08
CUP1-1YHR053C SNF8Q12483 233 aa2.05□□□□□ -2.08
CUP1-1YHR053C QRI5P32344 111 aa2.04□□□□□ -2.08
CUP1-1YHR053C PRS4P38063 326 aaPredicted RBP2.04□□□□□ -2.08
CUP1-1YHR053C COS8P38723 381 aa2.04□□□□□ -2.08
CUP1-1YHR053C ADH6Q04894 360 aaKnown RBP2.04□□□□□ -2.08
CUP1-1YHR053C EMP46Q12396 444 aa2.04□□□□□ -2.08
CUP1-1YHR053C PRS2P38620 318 aaKnown RBP2.03□□□□□ -2.08
CUP1-1YHR053C YHB1P39676 399 aaKnown RBP2.03□□□□□ -2.08
CUP1-1YHR053C ARC15P40518 154 aaRIP-Chip data2.03□□□□□ -2.08not detected
CUP1-1YHR053C GOT1Q03554 138 aa2.03□□□□□ -2.08
CUP1-1YHR053C YLR179CQ06252 201 aaKnown RBP2.03□□□□□ -2.08
CUP1-1YHR053C BOL1Q3E793 110 aa2.03□□□□□ -2.08
CUP1-1YHR053C COX2P00410 251 aa2.02□□□□□ -2.09
CUP1-1YHR053C DAL82P21705 255 aa2.02□□□□□ -2.09
CUP1-1YHR053C YER189WP40104 122 aa2.02□□□□□ -2.09
CUP1-1YHR053C DAD3P69850 94 aa2.02□□□□□ -2.09
CUP1-1YHR053C CTF19Q02732 369 aa2.02□□□□□ -2.09
CUP1-1YHR053C YDR209CQ03480 137 aa2.02□□□□□ -2.09
CUP1-1YHR053C COX20Q04935 205 aa2.02□□□□□ -2.09
CUP1-1YHR053C OM45P16547 393 aa2.01□□□□□ -2.09
CUP1-1YHR053C JEN1P36035 616 aa2□□□□□ -2.09
CUP1-1YHR053C MRPL39P36533 70 aa2□□□□□ -2.09
CUP1-1YHR053C MRH4P53166 561 aa2□□□□□ -2.09
CUP1-1YHR053C YGL034CP53186 121 aa2□□□□□ -2.09
CUP1-1YHR053C YGR026WP53217 278 aa2□□□□□ -2.09
CUP1-1YHR053C MPP6P53725 186 aaPredicted RBP2□□□□□ -2.09
CUP1-1YHR053C YMR279CQ03263 540 aa2□□□□□ -2.09
CUP1-1YHR053C SYC1Q08553 188 aaPredicted RBP2□□□□□ -2.09
CUP1-1YHR053C SWI1P09547 1314 aa1.99□□□□□ -2.09
CUP1-1YHR053C YLR462WO13556 202 aa1.99□□□□□ -2.09
CUP1-1YHR053C Q0255P03881 472 aa1.99□□□□□ -2.09
CUP1-1YHR053C YHR032W-AP0C5N6 59 aa1.99□□□□□ -2.09
CUP1-1YHR053C YKR104WP0CE69 306 aa1.99□□□□□ -2.09
CUP1-1YHR053C YEL075CP39972 122 aa1.99□□□□□ -2.09
CUP1-1YHR053C LSM4P40070 187 aaKnown RBP1.99□□□□□ -2.09
CUP1-1YHR053C SNZ3P43545 298 aa1.99□□□□□ -2.09
CUP1-1YHR053C YAR1P46683 200 aa1.99□□□□□ -2.09
CUP1-1YHR053C RRP40Q08285 240 aaKnown RBP1.99□□□□□ -2.09
CUP1-1YHR053C SGE1P33335 543 aa1.98□□□□□ -2.09
CUP1-1YHR053C FZO1P38297 855 aa1.98□□□□□ -2.09
CUP1-1YHR053C YHR125WP38831 101 aa1.98□□□□□ -2.09
CUP1-1YHR053C AYR1P40471 297 aa1.98□□□□□ -2.09
CUP1-1YHR053C YPR098CQ06089 161 aa1.98□□□□□ -2.09
CUP1-1YHR053C FBA1P14540 359 aaKnown RBP1.97□□□□□ -2.09
CUP1-1YHR053C POL30P15873 258 aaKnown RBP1.97□□□□□ -2.09
CUP1-1YHR053C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
CUP1-1YHR053C SMB1P40018 196 aaKnown RBP1.97□□□□□ -2.09
CUP1-1YHR053C RTT105P40063 208 aa1.97□□□□□ -2.09
CUP1-1YHR053C SPG4Q04438 115 aa1.97□□□□□ -2.09
CUP1-1YHR053C FAR8Q05040 523 aa1.97□□□□□ -2.09
CUP1-1YHR053C COQ10Q08058 207 aa1.97□□□□□ -2.09
CUP1-1YHR053C AKR2Q12013 749 aa1.97□□□□□ -2.09
CUP1-1YHR053C BTS1Q12051 335 aa1.97□□□□□ -2.09
CUP1-1YHR053C RNA15P25299 296 aaPredicted RBP1.96□□□□□ -2.1
CUP1-1YHR053C MEP1P40260 492 aa1.96□□□□□ -2.1
CUP1-1YHR053C USE1P53146 245 aa1.96□□□□□ -2.1
CUP1-1YHR053C ATO3Q12359 275 aa1.96□□□□□ -2.1
CUP1-1YHR053C PEX4P29340 183 aa1.95□□□□□ -2.1
CUP1-1YHR053C HOM6P31116 359 aaKnown RBP1.95□□□□□ -2.1
CUP1-1YHR053C ERG24P32462 438 aaKnown RBP1.95□□□□□ -2.1
CUP1-1YHR053C VMA11P32842 164 aa1.95□□□□□ -2.1
CUP1-1YHR053C MSA2P36157 363 aa1.95□□□□□ -2.1
CUP1-1YHR053C MRX3P38172 270 aa1.95□□□□□ -2.1
CUP1-1YHR053C THO1P40040 218 aaKnown RBP1.95□□□□□ -2.1
CUP1-1YHR053C RRS1Q08746 203 aaKnown RBP1.95□□□□□ -2.1
CUP1-1YHR053C PEP8P40335 379 aa1.94□□□□□ -2.1
CUP1-1YHR053C SMD3P43321 101 aaKnown RBP1.94□□□□□ -2.1
CUP1-1YHR053C RMR1P53060 241 aa1.94□□□□□ -2.1
CUP1-1YHR053C YGL159WP53110 370 aa1.94□□□□□ -2.1
CUP1-1YHR053C SNZ2P53824 298 aa1.94□□□□□ -2.1
CUP1-1YHR053C YLR030WQ07967 263 aa1.94□□□□□ -2.1
CUP1-1YHR053C SNU23Q12368 194 aaPredicted RBP1.94□□□□□ -2.1
CUP1-1YHR053C COX5AP00424 153 aa1.93□□□□□ -2.1
CUP1-1YHR053C GOS1P38736 223 aa1.93□□□□□ -2.1
CUP1-1YHR053C DOG1P38774 246 aa1.93□□□□□ -2.1
CUP1-1YHR053C FIS1P40515 155 aa1.93□□□□□ -2.1
CUP1-1YHR053C CIS3P47001 227 aa1.93□□□□□ -2.1
CUP1-1YHR053C GTR2P53290 341 aa1.93□□□□□ -2.1
CUP1-1YHR053C RHO3Q00245 231 aaKnown RBP1.93□□□□□ -2.1
CUP1-1YHR053C MRPS8Q03799 155 aa1.93□□□□□ -2.1
CUP1-1YHR053C YOR186WQ08560 144 aa1.93□□□□□ -2.1
CUP1-1YHR053C YPL257WQ08974 193 aa1.93□□□□□ -2.1
CUP1-1YHR053C SCL1P21243 252 aaKnown RBP1.92□□□□□ -2.1
CUP1-1YHR053C EHD3P28817 500 aa1.92□□□□□ -2.1
CUP1-1YHR053C MDH3P32419 343 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
CUP1-1YHR053C BIG1P38813 335 aa1.92□□□□□ -2.1
CUP1-1YHR053C ERG25P53045 309 aa1.92□□□□□ -2.1
CUP1-1YHR053C YGR219WP53307 113 aa1.92□□□□□ -2.1
CUP1-1YHR053C INM2Q05533 292 aa1.92□□□□□ -2.1
CUP1-1YHR053C SDO1Q07953 250 aaKnown RBP1.92□□□□□ -2.1
CUP1-1YHR053C IPP1P00817 287 aaKnown RBP1.91□□□□□ -2.1
CUP1-1YHR053C RPL9AP05738 191 aaKnown RBP1.91□□□□□ -2.1
CUP1-1YHR053C MSF1P08425 469 aa1.91□□□□□ -2.1
CUP1-1YHR053C DSF1P0CX08 502 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 62.1 ms