RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W TDH3P00359 332 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
VPS41YDR080W RPS16AP0CX51 143 aaKnown RBP2.05□□□□□ -2.08
VPS41YDR080W RPS16BP0CX52 143 aaKnown RBP2.05□□□□□ -2.08
VPS41YDR080W PET9P18239 318 aaKnown RBP2.05□□□□□ -2.08
VPS41YDR080W YBL029WP38201 376 aa2.05□□□□□ -2.08
VPS41YDR080W ECM8P38246 354 aa2.05□□□□□ -2.08
VPS41YDR080W RBG1P39729 369 aa2.05□□□□□ -2.08
VPS41YDR080W DPB4Q04603 196 aaKnown RBP2.05□□□□□ -2.08
VPS41YDR080W YPR098CQ06089 161 aa2.05□□□□□ -2.08
VPS41YDR080W MRPL51Q06090 140 aaPredicted RBP2.05□□□□□ -2.08
VPS41YDR080W NSL1Q12143 216 aa2.05□□□□□ -2.08
VPS41YDR080W RAD7P06779 565 aa2.04□□□□□ -2.08
VPS41YDR080W MIG1P27705 504 aa2.04□□□□□ -2.08
VPS41YDR080W PAD1P33751 242 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
VPS41YDR080W NUF2P33895 451 aa2.04□□□□□ -2.08
VPS41YDR080W MRPL17P36528 281 aa2.04□□□□□ -2.08
VPS41YDR080W ECM31P38122 312 aa2.04□□□□□ -2.08
VPS41YDR080W YBR032WP38223 100 aa2.04□□□□□ -2.08
VPS41YDR080W RGI1P40043 161 aaPredicted RBP2.04□□□□□ -2.08
VPS41YDR080W AGE2P40529 298 aa2.04□□□□□ -2.08
VPS41YDR080W TOS2P50078 622 aa2.04□□□□□ -2.08
VPS41YDR080W DIG2Q03373 323 aaKnown RBP2.04□□□□□ -2.08
VPS41YDR080W ARR2Q06597 130 aa2.04□□□□□ -2.08
VPS41YDR080W USB1Q12208 290 aaKnown RBP2.04□□□□□ -2.08
VPS41YDR080W SCEIP03882 235 aa2.04□□□□□ -2.08
VPS41YDR080W MSW1P04803 379 aa2.04□□□□□ -2.08
VPS41YDR080W MRPS28P21771 286 aa2.04□□□□□ -2.08
VPS41YDR080W TOM40P23644 387 aaKnown RBP2.04□□□□□ -2.08
VPS41YDR080W GLC7P32598 312 aaKnown RBP2.04□□□□□ -2.08
VPS41YDR080W VPS17P32913 551 aa2.04□□□□□ -2.08
VPS41YDR080W LHP1P33399 275 aaKnown RBP2.04□□□□□ -2.08
VPS41YDR080W YJL213WP40896 331 aa2.04□□□□□ -2.08
VPS41YDR080W GCN20P43535 752 aaKnown RBP2.04□□□□□ -2.08
VPS41YDR080W YJL055WP47044 245 aa2.04□□□□□ -2.08
VPS41YDR080W XPT1P47165 209 aa2.04□□□□□ -2.08
VPS41YDR080W GPI8P49018 411 aa2.04□□□□□ -2.08
VPS41YDR080W CTS2Q06350 511 aa2.04□□□□□ -2.08
VPS41YDR080W LUC7Q07508 261 aaPredicted RBP2.04□□□□□ -2.08
VPS41YDR080W MIM1Q08176 113 aa2.04□□□□□ -2.08
VPS41YDR080W MED2Q12124 431 aa2.04□□□□□ -2.08
VPS41YDR080W WTM1Q12363 437 aaKnown RBP2.04□□□□□ -2.08
VPS41YDR080W MRX4Q12467 430 aa2.04□□□□□ -2.08
VPS41YDR080W MF(ALPHA)1P01149 165 aa2.04□□□□□ -2.08
VPS41YDR080W DPM1P14020 267 aaKnown RBP2.04□□□□□ -2.08
VPS41YDR080W SUR1P33300 382 aa2.04□□□□□ -2.08
VPS41YDR080W MET28P40573 187 aa2.04□□□□□ -2.08
VPS41YDR080W CIN2P46670 268 aa2.04□□□□□ -2.08
VPS41YDR080W HHT1P61830 136 aa2.04□□□□□ -2.08
VPS41YDR080W YMR010WQ03687 405 aa2.04□□□□□ -2.08
VPS41YDR080W ECM18Q04623 453 aa2.04□□□□□ -2.08
VPS41YDR080W IRC25Q07951 179 aa2.04□□□□□ -2.08
VPS41YDR080W RFU1Q08003 200 aa2.04□□□□□ -2.08
VPS41YDR080W THP3Q12049 470 aaKnown RBP2.04□□□□□ -2.08
VPS41YDR080W HMS1Q12398 434 aa2.04□□□□□ -2.08
VPS41YDR080W YER078W-AQ3E7A2 54 aa2.04□□□□□ -2.08
VPS41YDR080W ATP6P00854 259 aa2.03□□□□□ -2.08
VPS41YDR080W BNA7Q04066 261 aa2.03□□□□□ -2.08
VPS41YDR080W KRE28Q04431 385 aa2.03□□□□□ -2.08
VPS41YDR080W MCT1Q12283 360 aa2.03□□□□□ -2.08
VPS41YDR080W NCA2Q12374 616 aa2.03□□□□□ -2.08
VPS41YDR080W YCL021W-AQ96VH3 125 aa2.03□□□□□ -2.08
VPS41YDR080W DSF1P0CX08 502 aa2.03□□□□□ -2.08
VPS41YDR080W YNR073CP0CX09 502 aa2.03□□□□□ -2.08
VPS41YDR080W NAM2P11325 894 aa2.03□□□□□ -2.08
VPS41YDR080W YCR051WP25631 222 aa2.03□□□□□ -2.08
VPS41YDR080W REC114P32841 428 aa2.03□□□□□ -2.08
VPS41YDR080W MDL1P33310 695 aa2.03□□□□□ -2.08
VPS41YDR080W BAT2P47176 376 aaKnown RBP2.03□□□□□ -2.08
VPS41YDR080W MRM2P53123 320 aa2.03□□□□□ -2.08
VPS41YDR080W YGL101WP53144 215 aa2.03□□□□□ -2.08
VPS41YDR080W DCI1Q08558 271 aa2.03□□□□□ -2.08
VPS41YDR080W MHF2Q3E829 80 aa2.03□□□□□ -2.08
VPS41YDR080W SPS4P09937 338 aa2.02□□□□□ -2.09
VPS41YDR080W RER1P25560 188 aa2.02□□□□□ -2.09
VPS41YDR080W DEG1P31115 442 aaKnown RBP2.02□□□□□ -2.09
VPS41YDR080W SDH4P37298 181 aa2.02□□□□□ -2.09
VPS41YDR080W YPI1P43587 155 aa2.02□□□□□ -2.09
VPS41YDR080W YNR062CP53748 327 aa2.02□□□□□ -2.09
VPS41YDR080W DML1Q03652 475 aa2.02□□□□□ -2.09
VPS41YDR080W RPL39P04650 51 aa2.02□□□□□ -2.09
VPS41YDR080W BGL2P15703 313 aaKnown RBP2.02□□□□□ -2.09
VPS41YDR080W VMA16P23968 213 aa2.02□□□□□ -2.09
VPS41YDR080W ATP7P30902 174 aa2.02□□□□□ -2.09
VPS41YDR080W GDH2P33327 1092 aaKnown RBP2.02□□□□□ -2.09
VPS41YDR080W YBR144CP34215 104 aa2.02□□□□□ -2.09
VPS41YDR080W IST2P38250 946 aa2.02□□□□□ -2.09
VPS41YDR080W RPA43P46669 326 aa2.02□□□□□ -2.09
VPS41YDR080W REX2P54964 269 aaKnown RBP2.02□□□□□ -2.09
VPS41YDR080W YPL067CQ02754 198 aa2.02□□□□□ -2.09
VPS41YDR080W YPL077CQ02831 240 aa2.02□□□□□ -2.09
VPS41YDR080W YDR102CQ03864 110 aa2.02□□□□□ -2.09
VPS41YDR080W FAR8Q05040 523 aa2.02□□□□□ -2.09
VPS41YDR080W SLF1Q12034 447 aaKnown RBP2.02□□□□□ -2.09
VPS41YDR080W YDL009CQ12210 107 aa2.02□□□□□ -2.09
VPS41YDR080W BPH1P25356 2167 aa2.01□□□□□ -2.09
VPS41YDR080W EXO70P19658 623 aa2.01□□□□□ -2.09
VPS41YDR080W HXT2P23585 541 aa2.01□□□□□ -2.09
VPS41YDR080W PUT3P25502 979 aaPredicted RBP2.01□□□□□ -2.09
VPS41YDR080W UTR5P32630 166 aa2.01□□□□□ -2.09
VPS41YDR080W RIB1P38066 345 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms