RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W YKE4P40544 346 aa1.19□□□□□ -2.22
CDC36YDL165W TIR3P40552 269 aa1.19□□□□□ -2.22
CDC36YDL165W SSU1P41930 458 aa1.19□□□□□ -2.22
CDC36YDL165W HIT1P46973 164 aa1.19□□□□□ -2.22
CDC36YDL165W MRX5P47007 382 aa1.19□□□□□ -2.22
CDC36YDL165W IRC18P47056 224 aa1.19□□□□□ -2.22
CDC36YDL165W EFM3P47163 339 aa1.19□□□□□ -2.22
CDC36YDL165W SNN1P48232 102 aa1.19□□□□□ -2.22
CDC36YDL165W TRM9P49957 279 aa1.19□□□□□ -2.22
CDC36YDL165W BIO3P50277 480 aa1.19□□□□□ -2.22
CDC36YDL165W PDR10P51533 1564 aa1.19□□□□□ -2.22
CDC36YDL165W NBP35P52920 328 aa1.19□□□□□ -2.22
CDC36YDL165W YGL235WP53071 178 aa1.19□□□□□ -2.22
CDC36YDL165W TPN1P53099 579 aa1.19□□□□□ -2.22
CDC36YDL165W FLC3P53121 802 aa1.19□□□□□ -2.22
CDC36YDL165W USE1P53146 245 aa1.19□□□□□ -2.22
CDC36YDL165W PNC1P53184 216 aaKnown RBP1.19□□□□□ -2.22
CDC36YDL165W POP6P53218 158 aa1.19□□□□□ -2.22
CDC36YDL165W YIP3P53633 176 aa1.19□□□□□ -2.22
CDC36YDL165W YNL260CP53846 198 aa1.19□□□□□ -2.22
CDC36YDL165W AQR1P53943 586 aa1.19□□□□□ -2.22
CDC36YDL165W OCA2P53949 197 aa1.19□□□□□ -2.22
CDC36YDL165W YDR366CP87287 132 aa1.19□□□□□ -2.22
CDC36YDL165W NUP49Q02199 472 aa1.19□□□□□ -2.22
CDC36YDL165W ODC1Q03028 310 aa1.19□□□□□ -2.22
CDC36YDL165W SNO1Q03144 224 aa1.19□□□□□ -2.22
CDC36YDL165W TMA23Q03525 211 aa1.19□□□□□ -2.22
CDC36YDL165W CGI121Q03705 181 aaKnown RBP1.19□□□□□ -2.22
CDC36YDL165W YET2Q04210 160 aa1.19□□□□□ -2.22
CDC36YDL165W TVP18Q04767 167 aa1.19□□□□□ -2.22
CDC36YDL165W RRP45Q05636 305 aaKnown RBP1.19□□□□□ -2.22
CDC36YDL165W ATG39Q06159 398 aa1.19□□□□□ -2.22
CDC36YDL165W RIF2Q06208 395 aa1.19□□□□□ -2.22
CDC36YDL165W CTS2Q06350 511 aa1.19□□□□□ -2.22
CDC36YDL165W PML1Q07930 204 aaPredicted RBP1.19□□□□□ -2.22
CDC36YDL165W THP1Q08231 455 aa1.19□□□□□ -2.22
CDC36YDL165W YOR365CQ08844 703 aa1.19□□□□□ -2.22
CDC36YDL165W SCP1Q08873 200 aa1.19□□□□□ -2.22
CDC36YDL165W GPM2Q12008 311 aa1.19□□□□□ -2.22
CDC36YDL165W YOR283WQ12040 230 aaKnown RBP1.19□□□□□ -2.22
CDC36YDL165W FCY22Q12119 530 aa1.19□□□□□ -2.22
CDC36YDL165W NMD4Q12129 218 aa1.19□□□□□ -2.22
CDC36YDL165W PER33Q12144 273 aa1.19□□□□□ -2.22
CDC36YDL165W POM33Q12164 279 aa1.19□□□□□ -2.22
CDC36YDL165W MDM32Q12171 622 aa1.19□□□□□ -2.22
CDC36YDL165W PKH2Q12236 1081 aaKnown RBP1.19□□□□□ -2.22
CDC36YDL165W TPT1Q12272 230 aaKnown RBP1.19□□□□□ -2.22
CDC36YDL165W GPM3Q12326 303 aa1.19□□□□□ -2.22
CDC36YDL165W JLP1Q12358 412 aa1.19□□□□□ -2.22
CDC36YDL165W YDL199CQ12407 687 aa1.19□□□□□ -2.22
CDC36YDL165W TFC7Q12415 435 aa1.19□□□□□ -2.22
CDC36YDL165W RTN2Q12443 393 aa1.19□□□□□ -2.22
CDC36YDL165W YPR1Q12458 312 aa1.19□□□□□ -2.22
CDC36YDL165W RRD2Q12461 358 aa1.19□□□□□ -2.22
CDC36YDL165W PRM4Q12498 284 aa1.19□□□□□ -2.22
CDC36YDL165W FOL3Q12676 427 aaPredicted RBP1.19□□□□□ -2.22
CDC36YDL165W YIR021W-AQ3E739 70 aa1.19□□□□□ -2.22
CDC36YDL165W YOL159C-AQ3E769 90 aa1.19□□□□□ -2.22
CDC36YDL165W COA6Q3E846 104 aa1.19□□□□□ -2.22
CDC36YDL165W DNA2P38859 1522 aa1.19□□□□□ -2.22
CDC36YDL165W SSK2P53599 1579 aa1.18□□□□□ -2.22
CDC36YDL165W SAL1D6W196 494 aa1.18□□□□□ -2.22
CDC36YDL165W THP2O13539 261 aaKnown RBP1.18□□□□□ -2.22
CDC36YDL165W VPS63O13549 108 aa1.18□□□□□ -2.22
CDC36YDL165W CYC3P06182 269 aa1.18□□□□□ -2.22
CDC36YDL165W CDC33P07260 213 aaKnown RBP1.18□□□□□ -2.22
CDC36YDL165W DDI2P0CH63 225 aa1.18□□□□□ -2.22
CDC36YDL165W DDI3P0CH64 225 aa1.18□□□□□ -2.22
CDC36YDL165W DPM1P14020 267 aaKnown RBP1.18□□□□□ -2.22
CDC36YDL165W GRX2P17695 143 aaKnown RBP1.18□□□□□ -2.22
CDC36YDL165W ATP10P18496 279 aa1.18□□□□□ -2.22
CDC36YDL165W ANB1P19211 157 aa1.18□□□□□ -2.22
CDC36YDL165W EXO70P19658 623 aa1.18□□□□□ -2.22
CDC36YDL165W SAG1P20840 650 aa1.18□□□□□ -2.22
CDC36YDL165W MAG1P22134 296 aaKnown RBP1.18□□□□□ -2.22
CDC36YDL165W SEC22P22214 214 aa1.18□□□□□ -2.22
CDC36YDL165W DAL2P25335 343 aa1.18□□□□□ -2.22
CDC36YDL165W EHD3P28817 500 aa1.18□□□□□ -2.22
CDC36YDL165W PEX4P29340 183 aa1.18□□□□□ -2.22
CDC36YDL165W BEM1P29366 551 aa1.18□□□□□ -2.22
CDC36YDL165W TRR1P29509 319 aaKnown RBP1.18□□□□□ -2.22
CDC36YDL165W OCH1P31755 480 aa1.18□□□□□ -2.22
CDC36YDL165W CYS4P32582 507 aaKnown RBP1.18□□□□□ -2.22
CDC36YDL165W SEC17P32602 292 aa1.18□□□□□ -2.22
CDC36YDL165W RML2P32611 393 aa1.18□□□□□ -2.22
CDC36YDL165W PDC2P32896 925 aa1.18□□□□□ -2.22
CDC36YDL165W SKG6P32900 734 aaPredicted RBP1.18□□□□□ -2.22
CDC36YDL165W ECT1P33412 323 aa1.18□□□□□ -2.22
CDC36YDL165W YET1P35723 206 aa1.18□□□□□ -2.22
CDC36YDL165W PRY2P36110 329 aa1.18□□□□□ -2.22
CDC36YDL165W PDX3P38075 228 aaKnown RBP1.18□□□□□ -2.22
CDC36YDL165W ADH5P38113 351 aaKnown RBP1.18□□□□□ -2.22
CDC36YDL165W VID24P38263 362 aa1.18□□□□□ -2.22
CDC36YDL165W YPC1P38298 316 aa1.18□□□□□ -2.22
CDC36YDL165W MBA1P38300 278 aa1.18□□□□□ -2.22
CDC36YDL165W YBR285WP38354 144 aa1.18□□□□□ -2.22
CDC36YDL165W RCK1P38622 512 aa1.18□□□□□ -2.22
CDC36YDL165W HIS2P38635 335 aa1.18□□□□□ -2.22
CDC36YDL165W PRS3P38689 320 aaKnown RBP1.18□□□□□ -2.22
CDC36YDL165W YHL044WP38727 235 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms