RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W KAP114P53067 1004 aa3.67□□□□□ -1.82
CKS1YBR135W YNL040WP53960 456 aaPredicted RBP3.67□□□□□ -1.82
CKS1YBR135W ECM11Q04110 302 aa3.67□□□□□ -1.82
CKS1YBR135W VBA1Q04301 562 aa3.67□□□□□ -1.82
CKS1YBR135W DPP1Q05521 289 aa3.67□□□□□ -1.82
CKS1YBR135W BTS1Q12051 335 aa3.67□□□□□ -1.82
CKS1YBR135W COX10P21592 462 aa3.66□□□□□ -1.82
CKS1YBR135W FRM2P37261 193 aa3.66□□□□□ -1.82
CKS1YBR135W MRX3P38172 270 aa3.66□□□□□ -1.82
CKS1YBR135W FMC1P40491 155 aa3.66□□□□□ -1.82
CKS1YBR135W BNA6P43619 295 aa3.66□□□□□ -1.82
CKS1YBR135W HSH155P49955 971 aaKnown RBP3.66□□□□□ -1.82
CKS1YBR135W TPN1P53099 579 aa3.66□□□□□ -1.82
CKS1YBR135W CPD1P53314 239 aa3.66□□□□□ -1.82
CKS1YBR135W ALG11P53954 548 aaKnown RBP3.66□□□□□ -1.82
CKS1YBR135W RNY1Q02933 434 aaKnown RBP3.66□□□□□ -1.82
CKS1YBR135W SRL4Q03085 281 aa3.66□□□□□ -1.82
CKS1YBR135W CMC2Q3E7A4 109 aa3.66□□□□□ -1.82
CKS1YBR135W COX2P00410 251 aa3.65□□□□□ -1.83
CKS1YBR135W RSA4P25382 515 aaKnown RBP3.65□□□□□ -1.83
CKS1YBR135W RPB9P27999 122 aa3.65□□□□□ -1.83
CKS1YBR135W AIM29P36154 155 aa3.65□□□□□ -1.83
CKS1YBR135W MBA1P38300 278 aa3.65□□□□□ -1.83
CKS1YBR135W MTW1P39731 289 aa3.65□□□□□ -1.83
CKS1YBR135W YER184CP39961 794 aa3.65□□□□□ -1.83
CKS1YBR135W ACT1P60010 375 aaKnown RBP3.65□□□□□ -1.83
CKS1YBR135W YMR209CQ03648 457 aa3.65□□□□□ -1.83
CKS1YBR135W COX20Q04935 205 aa3.65□□□□□ -1.83
CKS1YBR135W ARR2Q06597 130 aa3.65□□□□□ -1.83
CKS1YBR135W HAP2P06774 265 aa3.64□□□□□ -1.83
CKS1YBR135W YCR025CP25352 136 aa3.64□□□□□ -1.83
CKS1YBR135W BMH1P29311 267 aaKnown RBP3.64□□□□□ -1.83
CKS1YBR135W MRPL6P32904 214 aa3.64□□□□□ -1.83
CKS1YBR135W FRT2P39734 528 aa3.64□□□□□ -1.83
CKS1YBR135W COA1P40452 197 aa3.64□□□□□ -1.83
CKS1YBR135W MOB1P40484 314 aa3.64□□□□□ -1.83
CKS1YBR135W YAR1P46683 200 aa3.64□□□□□ -1.83
CKS1YBR135W IBA57P47158 497 aa3.64□□□□□ -1.83
CKS1YBR135W FLC3P53121 802 aa3.64□□□□□ -1.83
CKS1YBR135W YGL118CP53132 145 aa3.64□□□□□ -1.83
CKS1YBR135W YML018CQ03730 393 aa3.64□□□□□ -1.83
CKS1YBR135W YOS9Q99220 542 aa3.64□□□□□ -1.83
CKS1YBR135W YLR422WQ06409 1932 aa3.64□□□□□ -1.83
CKS1YBR135W PET494P07390 489 aaPredicted RBP3.63□□□□□ -1.83
CKS1YBR135W MET16P18408 261 aaPredicted RBP3.63□□□□□ -1.83
CKS1YBR135W YPK2P18961 677 aa3.63□□□□□ -1.83
CKS1YBR135W HMT1P38074 348 aa3.63□□□□□ -1.83
CKS1YBR135W MAL32P38158 584 aa3.63□□□□□ -1.83
CKS1YBR135W PRM9P39551 298 aa3.63□□□□□ -1.83
CKS1YBR135W BDH1P39714 382 aa3.63□□□□□ -1.83
CKS1YBR135W YIL054WP40524 105 aa3.63□□□□□ -1.83
CKS1YBR135W YFL064CP43540 174 aa3.63□□□□□ -1.83
CKS1YBR135W MAL12P53341 584 aa3.63□□□□□ -1.83
CKS1YBR135W CDC14Q00684 551 aa3.63□□□□□ -1.83
CKS1YBR135W RRP17Q04031 235 aaPredicted RBP3.63□□□□□ -1.83
CKS1YBR135W BNA7Q04066 261 aa3.63□□□□□ -1.83
CKS1YBR135W TAF9Q05027 157 aa3.63□□□□□ -1.83
CKS1YBR135W BRX1Q08235 291 aaKnown RBP3.63□□□□□ -1.83
CKS1YBR135W YPL278CQ08990 100 aa3.63□□□□□ -1.83
CKS1YBR135W GET4Q12125 312 aa3.63□□□□□ -1.83
CKS1YBR135W YAL063C-AQ3E791 96 aa3.63□□□□□ -1.83
CKS1YBR135W RPL22AP05749 121 aaKnown RBP3.62□□□□□ -1.83
CKS1YBR135W RPL4AP10664 362 aaKnown RBP3.62□□□□□ -1.83
CKS1YBR135W APA2P22108 325 aa3.62□□□□□ -1.83
CKS1YBR135W ZIP1P31111 875 aa3.62□□□□□ -1.83
CKS1YBR135W MRPL3P36516 390 aa3.62□□□□□ -1.83
CKS1YBR135W ASP1P38986 381 aaPredicted RBP3.62□□□□□ -1.83
CKS1YBR135W NPT1P39683 429 aaKnown RBP3.62□□□□□ -1.83
CKS1YBR135W EDC2P40023 145 aaPredicted RBP3.62□□□□□ -1.83
CKS1YBR135W YJL118WP47022 219 aa3.62□□□□□ -1.83
CKS1YBR135W HAM1P47119 197 aaKnown RBP3.62□□□□□ -1.83
CKS1YBR135W RPL4BP49626 362 aaKnown RBP3.62□□□□□ -1.83
CKS1YBR135W NBP1P52919 319 aaPredicted RBP3.62□□□□□ -1.83
CKS1YBR135W RMR1P53060 241 aa3.62□□□□□ -1.83
CKS1YBR135W NOP13P53883 403 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
CKS1YBR135W GIM5Q04493 163 aa3.62□□□□□ -1.83
CKS1YBR135W MRX8Q05473 314 aa3.62□□□□□ -1.83
CKS1YBR135W CTS2Q06350 511 aa3.62□□□□□ -1.83
CKS1YBR135W RPS3P05750 240 aaKnown RBP3.61□□□□□ -1.83
CKS1YBR135W POL30P15873 258 aaKnown RBP3.61□□□□□ -1.83
CKS1YBR135W POF1P25576 258 aa3.61□□□□□ -1.83
CKS1YBR135W ATG15P25641 520 aa3.61□□□□□ -1.83
CKS1YBR135W CWP1P28319 239 aa3.61□□□□□ -1.83
CKS1YBR135W CSE1P33307 960 aa3.61□□□□□ -1.83
CKS1YBR135W GDH2P33327 1092 aaKnown RBP3.61□□□□□ -1.83
CKS1YBR135W PEX31P53203 462 aa3.61□□□□□ -1.83
CKS1YBR135W TIM8P57744 87 aa3.61□□□□□ -1.83
CKS1YBR135W SMD1Q02260 146 aaPredicted RBP3.61□□□□□ -1.83
CKS1YBR135W SFH1Q06168 426 aa3.61□□□□□ -1.83
CKS1YBR135W YDL211CQ12121 372 aa3.61□□□□□ -1.83
CKS1YBR135W CCH1P50077 2039 aa3.6□□□□□ -1.83
CKS1YBR135W MSF1P08425 469 aa3.6□□□□□ -1.83
CKS1YBR135W MRP1P10662 321 aaKnown RBP3.6□□□□□ -1.83
CKS1YBR135W MAK5P38112 773 aaPredicted RBP3.6□□□□□ -1.83
CKS1YBR135W ATG12P38316 186 aa3.6□□□□□ -1.83
CKS1YBR135W TRR2P38816 342 aa3.6□□□□□ -1.83
CKS1YBR135W KRE29P40026 464 aa3.6□□□□□ -1.83
CKS1YBR135W YIL012WP40551 113 aa3.6□□□□□ -1.83
CKS1YBR135W CAX4P53223 239 aa3.6□□□□□ -1.83
CKS1YBR135W YPL113CQ02961 396 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms