RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W BNA7Q04066 261 aa3.01□□□□□ -1.93
NUP60YAR002W YLR456WQ06199 204 aa3.01□□□□□ -1.93
NUP60YAR002W FRE3Q08905 711 aa3.01□□□□□ -1.93
NUP60YAR002W YRA1Q12159 226 aaKnown RBP3.01□□□□□ -1.93
NUP60YAR002W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
NUP60YAR002W RDI1Q12434 202 aa3.01□□□□□ -1.93
NUP60YAR002W FMP16Q12497 93 aa3.01□□□□□ -1.93
NUP60YAR002W FSH3Q99369 266 aa3.01□□□□□ -1.93
NUP60YAR002W COX1P00401 534 aa3.01□□□□□ -1.93
NUP60YAR002W CHO1P08456 276 aa3.01□□□□□ -1.93
NUP60YAR002W MATALPHA1P0CY06 175 aa3.01□□□□□ -1.93
NUP60YAR002W HMLALPHA1P0CY07 175 aa3.01□□□□□ -1.93
NUP60YAR002W HOM3P10869 527 aa3.01□□□□□ -1.93
NUP60YAR002W STE18P18852 110 aa3.01□□□□□ -1.93
NUP60YAR002W UTR1P21373 530 aa3.01□□□□□ -1.93
NUP60YAR002W SCO1P23833 295 aa3.01□□□□□ -1.93
NUP60YAR002W MEK1P24719 497 aaPredicted RBP3.01□□□□□ -1.93
NUP60YAR002W YCR016WP25617 290 aaKnown RBP3.01□□□□□ -1.93
NUP60YAR002W NAM9P27929 486 aa3.01□□□□□ -1.93
NUP60YAR002W EHD3P28817 500 aa3.01□□□□□ -1.93
NUP60YAR002W ACB1P31787 87 aa3.01□□□□□ -1.93
NUP60YAR002W RPC34P32910 317 aa3.01□□□□□ -1.93
NUP60YAR002W ECM27P47144 725 aa3.01□□□□□ -1.93
NUP60YAR002W YIP4P53093 235 aa3.01□□□□□ -1.93
NUP60YAR002W YGR042WP53227 271 aa3.01□□□□□ -1.93
NUP60YAR002W MTM1P53320 366 aa3.01□□□□□ -1.93
NUP60YAR002W NRM1P53718 249 aa3.01□□□□□ -1.93
NUP60YAR002W CTF19Q02732 369 aa3.01□□□□□ -1.93
NUP60YAR002W PET191Q02772 108 aa3.01□□□□□ -1.93
NUP60YAR002W VBA1Q04301 562 aa3.01□□□□□ -1.93
NUP60YAR002W YPR147CQ06522 304 aaKnown RBP3.01□□□□□ -1.93
NUP60YAR002W YLR031WQ07978 186 aa3.01□□□□□ -1.93
NUP60YAR002W MIM1Q08176 113 aa3.01□□□□□ -1.93
NUP60YAR002W SYC1Q08553 188 aaPredicted RBP3.01□□□□□ -1.93
NUP60YAR002W HNT3Q08702 217 aa3.01□□□□□ -1.93
NUP60YAR002W TMS1Q12116 473 aa3.01□□□□□ -1.93
NUP60YAR002W FRE7Q12333 620 aa3.01□□□□□ -1.93
NUP60YAR002W ORT1Q12375 292 aa3.01□□□□□ -1.93
NUP60YAR002W ATG31Q12421 196 aa3.01□□□□□ -1.93
NUP60YAR002W YIL046W-AQ3E7Z4 54 aa3.01□□□□□ -1.93
NUP60YAR002W POL2P21951 2222 aaKnown RBP3□□□□□ -1.93
NUP60YAR002W TDH2P00358 332 aaKnown RBP3□□□□□ -1.93
NUP60YAR002W ARG80P07249 177 aa3□□□□□ -1.93
NUP60YAR002W RPL3P14126 387 aaKnown RBP3□□□□□ -1.93
NUP60YAR002W SEN2P16658 377 aa3□□□□□ -1.93
NUP60YAR002W STE4P18851 423 aa3□□□□□ -1.93
NUP60YAR002W CKS1P20486 150 aaKnown RBP3□□□□□ -1.93
NUP60YAR002W DBF20P32328 564 aa3□□□□□ -1.93
NUP60YAR002W PDR3P33200 976 aa3□□□□□ -1.93
NUP60YAR002W SNC2P33328 115 aa3□□□□□ -1.93
NUP60YAR002W WBP1P33767 430 aaKnown RBP3□□□□□ -1.93
NUP60YAR002W SSH1P38353 490 aaKnown RBP3□□□□□ -1.93
NUP60YAR002W YIL060WP40519 144 aa3□□□□□ -1.93
NUP60YAR002W RMD9P53140 646 aaKnown RBP3□□□□□ -1.93
NUP60YAR002W YGR126WP53274 230 aa3□□□□□ -1.93
NUP60YAR002W SCW4P53334 386 aaKnown RBP3□□□□□ -1.93
NUP60YAR002W YLR152CP54072 576 aa3□□□□□ -1.93
NUP60YAR002W BUD25P85052 153 aa3□□□□□ -1.93
NUP60YAR002W PEX25Q02969 394 aa3□□□□□ -1.93
NUP60YAR002W YDR249CQ03787 373 aa3□□□□□ -1.93
NUP60YAR002W YLR352WQ06479 807 aa3□□□□□ -1.93
NUP60YAR002W YOR385WQ08909 290 aa3□□□□□ -1.93
NUP60YAR002W TGS1Q12052 315 aa3□□□□□ -1.93
NUP60YAR002W HMS1Q12398 434 aa3□□□□□ -1.93
NUP60YAR002W CYR1P08678 2026 aaKnown RBP2.99□□□□□ -1.93
NUP60YAR002W MSW1P04803 379 aa2.99□□□□□ -1.93
NUP60YAR002W PRB1P09232 635 aa2.99□□□□□ -1.93
NUP60YAR002W DSF1P0CX08 502 aa2.99□□□□□ -1.93
NUP60YAR002W YNR073CP0CX09 502 aa2.99□□□□□ -1.93
NUP60YAR002W CTA1P15202 515 aa2.99□□□□□ -1.93
NUP60YAR002W URA6P15700 204 aa2.99□□□□□ -1.93
NUP60YAR002W PET18P25362 215 aa2.99□□□□□ -1.93
NUP60YAR002W KRR1P25586 316 aaPredicted RBP2.99□□□□□ -1.93
NUP60YAR002W MRP17P28778 131 aa2.99□□□□□ -1.93
NUP60YAR002W FRM2P37261 193 aa2.99□□□□□ -1.93
NUP60YAR002W LEU5P38702 357 aa2.99□□□□□ -1.93
NUP60YAR002W GEP4P38812 185 aa2.99□□□□□ -1.93
NUP60YAR002W YER010CP40011 234 aa2.99□□□□□ -1.93
NUP60YAR002W SWM2P40342 146 aa2.99□□□□□ -1.93
NUP60YAR002W DLS1P40366 167 aa2.99□□□□□ -1.93
NUP60YAR002W AVT7P40501 490 aa2.99□□□□□ -1.93
NUP60YAR002W TIR3P40552 269 aa2.99□□□□□ -1.93
NUP60YAR002W CUP9P41817 306 aa2.99□□□□□ -1.93
NUP60YAR002W OTU1P43558 301 aa2.99□□□□□ -1.93
NUP60YAR002W LOH1P47055 219 aa2.99□□□□□ -1.93
NUP60YAR002W GPI14P47088 403 aaKnown RBP2.99□□□□□ -1.93
NUP60YAR002W BXI1P48558 297 aa2.99□□□□□ -1.93
NUP60YAR002W POP6P53218 158 aa2.99□□□□□ -1.93
NUP60YAR002W RSM27P53305 110 aa2.99□□□□□ -1.93
NUP60YAR002W GIM3P53900 129 aa2.99□□□□□ -1.93
NUP60YAR002W SAM50P53969 484 aa2.99□□□□□ -1.93
NUP60YAR002W DID2P69771 204 aa2.99□□□□□ -1.93
NUP60YAR002W PRM15Q03262 622 aa2.99□□□□□ -1.93
NUP60YAR002W TRS23Q03784 219 aa2.99□□□□□ -1.93
NUP60YAR002W NNT1Q05874 261 aa2.99□□□□□ -1.93
NUP60YAR002W CTS2Q06350 511 aa2.99□□□□□ -1.93
NUP60YAR002W HEM25Q07534 307 aa2.99□□□□□ -1.93
NUP60YAR002W MCH4Q08268 501 aa2.99□□□□□ -1.93
NUP60YAR002W RDL2Q08742 149 aaKnown RBP2.99□□□□□ -1.93
NUP60YAR002W YOR376WQ08900 122 aa2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms