RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 ZNF564Q8TBZ8 553 aaPredicted RBP11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 EZH1Q92800 747 aaPredicted RBP11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 RXFP1Q9HBX9 757 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 HACD3Q9P035 362 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 CBX3Q13185 183 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 WDR93Q6P2C0 686 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 LRRC74BQ6ZQY2 392 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 FUKQ8N0W3 1084 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 NARS2Q96I59 477 aaKnown RBP11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 CHID1Q9BWS9 393 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 C14orf93Q9H972 538 aaKnown RBP11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 SMARCAL1Q9NZC9 954 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 HEY2Q9UBP5 337 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 BIVM-ERCC5R4GMW8 1640 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 LOC100653049A0A140TA62 436 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 KRT34O76011 436 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 NR5A1Q13285 461 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 TP53BP2Q13625 1128 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 PPP4R3CPQ6ZMV5 832 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 AHI1Q8N157 1196 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 TMEM79Q9BSE2 394 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 RNF26Q9BY78 433 aaPredicted RBP11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 PLGRKTQ9HBL7 147 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 CDYLQ9Y232 598 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 PCF11O94913 1555 aaKnown RBP11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 TRIM13O60858 407 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 RECQLP46063 649 aaPredicted RBP11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 DNAJC3Q13217 504 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 SPRTNQ9H040 489 aaPredicted RBP11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 TRIM45Q9H8W5 580 aaPredicted RBP11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 GPBP1L1Q9HC44 474 aaPredicted RBP11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 IARS2Q9NSE4 1012 aaKnown RBP11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 ABCF3Q9NUQ8 709 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 SEL1LQ9UBV2 794 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 TRIM10Q9UDY6 481 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 KIF14Q15058 1648 aa11.48□□□□□ -0.57
KCNMA1-259ENST00000639406 CALB2P22676 271 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 ARL6IP4Q66PJ3 421 aaKnown RBP11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 RNF19BQ6ZMZ0 732 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 EGFL6Q8IUX8 553 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 RNF25Q96BH1 459 aaPredicted RBP11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 CYP26B1Q9NR63 512 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 L1RE1Q9UN81 338 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 A0A1W2PQC6 194 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 ADCY6O43306 1168 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 KLHL18O94889 574 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 CYP21A2P08686 494 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 SARSP49591 514 aaKnown RBP11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 CCNHP51946 323 aaPredicted RBP11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 CYP4A11Q02928 519 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 RBBP7Q16576 425 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 P3H1Q32P28 736 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 SETD3Q86TU7 594 aaPredicted RBP11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 RHPN2Q8IUC4 686 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 PCYOX1LQ8NBM8 494 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 GDPD5Q8WTR4 605 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 OTULINQ96BN8 352 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 ARHGEF10LQ9HCE6 1279 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 NIP7Q9Y221 180 aaKnown RBP eCLIP11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 TNFRSF21O75509 655 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 PGM3O95394 542 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 TTLL1O95922 423 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 IMPDH2P12268 514 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 ITIH2P19823 946 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 LRPAP1P30533 357 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 LAMC2Q13753 1193 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 FAM83BQ5T0W9 1011 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 OR6B2Q6IFH4 312 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 STK32AQ8WU08 396 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 FAM162AQ96A26 154 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 CFAP74Q9C0B2 1584 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 ZNF556Q9HAH1 456 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 ARHGEF3Q9NR81 526 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 GINS2Q9Y248 185 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 ARHGEF10O15013 1369 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 PRCPP42785 496 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 ARSEP51690 589 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 AASDHQ4L235 1098 aaPredicted RBP11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 FASTKD1Q53R41 847 aaKnown RBP11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 BARGINQ6ZT62 677 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 BBS5Q8N3I7 341 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 TEKT3Q9BXF9 490 aa11.47□□□□□ -0.57
KCNMA1-259ENST00000639406 POTEIP0CG38 1075 aa11.46□□□□□ -0.57
KCNMA1-259ENST00000639406 NUP62P37198 522 aaPredicted RBP11.46□□□□□ -0.57
KCNMA1-259ENST00000639406 NUDT2P50583 147 aa11.46□□□□□ -0.57
KCNMA1-259ENST00000639406 TRAF2Q12933 501 aa11.46□□□□□ -0.57
KCNMA1-259ENST00000639406 TRADDQ15628 312 aa11.46□□□□□ -0.57
KCNMA1-259ENST00000639406 ILDR1Q86SU0 546 aaPredicted RBP11.46□□□□□ -0.57
KCNMA1-259ENST00000639406 COPG2Q9UBF2 871 aa11.46□□□□□ -0.57
KCNMA1-259ENST00000639406 BTN3A3O00478 584 aa11.46□□□□□ -0.57
KCNMA1-259ENST00000639406 PDE9AO76083 593 aa11.46□□□□□ -0.57
KCNMA1-259ENST00000639406 CCDC130P13994 396 aa11.46□□□□□ -0.57
KCNMA1-259ENST00000639406 ALOX12P18054 663 aa11.46□□□□□ -0.57
KCNMA1-259ENST00000639406 SOX11P35716 441 aa11.46□□□□□ -0.57
KCNMA1-259ENST00000639406 PPARGP37231 505 aaPredicted RBP11.46□□□□□ -0.57
KCNMA1-259ENST00000639406 PEX5P50542 639 aa11.46□□□□□ -0.57
KCNMA1-259ENST00000639406 PTPN12Q05209 780 aaKnown RBP11.46□□□□□ -0.57
KCNMA1-259ENST00000639406 CTTNQ14247 550 aaKnown RBP11.46□□□□□ -0.57
KCNMA1-259ENST00000639406 NR1D2Q14995 579 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms