RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 RBM46Q8TBY0 533 aaKnown RBP9.61□□□□□ -0.87
CSMD1-218ENST00000635120 RFFLQ8WZ73 363 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 WWP1Q9H0M0 922 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 STXBP3O00186 592 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 TEX33O43247 280 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 AMACRQ9UHK6 382 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 APRTP07741 180 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 NECTIN1Q15223 517 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 TRIM54Q9BYV2 358 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 TMEM260Q9NX78 707 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 FEM1BQ9UK73 627 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 ARHGAP31Q2M1Z3 1444 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 PFASO15067 1338 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 PRRC2BQ5JSZ5 2229 aaKnown RBP9.61□□□□□ -0.87
CSMD1-218ENST00000635120 ZNF185O15231 689 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 ASNSP08243 561 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 FBXW10Q5XX13 1052 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 STAG2Q8N3U4 1231 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 ARMC2Q8NEN0 867 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 SYTL2Q9HCH5 934 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 HPS4Q9NQG7 708 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 PARVAQ9NVD7 372 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 ATP11BQ9Y2G3 1177 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 ADGRG1Q9Y653 693 aa9.61□□□□□ -0.87
CSMD1-218ENST00000635120 NFX1Q12986 1120 aaKnown RBP9.6□□□□□ -0.87
CSMD1-218ENST00000635120 CCDC142Q17RM4 750 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 SPATA21Q7Z572 469 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 SCFD1Q8WVM8 642 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 RMDN1Q96DB5 314 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 MRPL4Q9BYD3 311 aaKnown RBP9.6□□□□□ -0.87
CSMD1-218ENST00000635120 ZC3H7BQ9UGR2 993 aaKnown RBP9.6□□□□□ -0.87
CSMD1-218ENST00000635120 PP2D1A8MPX8 630 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 TRIM66O15016 1216 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 KCNA3P22001 575 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 COBLL1Q53SF7 1204 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 GLYCTKQ8IVS8 523 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 SIRT2Q8IXJ6 389 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 INPP5DQ92835 1189 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 STAMBPL1Q96FJ0 436 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 ZBED2Q9BTP6 218 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 TBC1D23Q9NUY8 699 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 RBAKQ9NYW8 714 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-218ENST00000635120 USP17L10C9JJH3 530 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 WBP4O75554 376 aaKnown RBP9.6□□□□□ -0.87
CSMD1-218ENST00000635120 KRT72Q14CN4 511 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 CLMNQ96JQ2 1002 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 SPON2Q9BUD6 331 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 FAM217BQ9NTX9 383 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-218ENST00000635120 CHN1P15882 459 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 RRM2BQ7LG56 351 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 TMEM161AQ9NX61 479 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.6□□□□□ -0.87
CSMD1-218ENST00000635120 DALRD3Q5D0E6 543 aaKnown RBP9.6□□□□□ -0.87
CSMD1-218ENST00000635120 SLC44A5Q8NCS7 719 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.6□□□□□ -0.87
CSMD1-218ENST00000635120 PCDHGB4Q9UN71 923 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 IMPDH2P12268 514 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 FCER1AP12319 257 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 GRM4Q14833 912 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 SLC9A5Q14940 896 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 PPP1R18Q6NYC8 613 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 CDR2LQ86X02 465 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-218ENST00000635120 SH2D3CQ8N5H7 860 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 TMEM47Q9BQJ4 181 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 GABBR1Q9UBS5 961 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 IGSF1Q8N6C5 1336 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 VSNL1P62760 191 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 CACNB2Q08289 660 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-218ENST00000635120 CEP95Q96GE4 821 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 E2F8A0AVK6 867 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 ERVV-1B6SEH8 477 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 DEAF1O75398 565 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-218ENST00000635120 MOCS2O96007 188 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-218ENST00000635120 THAP11Q96EK4 314 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 ZNF668Q96K58 619 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-218ENST00000635120 GNAT1P11488 350 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 SESN2P58004 480 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-218ENST00000635120 PTPN12Q05209 780 aaKnown RBP9.6□□□□□ -0.87
CSMD1-218ENST00000635120 EME1Q96AY2 570 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 ADAM33Q9BZ11 813 aa9.6□□□□□ -0.87
CSMD1-218ENST00000635120 SRP68Q9UHB9 627 aaKnown RBP9.6□□□□□ -0.87
CSMD1-218ENST00000635120 COPG1Q9Y678 874 aaKnown RBP9.6□□□□□ -0.87
CSMD1-218ENST00000635120 TPI1P60174 286 aa9.59□□□□□ -0.87
CSMD1-218ENST00000635120 RPS6P62753 249 aaKnown RBP9.59□□□□□ -0.87
CSMD1-218ENST00000635120 GRAMD1AQ96CP6 724 aa9.59□□□□□ -0.87
CSMD1-218ENST00000635120 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.59□□□□□ -0.87
CSMD1-218ENST00000635120 CLCA2Q9UQC9 943 aa9.59□□□□□ -0.87
CSMD1-218ENST00000635120 WDR19Q8NEZ3 1342 aa9.59□□□□□ -0.87
CSMD1-218ENST00000635120 NPHP3-ACAD11A0A0J9YXS1 232 aa9.59□□□□□ -0.87
CSMD1-218ENST00000635120 SUPT3HB4E1H0 165 aa9.59□□□□□ -0.87
CSMD1-218ENST00000635120 TLR2O60603 784 aa9.59□□□□□ -0.87
CSMD1-218ENST00000635120 ABCE1P61221 599 aaKnown RBP9.59□□□□□ -0.87
CSMD1-218ENST00000635120 SPATA4Q8NEY3 305 aa9.59□□□□□ -0.87
CSMD1-218ENST00000635120 IL17RAQ96F46 866 aa9.59□□□□□ -0.87
CSMD1-218ENST00000635120 CACNA1CQ13936 2221 aa9.59□□□□□ -0.87
CSMD1-218ENST00000635120 AKAP10O43572 662 aa9.59□□□□□ -0.87
CSMD1-218ENST00000635120 TAP1Q03518 808 aa9.59□□□□□ -0.87
CSMD1-218ENST00000635120 OLFML2BQ68BL8 750 aa9.59□□□□□ -0.87
CSMD1-218ENST00000635120 PHF21AQ96BD5 680 aa9.59□□□□□ -0.87
CSMD1-218ENST00000635120 KIF12Q96FN5 646 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms