RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 A0A087WWV3 80 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 CASTOR2A6NHX0 329 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 ANHXE9PGG2 379 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 H0Y858 1186 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 GFRA3O60609 400 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 XYLBO75191 536 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 KIF4AO95239 1232 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 SCP2P22307 547 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 YARSP54577 528 aaKnown RBP14.97□□□□□ -0.01
TRIM28-211ENST00000597968 DMP1Q13316 513 aaPredicted RBP14.97□□□□□ -0.01
TRIM28-211ENST00000597968 RAB33AQ14088 237 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 XKR4Q5GH76 650 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 CWF19L1Q69YN2 538 aaKnown RBP14.97□□□□□ -0.01
TRIM28-211ENST00000597968 PHLDB3Q6NSJ2 640 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 CCDC105Q8IYK2 499 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 SLC44A3Q8N4M1 653 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 SNX29Q8TEQ0 813 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 DDX27Q96GQ7 796 aaKnown RBP14.97□□□□□ -0.01
TRIM28-211ENST00000597968 PPP1R10Q96QC0 940 aaKnown RBP14.97□□□□□ -0.01
TRIM28-211ENST00000597968 PHOX2BQ99453 314 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 CLSTN3Q9BQT9 956 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 NTPCRQ9BSD7 190 aaKnown RBP14.97□□□□□ -0.01
TRIM28-211ENST00000597968 DDX19AQ9NUU7 478 aaKnown RBP14.97□□□□□ -0.01
TRIM28-211ENST00000597968 KCND2Q9NZV8 630 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 KIAA1024Q9UPX6 916 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 BACE2Q9Y5Z0 518 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 MYO10Q9HD67 2058 aa14.97□□□□□ -0.01
TRIM28-211ENST00000597968 TTLL13PA6NNM8 815 aa14.96□□□□□ -0.01
TRIM28-211ENST00000597968 NPR3P17342 541 aa14.96□□□□□ -0.01
TRIM28-211ENST00000597968 FGFR3P22607 806 aa14.96□□□□□ -0.01
TRIM28-211ENST00000597968 GRM5P41594 1212 aa14.96□□□□□ -0.01
TRIM28-211ENST00000597968 PTGDRQ13258 359 aa14.96□□□□□ -0.01
TRIM28-211ENST00000597968 C8orf34Q49A92 452 aa14.96□□□□□ -0.01
TRIM28-211ENST00000597968 RILPL1Q5EBL4 403 aa14.96□□□□□ -0.01
TRIM28-211ENST00000597968 DTHD1Q6ZMT9 781 aa14.96□□□□□ -0.01
TRIM28-211ENST00000597968 ANKS3Q6ZW76 656 aa14.96□□□□□ -0.01
TRIM28-211ENST00000597968 BORCS6Q96GS4 357 aa14.96□□□□□ -0.01
TRIM28-211ENST00000597968 B3GALT6Q96L58 329 aa14.96□□□□□ -0.01
TRIM28-211ENST00000597968 MYADMQ96S97 322 aa14.96□□□□□ -0.01
TRIM28-211ENST00000597968 KIF2CQ99661 725 aa14.96□□□□□ -0.01
TRIM28-211ENST00000597968 PAAF1Q9BRP4 392 aa14.96□□□□□ -0.01
TRIM28-211ENST00000597968 CCDC94Q9BW85 323 aaPredicted RBP14.96□□□□□ -0.01
TRIM28-211ENST00000597968 MRPL4Q9BYD3 311 aaKnown RBP14.96□□□□□ -0.01
TRIM28-211ENST00000597968 SMOC2Q9H3U7 446 aa14.96□□□□□ -0.01
TRIM28-211ENST00000597968 SLC2A4RGQ9NR83 387 aa14.96□□□□□ -0.01
TRIM28-211ENST00000597968 ARHGAP28Q9P2N2 729 aa14.96□□□□□ -0.01
TRIM28-211ENST00000597968 KCNH3Q9ULD8 1083 aa14.96□□□□□ -0.01
TRIM28-211ENST00000597968 C2orf16Q68DN1 1984 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 SLC26A4O43511 780 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 B3GAT3O94766 335 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 C8AP07357 584 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 FSHRP23945 695 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 GUCY2CP25092 1073 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 NPTX2P47972 431 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 ECM1Q16610 540 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 UPP1Q16831 310 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 PPM1LQ5SGD2 360 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 NT5DC1Q5TFE4 455 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 PRSS55Q6UWB4 352 aaPredicted RBP14.95□□□□□ -0.02
TRIM28-211ENST00000597968 ALKAL1Q6UXT8 129 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 MTSS1LQ765P7 747 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 SIX5Q8N196 739 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 FLCNQ8NFG4 579 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 KCNN1Q92952 543 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 ACO2Q99798 780 aaKnown RBP14.95□□□□□ -0.02
TRIM28-211ENST00000597968 SEMA4AQ9H3S1 761 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 PTPRHQ9HD43 1115 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 MTRRQ9UBK8 725 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 CDH7Q9ULB5 785 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 DMDP11532 3685 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 MTCL1Q9Y4B5 1905 aaKnown RBP14.95□□□□□ -0.02
TRIM28-211ENST00000597968 PLXNA3P51805 1871 aa14.95□□□□□ -0.02
TRIM28-211ENST00000597968 CACNA1HO95180 2353 aa14.94□□□□□ -0.02
TRIM28-211ENST00000597968 H0YCG3 227 aa14.94□□□□□ -0.02
TRIM28-211ENST00000597968 SYN3O14994 580 aa14.94□□□□□ -0.02
TRIM28-211ENST00000597968 SPATA31D3P0C874 917 aa14.94□□□□□ -0.02
TRIM28-211ENST00000597968 MCF2P10911 925 aa14.94□□□□□ -0.02
TRIM28-211ENST00000597968 KCNE1P15382 129 aa14.94□□□□□ -0.02
TRIM28-211ENST00000597968 RPL9P32969 192 aaKnown RBP14.94□□□□□ -0.02
TRIM28-211ENST00000597968 TOB1P50616 345 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-211ENST00000597968 HTR4Q13639 388 aa14.94□□□□□ -0.02
TRIM28-211ENST00000597968 HYIQ5T013 277 aa14.94□□□□□ -0.02
TRIM28-211ENST00000597968 EEF1DP3Q658K8 133 aa14.94□□□□□ -0.02
TRIM28-211ENST00000597968 SPATA31D4Q6ZUB0 917 aa14.94□□□□□ -0.02
TRIM28-211ENST00000597968 CEP57Q86XR8 500 aa14.94□□□□□ -0.02
TRIM28-211ENST00000597968 FEZF2Q8TBJ5 459 aa14.94□□□□□ -0.02
TRIM28-211ENST00000597968 SPIRE2Q8WWL2 714 aa14.94□□□□□ -0.02
TRIM28-211ENST00000597968 SHDQ96IW2 340 aa14.94□□□□□ -0.02
TRIM28-211ENST00000597968 KMT5AQ9NQR1 393 aa14.94□□□□□ -0.02
TRIM28-211ENST00000597968 AVENQ9NQS1 362 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-211ENST00000597968 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.94□□□□□ -0.02
TRIM28-211ENST00000597968 MAFFQ9ULX9 164 aa14.94□□□□□ -0.02
TRIM28-211ENST00000597968 GDAQ9Y2T3 454 aa14.94□□□□□ -0.02
TRIM28-211ENST00000597968 SMIM28A0A1B0GU29 152 aa14.93□□□□□ -0.02
TRIM28-211ENST00000597968 CCDC169A6NNP5 214 aa14.93□□□□□ -0.02
TRIM28-211ENST00000597968 EDN1P05305 212 aa14.93□□□□□ -0.02
TRIM28-211ENST00000597968 RPL17P18621 184 aaKnown RBP14.93□□□□□ -0.02
TRIM28-211ENST00000597968 PROZP22891 400 aa14.93□□□□□ -0.02
TRIM28-211ENST00000597968 CLCNKBP51801 687 aa14.93□□□□□ -0.02
TRIM28-211ENST00000597968 SMTNP53814 917 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms