RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 NELFCDQ8IXH7 590 aa21.44■■□□□ 1.02
SHKBP1-214ENST00000597396 SCFD1Q8WVM8 642 aa21.44■■□□□ 1.02
SHKBP1-214ENST00000597396 SNX27Q96L92 541 aa21.44■■□□□ 1.02
SHKBP1-214ENST00000597396 LMAN2LQ9H0V9 348 aa21.44■■□□□ 1.02
SHKBP1-214ENST00000597396 RPF1Q9H9Y2 349 aaKnown RBP21.44■■□□□ 1.02
SHKBP1-214ENST00000597396 FAN1Q9Y2M0 1017 aa21.44■■□□□ 1.02
SHKBP1-214ENST00000597396 STYXL1Q9Y6J8 313 aa21.44■■□□□ 1.02
SHKBP1-214ENST00000597396 GRM6O15303 877 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 RHOBTB3O94955 611 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 SMC2O95347 1197 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 ALDH2P05091 517 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 CXCL8P10145 99 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 TNFSF9P41273 254 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 OR1G1P47890 313 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 KRT17Q04695 432 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 DSC1Q08554 894 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 STK4Q13043 487 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 KCNB1Q14721 858 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 ARMCX5Q6P1M9 558 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 COLGALT2Q8IYK4 626 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 SLC39A11Q8N1S5 342 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 MICALL1Q8N3F8 863 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 KIAA0895Q8NCT3 520 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 SPPL3Q8TCT6 385 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 TMEM169Q96HH4 297 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 CXCL16Q9H2A7 254 aa21.43■■□□□ 1.02
SHKBP1-214ENST00000597396 GOLGA6L22H0YM25 854 aa21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 CSPG5O95196 566 aa21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 VCANP13611 3396 aa21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 GARTP22102 1010 aa21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 HOXD13P35453 343 aa21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 UBE3AQ05086 875 aa21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 PPP2R3AQ06190 1150 aa21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 TUSC3Q13454 348 aa21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 BMT2Q1RMZ1 405 aa21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 SLC10A6Q3KNW5 377 aa21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 ZBTB41Q5SVQ8 909 aa21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 NOC3LQ8WTT2 800 aaKnown RBP21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 POF1BQ8WVV4 589 aa21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 SMARCE1Q969G3 411 aa21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 MRPL38Q96DV4 380 aaKnown RBP21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 PRDM6Q9NQX0 595 aa21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 RMND1Q9NWS8 449 aa21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 LMCD1Q9NZU5 365 aa21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 PUF60Q9UHX1 559 aaKnown RBP21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 PRG3Q9Y2Y8 225 aaPredicted RBP21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 MTCH2Q9Y6C9 303 aa21.42■■□□□ 1.02
SHKBP1-214ENST00000597396 PRUNE2Q8WUY3 3088 aa21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 SMIM28A0A1B0GU29 152 aa21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 NRP1O14786 923 aa21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 FAM189A1O60320 539 aa21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 POU3F3P20264 500 aaPredicted RBP21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 ADSSP30520 456 aa21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 ACOT2P49753 483 aa21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 PLCB3Q01970 1234 aa21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 CCDC85BQ15834 202 aaPredicted RBP21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 XKR4Q5GH76 650 aa21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 ALKAL1Q6UXT8 129 aa21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 HS2ST1Q7LGA3 356 aa21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 ELOA2Q8IYF1 753 aaPredicted RBP21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 FAM212AQ96EL1 285 aa21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 PPP1R10Q96QC0 940 aaKnown RBP21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 CBWD1Q9BRT8 395 aa21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 PCIF1Q9H4Z3 704 aa21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 PLEKHA5Q9HAU0 1116 aa21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 SLC38A7Q9NVC3 462 aa21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 CNTN3Q9P232 1028 aa21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 CPSF3Q9UKF6 684 aaKnown RBP21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 TRANK1O15050 2925 aa21.41■■□□□ 1.02
SHKBP1-214ENST00000597396 CASTOR2A6NHX0 329 aa21.4■■□□□ 1.02
SHKBP1-214ENST00000597396 KIF20AO95235 890 aa21.4■■□□□ 1.02
SHKBP1-214ENST00000597396 LDHAP00338 332 aaKnown RBP21.4■■□□□ 1.02
SHKBP1-214ENST00000597396 KCNE1P15382 129 aa21.4■■□□□ 1.02
SHKBP1-214ENST00000597396 ENOX2Q16206 610 aaKnown RBP21.4■■□□□ 1.02
SHKBP1-214ENST00000597396 KNOP1Q1ED39 458 aaKnown RBP21.4■■□□□ 1.02
SHKBP1-214ENST00000597396 TJAP1Q5JTD0 557 aa21.4■■□□□ 1.02
SHKBP1-214ENST00000597396 ERCC4Q92889 916 aaPredicted RBP21.4■■□□□ 1.02
SHKBP1-214ENST00000597396 SAAL1Q96ER3 474 aa21.4■■□□□ 1.02
SHKBP1-214ENST00000597396 IGSF21Q96ID5 467 aa21.4■■□□□ 1.02
SHKBP1-214ENST00000597396 COLEC11Q9BWP8 271 aa21.4■■□□□ 1.02
SHKBP1-214ENST00000597396 LZTS1Q9Y250 596 aa21.4■■□□□ 1.02
SHKBP1-214ENST00000597396 PCDHA5Q9Y5H7 936 aa21.4■■□□□ 1.02
SHKBP1-214ENST00000597396 TTC26A0AVF1 554 aa21.39■■□□□ 1.01
SHKBP1-214ENST00000597396 KIAA0391O15091 583 aaKnown RBP21.39■■□□□ 1.01
SHKBP1-214ENST00000597396 SNRPFP62306 86 aaKnown RBP21.39■■□□□ 1.01
SHKBP1-214ENST00000597396 TIGD5Q53EQ6 642 aa21.39■■□□□ 1.01
SHKBP1-214ENST00000597396 TMEM173Q86WV6 379 aaPredicted RBP21.39■■□□□ 1.01
SHKBP1-214ENST00000597396 GSDMAQ96QA5 445 aa21.39■■□□□ 1.01
SHKBP1-214ENST00000597396 FAM213AQ9BRX8 229 aa21.39■■□□□ 1.01
SHKBP1-214ENST00000597396 TLR9Q9NR96 1032 aa21.39■■□□□ 1.01
SHKBP1-214ENST00000597396 CGNQ9P2M7 1197 aaKnown RBP21.39■■□□□ 1.01
SHKBP1-214ENST00000597396 GOLGA8IPA6NC78 632 aa21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 GOLGA8JA6NMD2 632 aa21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 LACTBL1A8MY62 500 aa21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 TULP1O00294 542 aaPredicted RBP21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 CLIC2O15247 247 aa21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 MEFVO15553 781 aaPredicted RBP21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 TGFB1I1O43294 461 aa21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 EXTL3O43909 919 aa21.38■■□□□ 1.01
SHKBP1-214ENST00000597396 DNAJB1P25685 340 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms