RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 NBR1Q14596 966 aa19.34■□□□□ 0.69
SHKBP1-203ENST00000594298 ANGPT1Q15389 498 aa19.34■□□□□ 0.69
SHKBP1-203ENST00000594298 POTEGQ6S5H5 508 aa19.34■□□□□ 0.69
SHKBP1-203ENST00000594298 PIK3R5Q8WYR1 880 aa19.34■□□□□ 0.69
SHKBP1-203ENST00000594298 TTPALQ9BTX7 342 aa19.34■□□□□ 0.69
SHKBP1-203ENST00000594298 PDZD7Q9H5P4 517 aa19.34■□□□□ 0.69
SHKBP1-203ENST00000594298 FOXD4L1Q9NU39 408 aa19.34■□□□□ 0.69
SHKBP1-203ENST00000594298 CACNG4Q9UBN1 327 aa19.34■□□□□ 0.69
SHKBP1-203ENST00000594298 FBXW11Q9UKB1 542 aa19.34■□□□□ 0.69
SHKBP1-203ENST00000594298 ZFP37Q9Y6Q3 630 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-203ENST00000594298 TTLL13PA6NNM8 815 aa19.33■□□□□ 0.68
SHKBP1-203ENST00000594298 KIF4AO95239 1232 aa19.33■□□□□ 0.68
SHKBP1-203ENST00000594298 BMP15O95972 392 aa19.33■□□□□ 0.68
SHKBP1-203ENST00000594298 THP07101 528 aa19.33■□□□□ 0.68
SHKBP1-203ENST00000594298 CYP11B2P19099 503 aa19.33■□□□□ 0.68
SHKBP1-203ENST00000594298 RPA1P27694 616 aa19.33■□□□□ 0.68
SHKBP1-203ENST00000594298 MAPK6Q16659 721 aa19.33■□□□□ 0.68
SHKBP1-203ENST00000594298 HAUS3Q68CZ6 603 aa19.33■□□□□ 0.68
SHKBP1-203ENST00000594298 PRSS55Q6UWB4 352 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-203ENST00000594298 DTHD1Q6ZMT9 781 aa19.33■□□□□ 0.68
SHKBP1-203ENST00000594298 GET4Q7L5D6 327 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-203ENST00000594298 GLYCTKQ8IVS8 523 aa19.33■□□□□ 0.68
SHKBP1-203ENST00000594298 CLSTN3Q9BQT9 956 aa19.33■□□□□ 0.68
SHKBP1-203ENST00000594298 SLC2A4RGQ9NR83 387 aa19.33■□□□□ 0.68
SHKBP1-203ENST00000594298 ZFHX2Q9C0A1 2572 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-203ENST00000594298 CASTOR2A6NHX0 329 aa19.32■□□□□ 0.68
SHKBP1-203ENST00000594298 ACKR2O00590 384 aa19.32■□□□□ 0.68
SHKBP1-203ENST00000594298 HNRNPA1P09651 372 aaKnown RBP eCLIP19.32■□□□□ 0.68
SHKBP1-203ENST00000594298 NAMPTP43490 491 aa19.32■□□□□ 0.68
SHKBP1-203ENST00000594298 ELAVL2Q12926 359 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-203ENST00000594298 PRPF4BQ13523 1007 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-203ENST00000594298 HTR4Q13639 388 aa19.32■□□□□ 0.68
SHKBP1-203ENST00000594298 NAB2Q15742 525 aa19.32■□□□□ 0.68
SHKBP1-203ENST00000594298 PHLDB3Q6NSJ2 640 aa19.32■□□□□ 0.68
SHKBP1-203ENST00000594298 LNX1Q8TBB1 728 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-203ENST00000594298 BSNDQ8WZ55 320 aa19.32■□□□□ 0.68
SHKBP1-203ENST00000594298 ADPGKQ9BRR6 497 aa19.32■□□□□ 0.68
SHKBP1-203ENST00000594298 CCDC113Q9H0I3 377 aa19.32■□□□□ 0.68
SHKBP1-203ENST00000594298 SNTG2Q9NY99 539 aa19.32■□□□□ 0.68
SHKBP1-203ENST00000594298 LRWD1Q9UFC0 647 aa19.32■□□□□ 0.68
SHKBP1-203ENST00000594298 TDRD15B5MCY1 1934 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-203ENST00000594298 RECQL4O94761 1208 aa19.31■□□□□ 0.68
SHKBP1-203ENST00000594298 MUTP22033 750 aa19.31■□□□□ 0.68
SHKBP1-203ENST00000594298 HOXA9P31269 272 aa19.31■□□□□ 0.68
SHKBP1-203ENST00000594298 FAM171A1Q5VUB5 890 aa19.31■□□□□ 0.68
SHKBP1-203ENST00000594298 PDXDC1Q6P996 788 aa19.31■□□□□ 0.68
SHKBP1-203ENST00000594298 PADI6Q6TGC4 694 aa19.31■□□□□ 0.68
SHKBP1-203ENST00000594298 GPR152Q8TDT2 470 aa19.31■□□□□ 0.68
SHKBP1-203ENST00000594298 HASPINQ8TF76 798 aa19.31■□□□□ 0.68
SHKBP1-203ENST00000594298 ZSCAN16Q9H4T2 348 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-203ENST00000594298 TBC1D17Q9HA65 648 aa19.31■□□□□ 0.68
SHKBP1-203ENST00000594298 CA14Q9ULX7 337 aa19.31■□□□□ 0.68
SHKBP1-203ENST00000594298 NUMBLQ9Y6R0 609 aa19.31■□□□□ 0.68
SHKBP1-203ENST00000594298 CFAP54Q96N23 3096 aa19.31■□□□□ 0.68
SHKBP1-203ENST00000594298 ARHGEF35A5YM69 484 aa19.3■□□□□ 0.68
SHKBP1-203ENST00000594298 STK25O00506 426 aa19.3■□□□□ 0.68
SHKBP1-203ENST00000594298 STX6O43752 255 aa19.3■□□□□ 0.68
SHKBP1-203ENST00000594298 PRKCBP05771 671 aa19.3■□□□□ 0.68
SHKBP1-203ENST00000594298 POU2F2P09086 479 aa19.3■□□□□ 0.68
SHKBP1-203ENST00000594298 FSHRP23945 695 aa19.3■□□□□ 0.68
SHKBP1-203ENST00000594298 ATP2C1P98194 919 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-203ENST00000594298 PPP2R5AQ15172 486 aa19.3■□□□□ 0.68
SHKBP1-203ENST00000594298 PSMD5Q16401 504 aa19.3■□□□□ 0.68
SHKBP1-203ENST00000594298 LIN9Q5TKA1 542 aa19.3■□□□□ 0.68
SHKBP1-203ENST00000594298 ARL6IP4Q66PJ3 421 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-203ENST00000594298 CEP57Q86XR8 500 aa19.3■□□□□ 0.68
SHKBP1-203ENST00000594298 DEPTORQ8TB45 409 aa19.3■□□□□ 0.68
SHKBP1-203ENST00000594298 ARHGEF3Q9NR81 526 aa19.3■□□□□ 0.68
SHKBP1-203ENST00000594298 CDH7Q9ULB5 785 aa19.3■□□□□ 0.68
SHKBP1-203ENST00000594298 TMEM189-UBE2V1I3L0A0 370 aa19.29■□□□□ 0.68
SHKBP1-203ENST00000594298 RFX1P22670 979 aa19.29■□□□□ 0.68
SHKBP1-203ENST00000594298 FOXK2Q01167 660 aa19.29■□□□□ 0.68
SHKBP1-203ENST00000594298 TMEM132AQ24JP5 1023 aa19.29■□□□□ 0.68
SHKBP1-203ENST00000594298 DCAF4L1Q3SXM0 396 aa19.29■□□□□ 0.68
SHKBP1-203ENST00000594298 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-203ENST00000594298 GRASPQ7Z6J2 395 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-203ENST00000594298 ADSSL1Q8N142 457 aa19.29■□□□□ 0.68
SHKBP1-203ENST00000594298 IGSF22Q8N9C0 903 aa19.29■□□□□ 0.68
SHKBP1-203ENST00000594298 CXCL16Q9H2A7 254 aa19.29■□□□□ 0.68
SHKBP1-203ENST00000594298 SEMA4AQ9H3S1 761 aa19.29■□□□□ 0.68
SHKBP1-203ENST00000594298 EDN1P05305 212 aa19.28■□□□□ 0.68
SHKBP1-203ENST00000594298 C8AP07357 584 aa19.28■□□□□ 0.68
SHKBP1-203ENST00000594298 CCT6AP40227 531 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-203ENST00000594298 EFNA5P52803 228 aa19.28■□□□□ 0.68
SHKBP1-203ENST00000594298 RAB33AQ14088 237 aa19.28■□□□□ 0.68
SHKBP1-203ENST00000594298 PPM1LQ5SGD2 360 aa19.28■□□□□ 0.68
SHKBP1-203ENST00000594298 KRT79Q5XKE5 535 aa19.28■□□□□ 0.68
SHKBP1-203ENST00000594298 EEF1DP3Q658K8 133 aa19.28■□□□□ 0.68
SHKBP1-203ENST00000594298 RTL10Q7L3V2 364 aa19.28■□□□□ 0.68
SHKBP1-203ENST00000594298 DLGAP2Q9P1A6 1054 aa19.28■□□□□ 0.68
SHKBP1-203ENST00000594298 MTMR6Q9Y217 621 aa19.28■□□□□ 0.68
SHKBP1-203ENST00000594298 ADAM12O43184 909 aa19.27■□□□□ 0.68
SHKBP1-203ENST00000594298 XYLBO75191 536 aa19.27■□□□□ 0.68
SHKBP1-203ENST00000594298 FGFR3P22607 806 aa19.27■□□□□ 0.68
SHKBP1-203ENST00000594298 UVSSAQ2YD98 709 aa19.27■□□□□ 0.68
SHKBP1-203ENST00000594298 DCLRE1AQ6PJP8 1040 aa19.27■□□□□ 0.68
SHKBP1-203ENST00000594298 KIFAP3Q92845 792 aa19.27■□□□□ 0.68
SHKBP1-203ENST00000594298 PPP1R10Q96QC0 940 aaKnown RBP19.27■□□□□ 0.68
SHKBP1-203ENST00000594298 USP20Q9Y2K6 914 aa19.27■□□□□ 0.68
SHKBP1-203ENST00000594298 SIT1Q9Y3P8 196 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms